Cottoperca gobio: 115015778
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Entry
115015778 CDS
T07513
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
cgob
Cottoperca gobio
Pathway
cgob03250
Viral life cycle - HIV-1
cgob03272
Virion - Hepatitis viruses
cgob04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115015778 (pdcd6ip)
03272 Virion - Hepatitis viruses
115015778 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115015778 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115015778 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115015778 (pdcd6ip)
Membrane trafficking [BR:
cgob04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
115015778 (pdcd6ip)
Exosome [BR:
cgob04147
]
Exosomal proteins
Proteins found in most exosomes
115015778 (pdcd6ip)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
AAT
COG3_N
Motif
Other DBs
NCBI-GeneID:
115015778
NCBI-ProteinID:
XP_029299183
Ensembl:
ENSCGOG00000017809
UniProt:
A0A6J2QLB6
LinkDB
All DBs
Position
11
Genome browser
AA seq
881 aa
AA seq
DB search
MATFISVPLKKSSEVDLVKPLTKFVTATYPAGEEQGEYIRAVEELNKLRRNALGRPLDKH
ESSLEILLRYYDQLCSVEPKFPFSENQLCLIFTWKDAFDKGSLFSGSVKLALASLGYEKT
CVLFNAAALASQIASEQNLDNDEGLKTAAKYYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGTLSLIMLAQAQEVFFLKATSDKMKDAVIAKLANQAADFYGDAFKQCQYKDNLPKYF
YFQEVLPVLAAKHCIMQANAELHQSILAKQKKRFGEEIARLQHAAELVKTVASRYDEYVS
VKDLTEKINRALTAAKKDNDFIYHDRVPEVKDLEHIGKAALVKATAITPPLSQKFTDLFE
KMVPMAVQQSMSIYNQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IAEKARAVVQLGGLQSIEQLIRDLPELLTRNREILDEALKMLDNEEATDNELRSKFNQRW
NRTPSGDLYKPLRAEGGNFRNILDKAVQADQVVRDRYNAHCDMITLLCKPENELNAAIPS
ANPTKTLQGSEVVNVLRSQLAQLDEMKKERETVEGEIKAVTFDMSTNFLTALAQDGAISE
EQLSLSQLDQLYGAYNQRVQTTLRTQEELLGQVQTSHQEFSSLKQSNTEANQREEVLKKL
ASAHDSYVEISNNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPNFNVPAYQVNPAGSAGGPTPAPRTVFAQQPQQAQQQPQAKPLPPARPPPPSFTPQA
ASPIPTNAPATGPPNSNPPPVAPPSQAQGPPYPSYPGYFQMPMGYPYAYGQYNMPNMPNM
PYMPYQQAPGQGGYPAAPPAGQPYPGYPQQPPQQHPYYPQQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttcagtcccgttaaaaaagtcctctgaggtggatctggtgaaaccg
ctgacaaaatttgtaacagccacatacccagcaggcgaggaacagggggagtatatccgc
gccgtggaggagttgaacaagctccgcaggaacgcgctgggaaggccgctggacaaacat
gagagctccctagagatcctgctcagatactatgaccaactttgttctgtcgagcccaag
tttcccttctctgaaaaccagctctgcctaatcttcacatggaaggatgcctttgataaa
ggatcgctgttcagtggctcagtcaagctcgctttggcgagtttgggctacgagaagacg
tgcgtgttgttcaacgcagcagcgctggccagtcagatcgcctcagagcagaacctggac
aacgatgagggactgaagactgcagccaaatactatcagctggccagcggagcgtttggc
cacatcaaggacacggtgctgtcagcgttgaacagggagcccaccatggacatctccccc
gagactgtgggcaccctgagcctcatcatgctggcccaggcccaggaggtgttcttcctc
aaagccacctcagacaagatgaaagatgctgtcatcgcaaagctggccaatcaggcagca
gatttctacggcgacgccttcaagcagtgccagtacaaagacaaccttcccaagtatttt
tattttcaggaagtgctgccggtgctggcggccaagcactgcatcatgcaagccaacgct
gagctgcaccagagcatcctggccaagcagaagaagcgctttggagaagaaatcgctcgc
ctgcagcacgcagcagagttggtgaagacggtggcgtctcgttacgacgaatatgtgagc
gttaaggacctgactgaaaaaatcaaccgagccctcaccgcagccaagaaagacaatgac
tttatctatcacgaccgcgtgcctgaggtcaaggatctggaacacattggcaaggcagcg
ctggtcaaagccaccgccatcacacctccactcagccagaaattcacagacttgtttgag
aagatggtccccatggcggtgcagcagtccatgagcatttacaaccagaggaaggctgag
actgttaacagactggtgggaacgatgagggaggccaccaatctgtgcaacggtgtgttg
gcatccctaaacctgccagctgctctggaggacctttcaggagattctatcccacaatcc
attgctgagaaggcccgagccgtcgtgcagctgggaggactgcagagcatcgagcagcta
atcagagatctacctgagcttctgacgcgcaacagagagatcctggacgaggctctgaag
atgctggacaatgaagaggcgacagacaacgagctgagaagcaagttcaaccagcgctgg
aacagaaccccctctggagacctctacaagccccttcgtgcagagggaggtaatttccgc
aacatcttggacaaggctgtacaggcggaccaggtggttagggaccgctacaacgcccac
tgtgacatgatcaccctgctgtgtaaaccagagaacgagctcaatgctgccatcccctcc
gccaacccaaccaagacactgcagggcagcgaggtagtgaacgtgctgcgctcccagctc
gctcagctggacgagatgaagaaggagagggagaccgtggagggagagatcaaggctgtg
acctttgacatgtctaccaacttcctgacggcgctcgcccaggacggggccatcagcgag
gagcagctgtcactctcccagctcgaccagttgtacggcgcctacaaccagagggtacag
accacgctccgcacacaggaagagctgctgggacaagttcagacgtcccaccaggagttc
agcagtctgaaacagtccaacacggaggccaaccagagggaggaggtcctgaagaagctg
gcttcagcccatgacagctacgttgagatcagcaacaacctgcgcgaaggcacaaagttc
tacaacgacttgacagaaatcctgcttaagttccagaacaaatgcagcgacatcgttttc
gctcgcaaaacagagcgggatgaactacttaaggacctgcaacagagcatcgcacgagag
cccagtgctccaaacttcaacgttcctgcctatcaggtcaacccggcgggctccgctggt
ggcccaacccctgcaccgaggaccgtctttgcccagcagccgcagcaagcccagcagcag
ccccaggcaaagcccttgcccccagccaggcctcctccaccaagcttcacacctcaggct
gcctcccccattcccaccaatgcacccgccactggccctcccaacagcaacccaccacct
gtggccccaccatcccaggcccagggaccaccttaccccagctatccaggatacttccag
atgcctatgggctatccctacgcttacggccagtacaacatgcccaacatgcccaacatg
ccgtacatgccctaccagcaggctccaggacagggaggttaccctgcagctcctcccgct
ggacagccctaccctggctacccccagcaaccccctcagcagcatccctactaccctcag
caataa
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