Cottoperca gobio: 115016133
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Entry
115016133 CDS
T07513
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cgob
Cottoperca gobio
Pathway
cgob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115016133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115016133
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115016133
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115016133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
7tm_6
Motif
Other DBs
NCBI-GeneID:
115016133
NCBI-ProteinID:
XP_029299661
Ensembl:
ENSCGOG00000010909
UniProt:
A0A6J2QPK9
LinkDB
All DBs
Position
11:complement(14348838..14376723)
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AA seq
937 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEDRIEELKKFIERHRHHIRM
LETILRMLDNDSVQVDAVRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEELTQTLVATS
PPGQLEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSPVKNG
NPSSSLSSSSSSSSSSSSSSCSSSSSVSGLTPSSLVSMVAITGGGLGGTGGNSHHGSLGG
LLSNTSAGSYSNATQQQPHPLAQQQQAKSLVSSTPSAPISIPMTSINSHLVSSASSPPNA
ITQGLFTSNSQSQCLSGPTQSSNSLGLSLGLSLGKGGMSIPTSSMSGSLGLSGMPASLST
MASLLSGSTPAPYAQAASSGAIGSGLPGSLGGIGINPTTTNSAVGSIGSGSITVGGPTSS
TGGLLGPAPGLSSIGSGILGLGSSQSGMQGSSLMSLSPVGGLAPGSGVGVIGSNGGSSGS
AVSGVVGGNLSLSVRPPSQQKQNGSTSYSAVLADSTTDSALTSVSQSLSSQPSCLTSTAN
QPKDTGPSLLGSICLSSSSPSQAFYSEAKTVSSGSLLNGPLSYSQSSDSIKPQETLSSLK
SMAERAALSSGMEGDVPSLHLTPVSLSCLSSDIFPSSTTGPSGPPSAPQLSLSEVSIPPS
LGVCPLGPVPLSKDQLYQQAMEEAAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPH
SDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTIT
DEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggtgaaatagatcgatgtctgaaaaaagtagcggag
ggcgtggaacagtttgaagacatttggcaaaagcttcacaatgcagcaaacgcaaaccag
aaggaaaaatatgaagcagacctcaaaaaagagattaaaaagctacagcgtcttcgagac
cagatcaagacgtgggttgcatccaacgagataaaagacaaaaggcagctagtagagaac
cgcaaactcatagaaacgcaaatggagcggttcaaaattgtggagagagaaaccaagacg
aaagcgtactcaaaagaagggctgggtctggcccagaaggtggacccggcccagaaagag
aaggaggaggtcggcacgtggctaacgaatactatagacacgttgaacatgcaggtggac
cagtttgagagcgaagtggagtctctttcagtccagacgaggaaaaagaaaggagacaaa
gaggatcggattgaggagctgaagaagttcattgaaagacatcgtcaccacatccggatg
ctggagaccatactgaggatgctggacaacgactcggtgcaggtggacgccgtcaggaag
atcaaggatgatgtggagtattatgtggactcgtcgcaggatccggactttgaggagaac
gagtttctgtacgacgacctggacctggaagaactcactcagacgctggtcgccacctcc
ccgcccggacaattggaggacgagatcttccagcactccagcagcacgcccacctccacc
acctcatcttcacccatccccccctcgcctgccacttgcactacagagaactcagaagat
gacaagaagaggggacgttcaacagacagtgaggtgagtcagtcaccagtgaagaatgga
aacccctcttcctcattatcctcttcctcctcctcctcctcttcctcctcctcctcctcc
tgctcttcttcttcctccgtctcgggactgaccccatcctcacttgtttctatggtggcc
atcacggggggaggacttggcggcactgggggcaacagtcatcacggcagcttggggggt
ctcctctccaacacgtcagctggcagctacagcaacgccacccagcagcagccgcacccg
ttggcacagcaacagcaggccaaaagcttagtgagctccaccccttcagctcctatctcc
atccccatgacctccatcaacagccacctggtctcctctgcctcttctcccccaaacgcc
atcacacaggggctcttcacttcaaactcccagtcccagtgtctgtcggggcccacccag
tcctccaacagcctcggcctcagcctgggcctctcgctggggaaaggcggcatgtccatc
cccaccagctcgatgtccgggagccttggcctgtcagggatgccggcatccctgagcacc
atggcgagcctcctgtccggctccaccccggcaccctacgctcaggcagcctcctcaggt
gcaatcggctccggcctgccaggctctctgggcggcatcggcatcaaccccacgacgacc
aacagcgcagtaggctccatcggaagtggaagcatcacagtcggcgggcctacgtcctca
actggaggtctgctgggcccagcgccggggttgagcagcatcggctctgggattcttggt
ttgggttccagtcagtcggggatgcagggctcctccctgatgtcgctgagcccagttgga
ggattagcgccgggtagcggagtcggagtcatcgggagcaacggaggcagctcaggatca
gcagtgagcggagtggtgggaggaaacctgtcgctctccgtcaggccgccgagccagcag
aagcagaatggtagcactagttacagcgctgtgttagcagacagcacaacagactccgcc
ctcaccagtgtcagccagtcactaagcagccaaccctcgtgtttgacctccacagccaat
cagcctaaggacactggtcccagtttactgggctccatttgtttgtcgtccagctccccg
tcgcaggccttttacagcgaagccaaaacggtgagcagcggcagcctgctgaacggtcca
ctgtcctactcacagtcctcagacagcatcaagccccaggagactctgagcagcctgaag
tccatggccgagcgagcagcactcagctcagggatggagggagacgtgccctccctgcac
ctcacgccagtctccctctcctgtctctcttcagacatcttccccagcagcactacgggc
ccctcgggccccccgtcagcacctcagctctcgctgtcggaggtcagcatccccccgtca
ttgggggtgtgcccgctggggccggttcccctctccaaagaccagctctaccaacaggcc
atggaggaggcggcgtggacgcacatgccccacccgtccgactccgagaggatcaggcag
tacctgatgaggaacccgtgccccaccctgcctttccaccaccaggtgccaccgccccac
tccgacactgtagagttttaccagaggctttccaccgaaaccctcttcttcatcttttac
tacttggagggcactaaggcccagtatctggcagccaaagccctgaagaagcagtcatgg
aggttccacacaaagtacatgatgtggtttcagaggcacgaagaacccaagaccatcacg
gacgagtttgagcagggaacgtacatttactttgactatgagaaatggggccagcgcaag
aaggaaggcttcacgtttgagtatcggtacctagaagaccgagatctccagtga
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