Cottoperca gobio: 115015552
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Entry
115015552 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgob00535
]
115015552
Proteoglycans [BR:
cgob00535
]
Extracellular matrix (ECM) proteoglycans
Others
115015552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
DUF4959
VWA_3
DUF4998
DUF4992
Motif
Other DBs
NCBI-GeneID:
115015552
NCBI-ProteinID:
XP_029298829
Ensembl:
ENSCGOG00000023173
UniProt:
A0A6J2QLN0
LinkDB
All DBs
Position
11:17593615..17737099
Genome browser
AA seq
1874 aa
AA seq
DB search
MSAASRMQFSVRLSLCLLGFVLISLFPQPARGQVSSPRRFRTKILSPTKLHVSWKEPKGQ
FESYKIIYTTQPGGEQKEIQVSKQEAKLLIEDFDPSKEYNFKIIAVSGGQQSKPLQAKHE
AQQSGIKMVQSQTRQDSSVTEENNEISEAEDEFMCKTPAISDIVILVDGSWSIGRINFRL
VRTFLENLVKAFSVEFDKTRIGLAQYSGDPRIEWHLNAHTSKEAVMDAVKNLPYKGGNTL
TGLALTFILENSFKPESGSRPGVPKIGILITDGKSQDDVIPPAQSLRAAGIELFAIGVKN
ADENELKAIASPPEETHVYNVADFSVMSDIVESLTKTVCDRVGELDKEIKGGSQPVLPPT
AVAPPRDLVTSEINARSFRVRWTHAPGQVEKYRVVYYPASGGQPEEKVVQGTENSVELNY
LNSLTEYQVAVFAVYRSSASEALRGSATTLALPMVNDLELFDITHSSMMVRWKIAAGATG
YMILYAPLTEGDPADEKEVKVEDSVNEVELEGLTPATEYTVTVYAMYGEEASDPMTSQQT
TLPLTPARNVRFSDVDHSSTRLTWDSASRKAKGYRIMYVKTNGVQTNEVDVGRVTTWLLR
NLTSLTEYTVGVFAIYNEGEAEAVTDSFTTKTVPDPQDLKSSDISTDSFRVSWQHPSSDI
VLYRLIWTPTDGGDSDEVLVNGDINTYLIKGLSPLTEYEVLLAAIYMNEVESDEVVLVES
TVERMTTVATTTTTTATPRYGVRNMRIDEETTFSVRVAWQAADTRNVRHYRLSYISAKGD
RAEERRTVPIGQSSLVLQPLLSDTEYKVSITPVYPDGDGPTAVRMGRTLPLSAPKNLRVS
EEWYNRFRISWDVPPSPTMGYRVVYQPVSAPRPALETFVGEDVNTMLIVNLLSGTEYSVK
VIASYTTGSSEALSGRAKTLYMGVTKLSAYQVRMNSFCGQWQPHRHASAYRVVIESLLNG
QKQETKLSGGANRHCFNNLKANTQYKMSVYAQLQDGSEGPAVTITEKTLPIPTPAPTTPP
STTPLPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFLKIIRFLYSTTGALDRIGPDGTQ
VAIAQFSDDARTEFKLNSYGDKERLLDAINKISYKGGNTKTGRAIQHVKENIFTAEGGVR
RGIPNVLVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFF
VDDLDAFTMIEEKLVTFVCEAATATCPSVPMSGSTTPGFRMMELFGLVESRYSSVSGVSM
VPGTFNTFPSFHLHSDAFLAQPTRYIHPEGLPSDYTITLLFRLLPNTPEEPFALWEILNK
NNEPLVGVIMDNGGKTLTFFNNDYKGEFQTVTFEGPEIKKLFYGSFHKLHIAVSKTSAKV
VIDCNMVAEKSINAAGNITIDGLEVLGRMVRSRGNKDNSAPFQLQIFDIVCSTSWASRDK
CCELPGLRKEADCPAMPKACTCTQDSKGPPGAVGPPGGPGVRGARGDRGEPGPVGPTGPV
GDTGVPGPQGPQGPQGPSGRSIIGGPGAPGESGQKGEAGQQGAQGGAGRAGATGRDGPAG
TRGLPGKDGPLGRQGSSGTIGTPGAPGAPGNTGPPGKHGELGPPGLLGSKGDKGERGDLQ
STASVQDIARQVCEQLIQSHMARYNSILNHVPSPPVSIRTVPGPPGEPGRQGTPGPQGEQ
GPSGRPGFPGQNGQNGQPGERGQLAEKGEKGSQGVGVQGPRGPAGSPGPQGQGRPGSQGS
SGRPGNPGTPGRPGVPGTVGSAGPPGYCDQNSCVGYNVGEGEDVIDHGAVPAVQLPPNVF
QNYGEVEEDDPYRYYEPNYPAPRPVAPDDPAFDDLELSSPGVHRSSRSLEGEEKRVGPKR
RLKRGAKTLPGLIK
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcctccaggatgcagttctcagtcagactgagcctctgcctgctgggcttc
gttctcatctctctgtttcctcagccagcgcggggtcaagtttcatcgccacggagattt
cgtaccaaaatcctgagccccaccaagctgcatgtgtcgtggaaagagccgaaaggacag
tttgaaagctacaagatcatttacaccacacagccaggtggagagcagaaggagattcag
gtatcgaagcaggaagccaagttgctcattgaggactttgacccatctaaagaatacaac
tttaagataattgctgtgagtggaggacagcagagcaaacctcttcaggccaaacatgaa
gctcagcaatcaggcatcaagatggttcaatcgcagacgagacaagacagcagtgtcacc
gaggagaacaatgagatctcagaagctgaagatgagtttatgtgtaagactccagccata
tccgacattgttattctggtggatggctcctggagtatcggccgcattaacttcaggctg
gtcaggaccttcctggaaaacctggtcaaggctttctctgtggagtttgacaagaccagg
attggcctggctcagtacagcggagaccccagaatcgagtggcatcttaacgctcacaca
tccaaagaggctgtgatggatgctgtgaagaacctgccgtataaaggaggaaacacactg
acaggtctggctctgaccttcatcctggagaacagcttcaaacctgagtctggatccagg
cctggtgttcccaagatagggattctcatcactgacgggaagtcgcaggacgacgtgata
ccccctgcacagagcctgagggcagctgggatagaactgtttgccattggtgtgaaaaac
gctgatgagaacgagctgaaggccatcgcctctcctcctgaggaaactcacgtctacaat
gtggcggacttcagcgtgatgagcgacatcgtggaaagcctcaccaagaccgtgtgcgac
cgagtgggggagctagacaaggagatcaaagggggaagtcaacctgtcctcccacccacc
gctgttgcgccgccccgcgacctggtgacatctgagatcaatgctcgcagtttccgagtg
agatggacccacgcgccgggccaggtggagaaataccgcgtggtctattacccagccagc
ggaggacagccagaagaaaaagtggtgcaggggacagagaacagtgtggagctgaactac
ctgaactctctgacggagtaccaggtggctgttttcgctgtctaccgcagctctgccagc
gaggccctgagaggaagtgctaccacattggccctacccatggtgaacgacctggagttg
ttcgatatcactcacagcagcatgatggttcgctggaagatcgctgccggcgccactgga
tacatgatcctgtacgccccactgacggagggagaccctgcagacgagaaagaggtgaag
gtggaggactcggtgaacgaggtggagctagagggattgactccggccacagagtacacg
gtgacggtttatgccatgtacggagaggaggccagcgaccccatgaccagccagcagacc
acattaccgctgaccccagcgaggaacgtgcgtttctctgacgtggaccacagctccaca
cggctcacgtgggactccgcctccaggaaggccaaaggctaccgcatcatgtacgtcaag
accaacggagtccagaccaatgaggtggatgttggccgtgtgacaacctggttgctaaga
aacctgacctccctgacggagtacacagttggtgtctttgccatctacaatgagggagaa
gctgaggctgtgactgacagcttcaccacaaagaccgtcccagacccgcaggatctgaag
agcagtgacatctccacagacagcttcagggtgtcatggcaacacccgtcctctgatata
gtgctgtacagactcatctggacgcccacagatggaggagacagtgatgaggttctggtg
aacggagacattaacacctacctgataaaaggactcagccctctcacagagtacgaagtc
ctcctcgctgcaatctatatgaacgaggttgagagtgacgaggtcgtcctcgtggagtcc
accgttgaaagaatgaccaccgtcgctacgacaaccaccaccacagcaactcctcgttac
ggagtgcggaacatgaggatcgatgaggaaaccacattcagtgtgcgggtggcctggcag
gctgcggacacgaggaatgttcgacattatcgactgagctacatcagtgccaagggagac
cgagcagaggagaggaggacagtgcccataggtcagagcagcctggttctgcagcctctg
ctgtcggatacggagtacaaagtgtccatcactcctgtttaccctgatggagacggaccg
acagcggtgcgaatgggacgaacgcttcctctctcagctcctaagaacctgcgggtatca
gaggaatggtacaaccgcttcaggatcagctgggatgttccaccttcacccaccatgggc
tacagggtcgtctaccagcctgtgtctgctcccagacccgctctggagaccttcgtggga
gaggacgtgaacaccatgctgatcgtcaacctactgagtgggacagagtacagtgtcaag
gtcatcgcctcctacaccactggatccagtgaggccctttcagggagggccaagaccttg
tatatgggggtgactaagctgagcgcataccaggtgaggatgaacagtttttgcggccag
tggcagcctcaccgacacgccagcgcctacagagtggtcatcgagtctctgctcaacggt
cagaagcaggagacgaagctgagcggaggagccaacagacactgtttcaacaacctgaag
gccaacacgcagtataagatgagtgtgtacgctcagctgcaggacgggtctgaaggccct
gcagtcactattactgagaaaacacttcccatcccaaccccggcaccaaccacgccgccc
tccaccacaccactacccacaatcccccctgccaaggaagtctgtaaggcagccaaagcc
gacctggtcttcctggttgacggttcctggagtatcggtgatgacaacttcctgaagatc
atccgcttcttgtacagcaccaccggagctctggaccggatcgggccagatggcacgcag
gtggccattgcacagttcagtgacgacgcccggactgagttcaaactgaactcatacggc
gacaaggagcgactgctggacgccatcaacaagatctcctacaagggcggaaacaccaag
acaggtcgagccatccagcatgtgaaggaaaacatcttcacggcagagggaggagtgagg
aggggaatccctaacgtcctcgtggtcctcaccgacggccgctctcaggatgacgtcaac
aaggtttccaaagagatgcagatggaagggtacattgtgttcgccatcggctttgctgac
gctgactacggggagctggtgagcatcgccagtaaacccagcgacagacacgtcttcttc
gtggacgacctggacgcctttacgatgatcgaagagaagctggtgacctttgtgtgtgag
gccgccactgccacttgtccgtctgtaccgatgagcggcagcacaacaccaggtttccgt
atgatggaactgtttgggctggtggagagccggtacagcagcgtgtctggcgtttccatg
gtacctggcaccttcaataccttcccctctttccacctgcacagtgatgcttttctggca
cagcctaccaggtacatccatcctgaagggctgccctctgactacaccatcaccctgctg
ttcagactgctgcccaacactccagaggagcccttcgccctctgggagatcctcaacaag
aacaacgagccgctggtgggagtcatcatggacaacggaggaaagactctgacgttcttc
aacaacgactacaaaggagagttccagacggtcaccttcgaagggccagaaataaaaaaa
ctcttctacggcagcttccataagcttcacattgcagtcagcaagactagcgccaaagtg
gtgatcgactgcaacatggtagctgagaaaagcatcaacgcagcgggaaacatcaccatc
gacggactggaagttctgggcaggatggtccgctccagagggaacaaggacaactctgca
ccgttccagcttcagatctttgacatcgtctgcagcacttcgtgggccagcagagacaag
tgctgtgaacttcctggtctgaggaaggaggcagactgcccggccatgcccaaagcctgc
acctgcacccaggacagcaaagggccccctggcgctgttggaccaccaggagggccagga
gtcaggggagccagaggtgatcgcggagagccaggcccggtggggccgactggtccagta
ggtgatacaggtgtaccgggacctcagggaccccaaggaccacaaggaccaagtggacga
tccatcataggcggcccaggtgctcccggagagagtggacagaaaggtgaagctggacaa
caaggagcacagggaggtgctggtagagctggagctacaggcagagatggacctgcaggg
accagaggactgccaggcaaagacggcccactgggcagacaaggttcttcaggaactatt
gggacgccaggagccccaggggccccgggtaacacaggccctccaggaaaacatggagaa
cttggaccaccgggtcttctgggaagcaagggggataaaggtgaacggggggatctccag
tccacagcatcagttcaggacatcgccaggcaggtctgtgagcagctgattcagagccac
atggcacgctacaactccatcctgaaccacgtgcccagtccgccagtgtccatccgcact
gtgccaggaccccccggagagcctggcagacagggaactccagggcctcagggagaacag
ggaccctcaggaagacctggcttcccaggacagaacggacagaacgggcagccaggagaa
agaggtcaattagcagaaaagggtgagaaaggatctcaaggcgttggagtccaaggcccc
cgaggacctgcaggatcccccggtcctcaagggcagggcagacctggcagccaggggtcc
tcagggagacctggaaatcctggaacccctggtcggcctggggtccctggaaccgtcggc
tccgctgggcctccgggctactgcgaccagaactcctgtgtgggctacaatgttggagag
ggtgaggatgtcattgaccacggcgctgtccccgcagtccaactgccgcccaacgttttc
cagaactatggcgaggttgaggaggacgatccctaccgatactacgagcccaactaccca
gctccgcggcccgtggcgcccgacgacccggcgttcgacgacctcgagctgagttctccc
ggcgtccaccgcagctcccggagcctggagggagaggagaagagagtcgggcccaagagg
agactaaagagaggagcgaagacgctgcctggactaattaaatga
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integrated database retrieval system
