Cottoperca gobio: 115015506
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Entry
115015506 CDS
T07513
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cgob
Cottoperca gobio
Pathway
cgob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115015506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115015506
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115015506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
115015506
NCBI-ProteinID:
XP_029298742
Ensembl:
ENSCGOG00000019240
UniProt:
A0A6J2QN64
LinkDB
All DBs
Position
1:11331321..11340959
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AA seq
553 aa
AA seq
DB search
MSAEEADKTTTTDASGGDEEEEWLYGDESESKDDDEEAKLNAAVSAPADASTEDSAEHAT
GNGLASEATGEGEGAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIKT
AGSRPYGQASKMKGVDLDGPGNINGVPVLEADMESFEEKPWRKPGADLSDYFNYGFNEDT
WKAYCEKQKRLRMGLEASTVGSVTSKITVQQGRTGNEKDICVLPIHTSKPDFTSPVSLYK
PVISQVPRISPPQWPGPPPPDMSYYTKTSGTIDVIGGGTATISRVEGRRRHNLEGNNIQV
IAENSDAEPTPAKIPPFFPPGPLPPNIPPPPFLPPPPNVNAAPPLIPPPRLPITVPPPGF
PPPPSGPPPTIIPTLDSHPGGYDGRSVPPYPFPQGAYPPPMAGGVPPPWPPMMDNTKPWD
FYSRREDKREKERERPRERTHEREREREHSPSAMGYTSEEERYRYREYQERGYGERHRER
SSREKEERHRERRHREKEEGRHKSSRSSSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGE
EISADQENQEAME
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggataaaacaaccaccactgatgccagcggtggagatgaggag
gaggaatggctgtatggagatgagtctgagagcaaagatgatgacgaggaagccaaactg
aatgctgctgtcagtgcacctgctgatgcttcaacagaggattctgctgaacacgctaca
gggaatggattggcctctgaggcgacaggtgaaggtgaaggtgcaggcgaggatgttgac
agtgacagcgacagtgatgatgacgatgatgatgtccgcgtcaccatcggagacattaaa
actggagcaccacagtacacaacttatggagctccacctgtcaatctcaacataaagacg
gcaggctcccgaccttatggacaagcctccaagatgaagggagtggatctggatggtcct
ggaaacattaacggggttcctgtgctggaagcggacatggagtcctttgaagagaaaccc
tggaggaagccaggagcggatctgtcagactattttaactacggcttcaatgaagacaca
tggaaggcttactgtgaaaaacagaagagactgcgcatgggcctggaggcctctactgtc
ggctcggtgacgagcaagatcactgttcagcaaggcaggacaggcaatgagaaggacata
tgcgttttgcctattcacacctccaagccagacttcacatctcctgtcagcctgtacaag
cccgttatcagtcaggtccccaggatctctccccctcaatggcccggcccgcctcctccg
gacatgtcctactatacgaagacgagtggtactatagacgtgattggtggagggactgcc
accatcagcagggttgaagggcgacgcagacacaatctagaaggcaacaatatccaggtg
atcgctgaaaattcagatgctgagccgactccagctaagattcccccgttcttccctcct
ggaccacttcctccaaacatacccccacctcctttcctccctccaccaccaaacgtcaac
gctgcacccccactcatccccccacccaggttgcccattactgtccctcctcctggtttt
ccgcctccacctagtgggccccctcctactatcatccccactctggacagtcaccctgga
ggttatgatggacgctctgtgccgccctacccgttccctcaaggtgcataccctccaccc
atggcaggaggtgtgcctcctccatggcccccgatgatggacaataccaaaccctgggac
ttctattcccgcagagaagacaagagagagaaggaaagagaaagacctcgagagaggaca
cacgagcgggagagagagcgggagcacagcccttcagcgatgggctacaccagcgaggaa
gagcggtatcgttaccgcgagtaccaggagcgtggttatggagagcgacatcgtgagcgg
tcgagccgagagaaagaggaaagacacagagagagacggcaccgagagaaagaggaggga
cgccacaagtcctctcgcagcagtagcaggaggcggcacgaaagcgaggagggagacagc
caccggaggcacaaacacaagaagagcaagaggagcaaggagggcaaagaggccggagag
gagatcagtgcagaccaagagaaccaggaggccatggagtag
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