Cottoperca gobio: 115016426
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Entry
115016426 CDS
T07513
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115016426 (vldlr)
Membrane trafficking [BR:
cgob04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115016426 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
SGL
cEGF
Motif
Other DBs
NCBI-GeneID:
115016426
NCBI-ProteinID:
XP_029300008
Ensembl:
ENSCGOG00000001657
UniProt:
A0A6J2QNM5
LinkDB
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Position
12:complement(3773057..3817265)
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AA seq
864 aa
AA seq
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MITSTLGILLLPMLICLQYCIHVHGTKTECEASQFQCGNGRCIPSVWQCDGDEDCTDGSD
ENSCVRKTCVEVDFVCRNGQCVPKRWHCDGEPDCEDGSDESVEICHMRTCRVNEFSCGAG
STQCIPIFWKCDGEKDCDNGEDEVNCGNITCAPNEFTCASGRCISRNFVCNGEDDCGDAS
DEVECAPSSCGPSEFQCGNSSCIPASWVCDDDVDCQDQSDESPARCGRHPTPPAKCSSSE
MQCRSGECIHKKWRCDGDPDCKDSSDEANCPVRTCGPDQFKCDDGNCILGSRQCNGLREC
SDGSDEVNCKNMTQCNGPEKFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNLNECLQN
NGGCSHICKDMVIGFECDCTPGLTLIDHKTCGDINECMNPGICSQICINLKGGYKCECHN
SYQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNTVALDADFGQQMI
FWADLGQRAIYSTVLDKRGDAGTHNKVIDNVQTPVGIAVDWIYKNLYWSDLSTKTISVAN
FNGTKQKVLFNRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQW
PNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSEYLAHPFALTVFEDRVFWTD
GENEAIYGANKFTGSDVVTLASNLNDPQDIIVYHELIQLSGANWCAEKGENGGCSYMCLP
APQINKHSPKYTCMCPDGQELSADGLRCRPDRSAKDSSKDNGKALIQPPPEANVSTSIQV
NATARGSAAAWAILPVLLLAMAAAGGYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLNIDI
TRHGANVGHTYPAISIVSTEDDLS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtctacactgggaatccttctgctgccgatgctaatatgtctccagtactgc
atacacgtccacggtactaagacggaatgtgaggccagccagtttcagtgtgggaacggt
cgctgcatcccgtccgtctggcagtgcgacggagacgaggactgcaccgacggcagtgac
gagaactcctgtgttagaaagacttgtgtggaggtggacttcgtttgtcgcaacggccaa
tgtgtcccgaagcgatggcactgtgatggggagccggactgtgaggacgggtctgacgag
agcgtagaaatctgccacatgaggacgtgtcgtgtgaacgagtttagctgcggcgcaggc
tccactcagtgtatccccatcttctggaaatgtgacggagagaaggactgtgacaatgga
gaggacgaagtcaactgtggtaacatcacctgcgctccaaatgagttcacgtgtgcgagc
ggccgctgcatctcccggaactttgtgtgtaacggagaggacgactgtggtgacgcctcc
gatgaggtggagtgcgcgccatcttcctgcggtcccagtgagttccagtgtggaaactcg
tcgtgcatcccggccagctgggtgtgtgatgatgacgttgactgccaggatcaatcggat
gagtctccggctcgttgcggccgtcacccgacaccgcctgccaagtgttcgtccagtgag
atgcagtgccgctcaggagagtgtattcacaagaagtggaggtgtgatggtgacccggac
tgcaaggacagcagcgacgaagccaactgtcctgtacgcacttgtggaccggatcagttc
aaatgtgatgatggaaactgtatcctgggcagcagacagtgtaacggcctcagagagtgc
tctgatggatcagacgaagtcaactgcaaaaacatgactcagtgtaacggaccagagaag
ttcaagtgtcgcagcggcgagtgtatcgagatgagcaaagtgtgcaacaaggcacgagac
tgtcccgactggagcgacgaacccatcaaggaatgcaatctaaacgagtgtctccagaac
aacgggggctgctcccacatctgcaaggacatggtgattggctttgaatgtgactgcaca
cctggacttacactcatagaccacaagacctgcggagacatcaatgagtgtatgaacccc
ggcatctgcagtcagatctgcatcaacctgaagggcggatacaagtgcgaatgccacaac
agctaccagatggatccgactactggagtctgcaaagctgttggtaaggaaccctgcctg
atcttcactaaccgtcgtgacatccgtcgcctgggtctggagaggaaggagtacactcag
attgtggagcagcagaggaacacagtggctctcgatgcagactttggccagcagatgatc
ttctgggctgacctgggccagagggccatttacagcactgtgctcgacaaacggggagat
gccggcacccacaacaaagtgatcgacaacgtccagactcctgttggcattgctgtggac
tggatctataagaacttatactggtctgatctcagcaccaaaactatttctgtagccaac
ttcaatggaacgaagcagaaagttctgttcaacagaggcctcaaagaaccagcatccatc
gctgttgatccgctgtctgggtttctatactggtctgactggggagagccagccaagatt
gagaaatctggtatgaacggagtggatagacaggttctggtggcgacggacatccagtgg
cctaatggaatcactctggatctgatcaaaggcagattgtactgggtcgactcgaagctg
cacatgctctgtagcgtcgacctgaacggagacaacagaaagaaagtgctccagtcttca
gagtacctggctcatcccttcgctctaactgtttttgaggatcgtgtcttctggacggat
ggcgaaaatgaagccatctacggcgctaacaagttcacaggctctgacgtggtgacgctg
gccagcaacctgaatgacccccaggacatcatagtgtaccacgagctgatccagctctcg
ggtgctaactggtgtgcagagaaaggtgaaaacggaggctgcagctacatgtgtctgcct
gcaccgcagatcaacaaacactcgcccaaatacacgtgcatgtgtccagacggacaggag
ctgtccgctgacggcttacgctgcagacctgaccgttctgcaaaagattcctcaaaggat
aatgggaaagctctaatacaaccacccccagaagccaacgtgagcacgtcgatccaggtg
aacgccactgccagaggctctgctgctgcctgggccatactgcctgtcttgctgctggcg
atggcggcggccggtggctacctgatgtggagaaactggcagctaaagaatcagaagagc
atgaactttgacaaccccgtctatctgaagaccacagaagaagacctcaacatcgacatc
acccggcacggcgccaacgtgggtcacacctaccctgcgatttccatagtgagcacagag
gatgatttatcgtga
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