KEGG   Cottoperca gobio: 115015629
Entry
115015629         CDS       T07513                                 
Name
(RefSeq) collagen alpha-2(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
cgob  Cottoperca gobio
Pathway
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04518  Integrin signaling
cgob04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115015629
   04518 Integrin signaling
    115015629
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115015629
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115015629
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cgob00535]
    115015629
Proteoglycans [BR:cgob00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   115015629
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 115015629
NCBI-ProteinID: XP_029298968
UniProt: A0A6J2QKP7
LinkDB
Position
11:2895554..2910211
AA seq 691 aa
MAALSALLKTWVILQTLCLALAQVRGPPGPQGQSGQPGPSGTPGSDGIDGEKGPPGGPGS
PGLKGEPGESGPNGAAGENGIDGLIGAKGDRGPIGSAGPKGHPGPSGEPGPPGPGLPGLA
GAPGPIGLPGEIGLSGSKGFMGTPGAGGLPGPPGKPGPPGKFIGGEEGSADFQCPLNCPA
GPKGPQGLQGVKGHKGRAGVLGEPGSIGKSGPRGEFGISGEQGIPGPPGPMGLRGYPGMM
GPKAEAGPRGYKGINGPVGIAGPPGEEGPKGPPGEAGDKGDKGNRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGIPGIKGGPGQAGMPGPPGPQGSAGLPGGPGSKGGPGFKGEPGPRGHV
GMQGASGPLGEPGLPGEAGMEGVPGFKGDRGQRGAVGLQGIVGKAGGNGERGPMGVPGAQ
GLSGTKGDKGFQGKVGSKGDDGDPGVEGLAGEPGEKGLSGEPGPKGQQGISGDSGHNGPT
GDSGKPGDQGPSGLPGPRGLNGERGVPGMPGIQGSPGRDPSDQHIIEVVLKMLQERLARV
AVSAKRAVLGGAGVMGPPGPPGPPGSPGPQGPHGLPGSRGIPGMFGGHGQIGNTGLKGKR
GAKGDRGDPGKPHPGAPGPPGIQGPSGVDGVARDGKHGERGPQGSAGEAGYPGKAGSAGL
PGLCEAAMCLAASAYTSPRLQEAGTIKGPNI
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggctgcgctctctgccttgctgaagacctgggtaattctgcagaccttgtgcctggct
ctggcccaagtgaggggtccacctggacctcagggccagtccggccaaccaggcccctct
ggcacccctggctcagatggcattgatggagaaaaaggaccgcctgggggccctggttca
ccaggacttaagggggagcctggagagtcaggtccaaacggagcagcaggagagaatggc
attgatggtttgattggagcaaagggtgatcgaggtcctattgggagcgctggccccaag
ggtcatcctggaccaagtggggaacccggacctcccggacccggccttccaggactcgct
ggcgctccagggccaattggtcttccaggtgaaattggattatctggatcaaagggcttc
atgggaacacctggagccggaggacttcctggacctcctggcaagccaggtcctccaggg
aagttcattggtggagaagagggaagtgcagacttccagtgtcctctcaactgtccagct
ggacctaaaggcccccagggattgcagggagtcaagggacacaaaggacgtgctggtgtt
ctcggagagcctggtagcataggaaaatcgggtcccaggggagaattcggcatctctggg
gaacagggcatcccaggacctccgggtccgatgggtctgagaggttatccaggaatgatg
ggtcctaaagcggaagcagggcctcgtggttacaagggcatcaacggacctgtaggaatt
gctgggcctcctggtgaagagggacccaagggaccacccggagaggcaggagacaaggga
gacaaaggcaaccgaggtatccagggcccacagggtgcggttggcaagaagggagagaat
ggtctgccgggtattgatggaaaggatggcacacctggtattcctggaatcaagggcggc
cccggccaggctgggatgcctggtcctccaggtcctcagggatcagcgggattgcctggc
ggcccagggtctaaaggtggacctggatttaagggcgagcctggacctcggggtcacgtc
ggcatgcaaggtgcctccggacctctgggtgagcctggtcttcctggtgaggctggtatg
gaaggcgtccctggattcaagggggacaggggccagcggggagcagtcgggctacaggga
atagtcggcaaggctggaggcaatggagagagaggaccaatgggcgttccaggtgcccag
ggtcttagtggaaccaagggagacaagggtttccaaggaaaagttgggtcaaagggagac
gatggagacccaggtgttgagggattggctggcgaaccaggagaaaagggtttgtctgga
gaacccgggcccaaaggacagcaaggaatcagcggtgactctggacacaatgggcccact
ggagactctggtaaacctggagaccagggaccatcagggctgcccggtcccaggggactc
aatggagagcgaggagtacccggcatgccaggtattcaggggtcaccggggcgcgatcca
tctgaccagcatattatcgaggtggtgttgaagatgttgcaagagaggctagctagagtg
gcggtgagcgccaagagggcggtgcttggtggagcaggtgtaatgggacctcccgggccc
cctggacctccgggctcacctggccctcaggggccacatggcttacctggttcccgtggc
attcctggcatgtttggaggacacggacagattggaaacacaggacttaaaggaaagaga
ggggcaaagggagacagaggagatcctggtaaaccccatccaggagcaccaggaccccca
ggaatacaaggtccctctggcgtcgatggcgtggctcgtgacggtaagcacggtgagaga
ggaccccagggatcagccggagaggctggttatcccggtaaagcgggttcggcaggtctt
ccaggcctttgcgaggcggcgatgtgtctggccgcgtcagcgtacacctccccgagacta
caggaagcgggcacgatcaaaggacccaatatctag

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