Cottoperca gobio: 115016486
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Entry
115016486 CDS
T07513
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115016486 (taf1c)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
115016486 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
115016486
NCBI-ProteinID:
XP_029300112
Ensembl:
ENSCGOG00000022611
UniProt:
A0A6J2QS60
LinkDB
All DBs
Position
12:complement(2864700..2880255)
Genome browser
AA seq
1021 aa
AA seq
DB search
MDYQFPQQLFPSFYNCGPPDSVLKHCAGNWGCYDQVRPQGSSGPLSSWTFTSRHQVRGET
WRHTEPVPLPLLSPKNSFLWPLTPPDPLEFTQHMQNFFMDHCQDAFGCMSEILSENVNFN
EGPRKKYRSDMIHIGKMKTFLDRLKLKTGPQPYLSRSLNMYSALLSDVLPAIPPGLMGSL
LYEELTEQRDRMLFSEGATGGALAFVPFSQSSSDTQRGCLLYPRNQGLDCLNFHRVELQH
HRGSSSCVDASSSEPFSFQLKGPVRQISSASLLDDCCVAVRSDRLCGVWRFSERNKPHLL
QVVNTREVATCISVSPHVLGEVLVASESGAANLWTVGRGMQTVRKEDQNLYFNAKSSWRW
CEFSAHPRVMLYADRTGVELTDIRVSPVSNHTMFRISKTPECRTGERLILSRYLGDVHPF
QHLINTQYSAYIMDERFPCMPMLKWDHMMQSPPTFCHSFGGSASGSAGGGARTTKILLGS
HSSQEITLLQYSGGRAEACSSRGPPQALLRPRDSLRHLPVQIPHRLDLATSRLSSPAAGL
TCIQKRGGREAGGEECICILQLTEAGDIFYQFLEPEQPDTSPPPAAEDEPLPAAEDEPLP
AAEDEPLPAAEDEPLPAAEDEPLPAAEDEPLPAAEDEPLPAAEDEPLPAAEDEPLPAAED
EPLPPPALIKTAKQLLPHSQMIISDTSSDEDIIGPSQSQTVQRSVAETPEREQQSSDSSS
EDSESGGKAGIPKHLQLQVVVNDDPELEQVSGLEAGVEDGKEGKDNADGTEGPSGVEETA
SCPKLSDSALVTWKHWLQKLMQKSRKKNPRQHCRQHLTVKTTSLVHLSDDEARDWTEKER
VEALRRDLRACMSKRSLLVHRADSASLRAPDVIMVPDVVDTEAWSDQLSRRLSLSWQGEE
AWCAWWEDQLGMNKEKKLEALKTKRRREKEAKRASGQRLELSASFTSSISYQSEVSDFSD
LTGWSSAASQGAWSDTEGKLSQFEGLTGEWDTKSFNTLHHANRHSSSHVDHHTSKCERRT
R
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggattaccaattcccacagcagctttttccttctttttacaactgcggaccaccggat
tcggttctgaaacactgcgctggaaactggggctgctacgaccaagtccgacctcagggt
agttccggtcctctctccagctggacatttacatccagacatcaggtcagaggggagacg
tggcgtcacactgagccggtaccacttcccctcctgtctcctaaaaactctttcctttgg
cctttgacgcctccagatccactagaattcacacaacatatgcagaacttcttcatggac
cactgccaggacgccttcgggtgcatgagtgaaattctgagcgaaaacgtgaactttaat
gaaggaccgagaaagaagtatcgcagcgatatgatccacatcgggaagatgaaaacattc
ctcgacaggctgaagttaaaaaccggtccgcagccatatctgtccagatcgctgaacatg
tacagcgccctgctgtcggacgtgttgcccgccatccctcctgggttgatgggttctctg
ctgtatgaagagttgacggagcagagagaccgcatgctgttctctgaaggagccacagga
ggcgcgctggccttcgtccccttctcacagagcagcagcgacactcagcgtggctgcctc
ctctaccccagaaaccagggactagactgcctcaacttccacagggtggagctgcagcac
cacagaggaagttcctcctgtgtggacgccagcagcagtgagccgttcagcttccagctg
aaaggccccgttagacagatcagctccgcctccctgttagacgactgttgtgttgcagtg
cgctcggatcgcctatgtggagtttggcggttcagtgaaagaaacaaacctcatctgctg
caagtggtcaacaccagagaggtcgcgacctgcatcagcgtcagtcctcatgttttaggt
gaagttctggtggcgagtgagagtggagcagcaaacctgtggactgtcggcagagggatg
cagacggttcggaaggaggaccaaaacctgtacttcaacgccaagtcgtcatggcgatgg
tgcgagttctccgcccatccgagggtgatgctgtacgcagacaggacgggggtggagctc
acagacatcagggtgagtcctgtctcaaatcacactatgtttcgtatcagtaaaacccca
gagtgtcgcactggggagagactcattctgtccagatatctgggagacgtgcaccccttc
cagcacctcatcaacacgcagtactcggcctacatcatggacgagcgcttcccctgcatg
cccatgctcaagtgggatcacatgatgcagtccccacccacgttttgtcactcttttggc
ggctctgcctccggctcagcagggggcggggctcggaccaccaagatcctgctgggctca
cacagctctcaggaaatcacactgctgcagtattcaggaggcagagcagaggcctgttcc
agtcggggtcctcctcaggcgctactcagacccagagacagcctgagacaccttcctgtc
cagatccctcaccgcctggaccttgcaaccagcagactgtcctcacctgcagcaggtctg
acttgtatccagaagagaggaggaagagaggcaggtggcgaggagtgtatctgtatcctc
cagctgacagaggcgggagatattttctaccagttcctggagcctgagcagccggacacc
tctccacctcctgctgcagaggatgaaccgttgcctgctgcagaggatgaaccgttgcct
gctgcagaggatgaaccgttgcctgctgcagaggatgaaccgttgcctgctgcagaggat
gaaccgttgcctgctgcagaggatgaaccgttgcctgctgcagaggatgaaccgttgcct
gctgcagaggatgaaccgttgcctgctgcagaggatgaaccgttgcctgctgcagaggat
gaaccgttgcctccaccagcgctgataaaaacagccaaacagcttttaccacattctcag
atgattatatcagacacgtcgagcgatgaagacataatcggaccatctcagagtcagact
gtgcagaggtctgtggctgaaacaccagagagggaacaacaatcatctgactcttcctca
gaggattcagagtccggagggaaggctggaataccgaagcatttgcagcttcaggtcgtg
gtcaacgatgatcccgagctggaacaagtgagtggattggaggcaggtgtggaagatgga
aaggaggggaaagataatgctgatggtactgagggacccagcggtgtggaggaaactgcc
agctgcccaaagctcagcgacagcgctcttgtcacgtggaaacattggctccagaaattg
atgcaaaagagtcgtaaaaagaatccccgtcaacactgccggcagcacttaacagtcaaa
actacaagcctcgtccacctatctgacgatgaagcgagagattggacagagaaggagcgt
gtagaggccctgaggcgtgatcttcgagcgtgcatgtctaagcgctcgctgctggtccac
agggccgactctgcctccctcagagctccagatgtgataatggtgccagacgtggtcgat
acagaagcctggagtgatcagctcagccggcgcctgagcctctcctggcaaggggaggag
gcatggtgtgcttggtgggaggaccagctggggatgaacaaggagaagaagctggaggct
ctgaagacgaagaggaggagggagaaggaggcaaagagagcctccggccagcgcctagag
ctgtccgcgagcttcacgtcgtctatcagctaccagtccgaggtcagcgatttctctgat
ttgactggctggtcctctgcagcgagccagggggcgtggtccgacaccgagggtaagctg
tcccagttcgaagggctcactggagagtgggacaccaagagcttcaacaccctccaccat
gcaaaccgacactccagttcccacgtcgaccaccacacctcaaagtgtgaaagacgaaca
cggtga
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