Cottoperca gobio: 115015617
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Entry
115015617 CDS
T07513
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115015617 (trim71)
04121 Ubiquitin system [BR:
cgob04121
]
115015617 (trim71)
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115015617 (trim71)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115015617 (trim71)
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115015617 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
TEN_NHL
zf-RING_5
zf-C3HC4
zf-RING_2
Ig_GEX2_N
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
115015617
NCBI-ProteinID:
XP_029298952
Ensembl:
ENSCGOG00000002807
UniProt:
A0A6J2QNR8
LinkDB
All DBs
Position
11:1554165..1586064
Genome browser
AA seq
830 aa
AA seq
DB search
MASFPESDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSSQTTRRLHVLPCLHAFCR
QCLEGQRSPGDPLKLRCPTCDQKVCISEAGVDSLPSSNFLFSNLLDVVVSSEEHIQNKNG
HHHRGGLGGGSSGFHHPRRGLLHPNHLGEPQCSSCDEENPATSHCLDCQEYLCDNCVRAH
QRVRLTKDHFIERLRENLHLGRINVNHNPGKPGVSVSLTQSLQNNFSLLSLFQDHMSFCQ
HHDNEVFLFFCESCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLSDAQQGRQAV
QLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKSLYL
QVEKLHQSLTKLDSTIAAVSQVLDEGRHLDVLLARERMLTQIHELKALWGLLQAQEDDRF
MFTPPDQALHIAIQSMGLISSGAFATVTKAHGEGLKTALCGKPASFTVIGYDHDGEPRLS
GGDTVSAIVMAVTDSNLSTVEVMDHQNGSYTVSYLPKCEGEHLVSVLVCNQHIQGSPFKV
IVKSGRSYGALGSQVSSFGNEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFKPCGA
FHRKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKNG
QFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNHE
DHLVVTDFNNHRLLVIRPDCQSARFLGSEGIGNGQFLRPQGVAVDQENRIIVADSRNHRV
QVFEPNGNFLCKFGTQGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttccagagtcggacctgcagacctgcccactctgcaaggagctgtgtggc
tcctctgctcctatttcttccagctcttctacctcttcatcttcctcacatacgtcgtcc
tcctctagccagaccaccaggaggctccacgtcctgccctgcctccatgccttctgcagg
cagtgcctagagggccagcgtagtcccggggacccactgaagctgcgttgccccacctgc
gaccagaaggtgtgcatctcggaggccggagtggactccctgccttcctccaacttcctc
ttcagcaacctgctggacgtggtggtgagctctgaggagcacattcagaacaagaatggc
caccaccaccggggaggcttaggtggaggttcctctggcttccatcaccctcgtagaggc
ctgcttcaccctaaccacctgggagagcctcagtgcagctcctgcgacgaggagaaccca
gccacctcccactgccttgactgccaggagtatctgtgtgacaactgtgtgcgggcacac
cagagggtgcggctgaccaaagaccatttcatcgagcgcctgagagagaacctccacctg
ggccggatcaacgtcaatcacaatccaggcaagccaggggtgtcggtatccctcacccag
tctctgcagaacaacttttccctgctgtccctgttccaggaccacatgagcttctgccaa
caccatgacaatgaggtgtttctgttcttctgtgaatcctgctcggtgcctatctgtcgg
gagtgcagtgtgggccgtcatatgggccacaccttcgtttatttacaagatgctgtacag
gactgcagggccatcaccatccagctgctgtcggatgctcagcagggacgtcaggcggtg
cagctaagcatggagaaggtccaggccatggcagaacaggtggagatcaaagccaaggtg
gtgcagacggaagtgaaggcgcttgtgctcagacacaagaaagctctggaggagagggag
tgtgaactactgtggaaggtggagaaaatccgtcaggtgaaggccaagtctttgtacctg
caggtggagaaactgcaccagagtctgaccaagttggacagcaccatcgctgctgtcagc
caggtgctggatgagggccgccacctcgacgtgctgctggccagagagcgaatgctcacc
cagatccatgaactcaaggctttgtggggcctcctgcaggcgcaagaggacgaccggttc
atgttcactcctccagaccaggctctccacatagccatccagtccatgggcctcatcagc
agcggagcctttgccactgtcaccaaagcccacggtgagggtctaaaaactgcgctttgt
ggcaagcccgcctccttcactgtgattggatatgaccacgatggcgagccacgcctttcc
ggcggggacacggtgtctgcaatagtcatggcagtcacagacagtaacctgtccacagtg
gaggtgatggaccaccagaatggctcgtacaccgtcagctacctgcccaaatgtgagggg
gagcacctcgtgtcggtgctggtgtgtaaccagcacatccagggcagccccttcaaggtg
atcgtgaagtcagggcggagctacggcgccctgggctcccaagtgtcgtccttcgggaac
gagggggagggagatggtcagctgtgtcgtccctggggcatcagcgtggacaaggaggga
tacgtggtggtggccgatcgcagcaacaaccgcatacagatattcaagccttgcggtgcc
ttccaccgtaagtttggctctctgggttctcggcccggtcagtttgatcgtccggcgggg
gttgcctgtgacagtcagagacgaatcattgtggctgataaggacaatcaccgtgtgcag
gtgtttacttttgagggccagttcctgctgaagtttggggaaaagggtaccaagaacggg
cagttcaactatccctgggatgtggctgtcaactctgagggtaagatcctggtctcagac
accaggaaccaccgcgtgcagctcttcgcccctgacggctctttcctgaacaagtacggc
tttgagggggccctgtggaaacactttgactctcccagaggagtggcctttaaccacgaa
gaccacctggtggtgaccgacttcaacaaccacaggctcctggtcatccggccggactgc
cagtcggctcgctttctgggctccgagggcattgggaacgggcagttcctgcggccccag
ggcgtcgccgtggaccaggagaaccgcatcattgtggccgactcccgcaaccacagagtc
caagtgttcgagcccaatggaaacttcttatgcaaatttggcacacaggggagtggcttc
ggacagatggatcgcccctccggtgtggctgtgacgcctgacggagtcattgtggtcgtt
gactttggaaataatcgcatcctcaagttctaa
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