KEGG   Cottoperca gobio: 115016516
Entry
115016516         CDS       T07513                                 
Name
(RefSeq) LOW QUALITY PROTEIN: roquin-2-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
cgob  Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cgob03000]
    115016516
   04121 Ubiquitin system [BR:cgob04121]
    115016516
Transcription factors [BR:cgob03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    115016516
Ubiquitin system [BR:cgob04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115016516
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 Prok-RING_4 zf_CCCH_4 zf-CCCH_UNK zf-C3HC4_2 zf-RING_4 zf-C3HC4_4
Other DBs
NCBI-GeneID: 115016516
NCBI-ProteinID: XP_029300161
UniProt: A0A6J2QR10
LinkDB
Position
12:complement(11602609..11625107)
AA seq 1149 aa
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQVPDVQPVSLSSAAEVENYEECKVCVEELALYLKPISGAKGVAT
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIIHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRPHLELLANI
DHNPDAPAPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDTPQPQANSKYKTSMCRDLR
QQGGCPRGTNCTFAHTQDELEKFRLRNKKSISVGRAFPLSPGVMGKTFTMEGSIHEDLSA
GVGQGLKGIGENTASLTEGVPGLTHPQLISRGADMMEEMKRAVPNGSSGANGSNGLSSRN
TSGSTEQKPISPPRTPVSHSSASSPLTAAGRGDGGAPLPKHGQFVLRAPHPSQASELYYQ
EPHSAYDTPHYQPTSGSYYQSTLHPPHKPCMARFLRSSNVPESSLPPSIGTPPSSYPSDP
QAPHPPPSSSSGYPPRDRMGPPAFHHHPGQPQYGPLAPAHGVYAPLYDSRRVWRPQLYHR
EDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGAEHRAGLHRDYGRVPLGYEDLFRR
KQEQWAHHHHHHSANRPSQSSPIFTIDFGTEHVESGGGQCMGCRFRGEESLAHYSPWSCG
TIGTCLSPFEPETLAHTSAHSCSEHSELDTNGGGGGGGSGGVGKRWLHSLDHYRRLKDED
PIIPFSEGPIISKWGAISRASRTGYHTSDPIQATACQGSASTTPINFKDYNHHLDHSDYR
WSSRGSDSSSHSSFLESEQICASELHCRRTSISSGEKIVSDLQARQSAYSRDRGRAESEP
DPDRDIELELCALHMEDSDLQEIKSQESLDLAAPQSQDASHFLPPPCSSPLLSSPVEEHP
QTEKSLTEKMDAHLLKKMAFRKSLSPGGLVTGSLGVGKLMLRTGPPRLGDTSARTCPETP
VTEMLLNGS
NT seq 3450 nt   +upstreamnt  +downstreamnt
atgccagtgcaggcggcccagtggacagagttcctgtcctgtcccatctgttacaatgag
tttgacagcagcggccaccagcccatcagcctgggctgctcccacacggtgtgtaagacc
tgcctgcacaaactgcaccgcaaggcctgccccttcgatcagacaccaatcagcaccgat
atcgacctgctgccggtcaactgtgccctgctgcagctggttggcgctcaggtcccagat
gtgcagccggtgagcctgagcagtgcagcagaagtcgaaaattatgaggagtgcaaggtg
tgcgtggaagagctggctctctacctaaaacccatcagtggagcaaaaggtgtggcgact
ctgagtcccagcgtgctcagccggccaatgcagaggaagcttgtgactttggtgaactgc
cagctggtggaggaggagggccgtgtgcgggctgtgcgggcaggccggtcgctgggggaa
cgaactgtaaccgagctcatcctgcagcaccagaacccccagcagctctctgccaacctc
tgggcagcggtgagggcgcggggctgtcagttcctaggacctgctatgcaagaagatgct
ctgaagctagttttactggctctggaggacggctcggctttgtccaggaaggtgttggtt
ttgttcgtagtccaaaagctcgaagctcgcttcccccaagcctccaaaaccagcataggg
cacgtggtacagcttctctacagggcctcctgcttcaaggtgactaagcgggatgaagac
tcctcactgatgcagctgaaagaagagtttcggacatacgaggctctcaggagagaacat
gacgctcagatcatccacatcgccatggaggcaggcctacgaatttctcccgagcagtgg
tcctctctgctgtacggagatctggtccacaagtcacatatgcagtccattattgacaag
ttgcagtctccagagtcgtttgcgaaaagcgttcaggagctgacgatcgttctgcaaagg
acaggagaccccgccaacctcacaagccttagaccgcacctagagctactcgccaacata
gaccacaacccagatgccccggcaccatcatgggaggagcttgaaagtgtgatgctggct
gtgaagttggtggttcatggacttgtcgaattcatacagaacttcagcaagaagagccac
gacactccgcagcctcaggccaacagcaagtacaaaaccagcatgtgccgagaccttcgt
cagcagggaggctgtccccgaggaaccaactgtacatttgcacacacacaggatgagttg
gaaaaatttagactgagaaacaagaagagcataagcgtgggccgtgcattcccgttatca
ccgggggttatgggtaaaaccttcacgatggaggggagcatccatgaagatttgtctgca
ggcgtggggcaggggctcaaaggcataggggagaacacagcctccctgacagagggagtg
cccggcttaactcacccccaactgatctctagaggggctgacatgatggaggaaatgaag
agagcggtgccaaatggatccagtggggctaacgggtccaacgggctgtctagcagaaac
acatcagggtcaactgaacagaagcccatctcacctcccaggactccagtcagccactcc
tcagcgtcgtctcccttgacggcagctgggcggggtgatggtggcgctcctttgcccaaa
catggtcagttcgttctgcgtgcaccacatccttctcaggcgtcagagctgtactatcag
gagccccactctgcatatgacacaccccattatcaaccaacctcaggttcctactaccaa
tctactcttcatcctcctcacaaaccctgcatggctcgcttccttcgatcctctaacgtc
ccagagtcctctctgccgccctcgattggcactccgccatcttcctaccccagtgaccct
caagcgccacacccacctccctcctcttcttcggggtacccgcctagagatcggatgggg
cctcctgccttccatcaccacccggggcagcctcagtacgggcctctggctcctgctcac
ggtgtttatgctcccctctatgacagcaggagagtatggaggcctcagctgtaccacaga
gaggatgccaggagtaactcgctgcctccggaggtgctgcattcctccgtctaccagcct
ccactcagggagagattcaactctctagatagcaactactgctccggagctgaacaccgt
gcagggcttcacagggattatggccgtgttcctctcggctacgaggatctgttcagaagg
aagcaggaacagtgggctcatcatcaccaccatcacagcgccaacagaccctcccagtca
tcccccatcttcaccatcgattttggaactgagcatgtggagagcggtggaggccagtgc
atgggatgcaggttcagaggtgaagaaagtttagcacactattctccatggtcctgtggt
accatcggcacatgcctcagtccctttgagcctgaaacgctcgcacacacctcggctcac
tcctgctctgagcactcggagttggacactaacggaggtggtggtggtggtggtagtggt
ggtgtcgggaagcgatggctgcattcgttggatcactaccgacgcttgaaagacgaggac
ccgatcattccctttagtgaggggcccattatctccaagtggggcgccatatccagggca
tctcgtacggggtaccacaccagcgaccctatccaagccacggcctgccagggaagcgcc
agcaccacacccatcaactttaaagattacaaccaccacttggatcacagcgactacagg
tggagctccagaggatcagactcttccagccactccagtttcctagagagtgagcagatt
tgtgcctcagagcttcactgccgtcgaacttcaataagcagtggagagaaaatcgtgtcc
gacctgcaagcccgtcagtccgcctacagccgggatcggggccgggccgaaagcgaaccg
gacccggatcgagacattgagctcgaactgtgcgctcttcacatggaggattcagacctc
caggagatcaagtctcaggagtctttagacctggctgccccacagtctcaggatgcttct
cacttcctcccaccaccctgctcctctcccctcctctcctcccctgtggaggagcacccc
caaacagagaagtctttgacagaaaagatggacgctcacctgctgaaaaagatggccttc
aggaagtctctgtctcctggagggctggtcacaggaagtctgggcgttggcaagctcatg
ctgcggactggacctcctcgactgggggacacatccgcccggacttgtcctgaaacgcct
gtgacggagatgctgctcaatggaagctaa

DBGET integrated database retrieval system