Cottoperca gobio: 115015497
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Entry
115015497 CDS
T07513
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4-like isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115015497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgob03036
]
115015497
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115015497
Chromatin remodeling factors
NuRD complex
115015497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
PHDvar_NSD
HDA2-3
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
115015497
NCBI-ProteinID:
XP_029298719
Ensembl:
ENSCGOG00000011371
UniProt:
A0A6J2QN45
LinkDB
All DBs
Position
11:13515599..13543142
Genome browser
AA seq
1986 aa
AA seq
DB search
MSGSEDDRDDYGAPEDRLMHDEEEEEISENETPKVKKKKKAKKSKESKGSKRRSRREELP
ISSPEPMDVGVVEEAAEGTAAQRSDSEGSDYTPGRKKKKRASSGKEKKRSSSGAERSSSK
KKDPEPEEDDDDDDDDNSEPKSSSQLLDDWGMEDIDHVFTEEDYRSLTNYKAFSQFVRPL
IAAKNPKIAVSKMMMVLGAKWREFSTNNPLRGAAAANAALATANVPAAVDTMVAEAAPVV
VAPPPPAEPQQPPPPPLRKAKTKEGKGPNARKKSKPTPKPQDKKNNAKTKKVAPLKIKLG
GFNSKRKRSSSEEDEPEVDSDFEDGSMNSVSVSEGSNSRSSRSKKKPSKSKPKKKKAEDG
DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKEGIQWE
AREEVSEGEEDIVETEIEEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPN
GEWICPRCTCPAIKGKVQKILTWRWGDTPSPTPVPRPPDLAADAPDPSPLVGRPDREFFA
KWSNMSYWHCSWVTELQLELYCQVMFRNYQRKNDMDDPPPIDFAEGQEDKIIKRKSKNPM
YAELEEKYLRFGIKMEWLMIHRIINHSVDRKNNVHYLIKWRELAYDQATWEADDMDVPEF
DTYKVQFWNHRELMMGDEGKPGKKIKVKGRVKRPERPPDNPVIDPTIKFERQPEYLDVTG
GALHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLSSLYKEGHSKGPFLVSAP
LSTIINWEREFELWAPDIYVVTYVGDKDSRAVIRENEFSFEDNATRGGKKASRMKKDSSI
KFHVLLTSYELITIDMAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGT
PLQNNLEELFHLLNFLTPERFSKLEFFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVF
KHMPSKTELIVRVELSPMQKKYYKFILTKNFEALNTKGGGNQVSLLNVVMDLKKCCNHPY
LFPAAAIEAPKIPNGMYDGNALTKAAGKLTLLQKMMRKLKNGGHRVLIFSQMTKMLDLLE
DFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAQQFAFLLSTRAGGLGINLATADTVVI
YDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTHLVVRPGL
GSKTGSMSKQELDDILKFGTEQLFKDEFDGGLGEYKNKEEDSSVIHYDDKAIDRLLDRNQ
EATDETELQSMNEYLSSFKVAQYVVKDEEEEEEEVQREVIKQEESVDPDYWEKLLRHHYE
QQQEDLARNLGKGKRIRKQVNYNDGSQEDRGKNRADWQDDQSDGQSDYSVASEEGDEDFD
ERSEANSRRPNRKGLRNDKDKPLPPLLARVGGNIEVLGFNSRQRKAFLNAVMRYGMPPQD
AFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIG
VMSLIRKKVQEFEHVNGQWSMPWMAELEESKKAAALPDSPGKTPSTGTPADTQPNTPAPV
DDSTSKTEETVKDAEKEVKKEGETEKNGKEPAKISNEVIAIPDDDEKSPAAEQETKKNGE
EPMETDKQSNGETESIKAKEDEKEKEKEGESEKKSPEGGEETKSTPEAKTEGSEVKPEDS
EVKAEEKKEEKMDTTPADEKKADLKEKEPQKPEEATKLQNGDSSKEGGASGAATVAATVA
ATTVATAAGVASEEKKKAAKTRFMFNIADGGFTELHSLWQNEERAATVTKKTNEIWHRRH
DYWLLAGIIQHGYARWQDIQNDVKFAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMSEDPSHPSMALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKV
LKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLASRAPETQTQSQTQSQT
QQMSQQ
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagcgaggatgacagagatgattatggagcccccgaggaccggttaatgcac
gatgaagaggaagaggagatctcagagaatgagactcccaaggtgaagaagaagaagaag
gccaagaagagcaaagagagcaagggcagcaagaggcggtcgcgcagagaggagctcccc
atcagctccccagagcccatggatgtgggcgtggtggaggaggctgcagaaggcaccgct
gcccagcgctctgacagcgagggcagcgactacactccaggacgcaagaagaagaagaga
gccagcagcggcaaagaaaagaagaggagcagttccggggccgagaggagcagctccaag
aagaaagacccggagcccgaggaagatgacgacgatgatgatgacgacaactcggagcca
aagtcgtcctcccagctgcttgatgactggggcatggaggacatcgaccatgtcttcact
gaggaagactaccgctctctcacaaactacaaggccttcagccaatttgtcaggcccctc
atcgcagccaagaaccccaagatcgccgtgtccaagatgatgatggttctgggcgccaag
tggcgagagttcagcaccaacaaccccctgagaggagccgctgctgccaacgcagccttg
gccaccgccaacgtgccggctgcggtcgacaccatggtggcagaggccgcccctgttgtt
gtagcaccgccacccccagcagagcctcagcagccccctccaccgccgctacgcaaggcc
aagacaaaggaaggcaaaggtcctaatgcccgcaagaagtcaaaacctacacctaaacca
caagacaagaaaaataatgccaagaccaagaaagtggctcctctcaaaatcaaactggga
ggcttcaacagcaagaggaaacgctcatcgagcgaggaggatgagcctgaagtggacagc
gatttcgaggacggcagcatgaacagtgtctccgtctcagagggatccaacagccgcagc
agccgcagcaaaaagaagccatccaagagcaaacccaagaaaaagaaagctgaagacggt
gacggatatgagacagatcaccaggactactgtgaagtttgccagcagggtggagagatc
atcctgtgtgacacctgccccagggcgtaccatatggtctgcctggaccccgacatggag
aaagcccccgagggcacctggagctgcccgcactgtgagaaggagggcatccagtgggag
gccagggaggaggtttcagaaggcgaggaggacattgtcgagacagagatagaggaggac
gaccaccacatggagttctgcagagtgtgtaaagacggaggagagctcctctgctgcgac
tcgtgcccctcgtcataccacatccactgcctcaacccgccactcccagagatccccaat
ggagaatggatctgcccccgctgcacgtgtccagccataaaggggaaagtccagaagatc
ctgacatggcggtggggcgacactccatctcccacaccagtcccccgccctccagaccta
gcagctgatgcccccgatccctcgccgctggtagggcggccggacagggagttcttcgcc
aagtggtccaacatgtcgtactggcactgctcctgggtcacagagctccagcttgagctc
tattgtcaggtgatgttcagaaactaccagaggaaaaacgacatggatgatccgccgccc
atcgactttgccgaaggacaggaggacaagattattaagaggaagagcaagaaccctatg
tatgcagagctggaggagaagtacctccgctttggaatcaagatggagtggctgatgatc
caccgcatcatcaaccacagtgtggacaggaagaataacgtccactacctgatcaagtgg
agagagctggcgtacgaccaggcgacctgggaggccgacgacatggacgtaccggagttt
gacacctacaaggtgcagttctggaaccacagagagctgatgatgggagacgaggggaaa
cctggtaagaagatcaaggtgaaaggaagagtgaagcggcccgaacgacctccggacaac
cccgtgatagatccgactataaagtttgagcgtcagcctgaatacctggacgtcacaggg
ggggcgctccacccttaccagctggagggactcaactggctgcggttctcctgggctcag
ggcaccgacaccatcctggccgacgagatgggtttgggaaagacggtgcagaccgcagtc
ttcctctcctcgctctataaagagggccactccaaggggccgttcctggttagcgcccca
ctctctaccatcatcaactgggagagagagtttgagttgtgggcccccgacatttacgtg
gtgacctacgtcggagacaaagacagcagagccgtcatcagagagaacgaattctccttt
gaggacaacgccacccgaggagggaagaaggcctccaggatgaagaaagactcgtcgatc
aagttccacgtcctgctgacctcctacgagctgatcaccatcgacatggcgatcctgggc
tccatagactgggcctgtctggtggtggacgaggcccacaggctgaaaaacaaccagtcc
aagtttttccgggtgttgaacaactaccctctgcagcacaaactgctgctgactggaact
cctctgcagaacaacctggaggagcttttccacctgctcaacttcctcacacctgagagg
ttcagtaaactggagttcttcctggaggagtttgccgacattgcaaaggaagaccagatc
aagaagctgcacgacatgctgggtccacacatgctcaggaggctgaaggccgacgtcttc
aaacacatgccctccaagaccgagctcatcgtcagagtggagctcagccccatgcagaag
aagtactataaatttatcctgacgaaaaactttgaggctctgaacaccaaaggaggagga
aaccaggtttctctgctcaacgtcgtcatggacctcaagaaatgctgcaaccacccctac
ctcttccccgcggccgctattgaagctccaaagattcccaacgggatgtacgatggcaac
gctctcacaaaggctgctgggaaactgacgttgctgcagaagatgatgaggaaactgaag
aacggaggacacagagtgcttattttctctcagatgaccaagatgttggacttgctcgag
gacttcctggagaacgagggctacaagtacgagaggattgacggagggatcactggaggg
atgaggcaggaagctattgatcgcttcaacgctcctggcgctcagcagtttgccttcctg
ctgtcaacaagggctggaggtctgggtatcaacctggccaccgccgacaccgtcgtcatc
tatgattctgactggaacccccacaacgacatccaggccttcagcagagctcatcgtatc
ggtcagaacaagaaggtgatgatctaccgcttcgtcaccaaggcctctgtggaggagagg
attactcaggttgccaagaaaaagatgatgctgactcacctggtggtccggcccggtctc
ggatccaagacgggttccatgtccaaacaggaattggacgacatcctcaagttcggaaca
gagcagctcttcaaggacgagtttgatggcggtctaggtgagtacaagaacaaggaggag
gacagcagcgtcattcactacgacgacaaggccatcgaccgtctgctggacaggaaccag
gaagccacagacgaaacggagctgcagagcatgaacgagtacctgagctccttcaaagtg
gctcagtatgtggtcaaagacgaggaggaggaggaggaagaggtgcagcgggaggtcatc
aagcaggaggagagcgtggatccagactactgggagaagctgctgcgtcaccattacgag
cagcagcaggaagatctggcccgcaacctgggcaaaggcaaacgtatccgcaagcaggtc
aactacaacgacggttcacaggaagaccgaggtaagaacagagctgattggcaggatgac
cagtctgacggccaatcagattactccgtggcatctgaggagggagacgaggactttgat
gagcgatcagaagccaactctcgcaggcccaacaggaaaggcctgaggaacgacaaagac
aaaccgctgccccccctgctggccagggtgggaggcaacatcgaggtgttgggtttcaac
tctcggcagaggaaggccttcctgaatgcagtgatgcgttatgggatgcctccccaagat
gccttcaccacacagtggctggtccgagacctgcgagggaaatctgagaaagagttcaag
gcgtacgtctctctgtttatgcgtcacctctgtgagcccggagccgacggcgccgagacc
ttcgcagacggcgtccccagagaagggttgtcacggcaacacgtcctcacccgcatcggt
gttatgtcactcattcgcaagaaggttcaggagttcgagcatgtgaacggtcagtggtcg
atgccctggatggccgagctggaagaaagcaagaaggccgcggctctgcccgactccccc
gggaaaaccccttccacaggcacccccgccgacacgcagcccaacacacctgctccagtt
gacgactccacctcaaagaccgaggagacagtgaaggacgcagagaaagaggttaagaaa
gagggcgagacggagaagaacggcaaagagcctgcaaagatcagcaacgaggtgatcgcc
atcccagacgacgacgagaaaagcccggcagctgagcaggagaccaagaagaacggggag
gagccgatggagacggacaaacagagcaacggagaaacggagagcattaaagcgaaggag
gacgagaaggagaaggaaaaggagggagagagcgagaagaagagtccagagggaggagag
gaaaccaagtctactccagaggccaagacggaggggtcagaggtcaaacctgaggactcc
gaggtcaaagcagaagaaaagaaagaagaaaagatggacaccactcctgcagatgaaaag
aaagcagatctgaaggagaaggagcctcagaagccggaggaggcgaccaaactgcagaac
ggagacagcagcaaggagggcggagcctcaggggccgccactgttgccgccactgttgct
gccactactgttgccactgcagctggggtcgccagcgaagagaagaagaaggcggccaag
accagattcatgttcaacattgctgacggaggattcacagagcttcactctttgtggcag
aatgaggagcgcgctgccaccgttaccaagaaaaccaatgagatctggcatcgtcgtcat
gactactggctgctggctggcatcatacaacatggttacgctcgttggcaggacatccag
aacgacgtaaagtttgccatcctcaatgagcctttcaagggagagatgaaccgaggaaac
tttctggaaatcaagaacaagttcctcgccaggaggttcaagctgttggagcaggcgctg
gtgatcgaggagcagctgcgtcgtgccgcctacctcaacatgtcggaggacccctcccac
ccctccatggccctcaacacccgcttcagcgaggtggagtgtttggctgagtcccatcag
cacctcagcaaggagtctatgtccgggaacaaaccggccaacgccgtcctgcacaaagtg
ctgaagcagttggaggagctgctgagcgacatgaaggcggatgtcacccgcctcccggca
accatcgcccggataccgccggttgccgtgcgactccagatgtccgagaggaacatcctg
agccggctggcgagtcgagcacccgagacacagacacagtcacagacacagtcacagaca
caacagatgtcgcagcagtaa
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integrated database retrieval system
