Cottoperca gobio: 115016608
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Entry
115016608 CDS
T07513
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115016608 (chd1)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115016608 (chd1)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
115016608 (chd1)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
115016608 (chd1)
SLIK complex
115016608 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
115016608
NCBI-ProteinID:
XP_029300335
Ensembl:
ENSCGOG00000017390
UniProt:
A0A6J2QST5
LinkDB
All DBs
Position
12:complement(2372252..2393843)
Genome browser
AA seq
1806 aa
AA seq
DB search
MAGRSEEESVSNSSGESSNSDDESGSGSGSASGSASGSSSSSSSSSSQSGSSDSGSGSDS
GSPSDSDTEKSKEKMEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQQQQQQQQQQQQQ
QQQQQQQQRQSSSNSGSDEDSSSSDGSDSSSGSKRRRNSGSSDSGSGSGSGSGSGSDSSA
EEKSDETASDYEPSHKIKSRKPPTKMNFRNGKKSSNQKKKSSQKCSSSEDEDENYKKVAS
AGPRRQATVNISYKEDDELKTDSDDLVEVVGEDVPQPEEEEFETLERVMDCRIGRKRATG
STTTVYAIEADGDPNINFNSNKEAGDIQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKM
DNFKKKDTEKKRWIKAASPEDIEYFNCQEEMMDDLHSQYQLVERIIGHSNQKSAAGYPDY
LCKWQGLSYSECSWEDGALIGKKFQKCIDDYMSRNQSKCIPSRDCKVLKQRPRFMPMKKQ
PSYIGGDGLELRDYQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNCLLNDHQLY
GPFLLVVPLSTLTSWQREIQLWAPQMNFVVYLGDISSRNMIRTHEWMHVHSKRLKFNILL
TTYEILLKDKSFLGNVNWAFIGVDEAHRLKNDDSLLYKTMMDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFHSWEIFEEAHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKV
EQILRVEMSAIQKQYYKWILTRNYKALSKGTKGSTSGFLNVMMELKKCCNHCYLIKPPED
NEFLNRAEALQQLIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLKSRQFL
FQRLDGSIKGEMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKRQVNIYRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHT
GAAPSSSAPFNKEELSSILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPTPST
VGEELLSQFKVANFSMMDDEDIDIDSERSHRSWDDIIPGEQRRRMEEEERQKEMEEIYLL
PRMRNCAKQQSSFNASQGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDA
EIRRFVKSYKKFGGPLERLDAIARDAELVDKAEHDLKRLAETVHNGCVRTLRENPCGPEK
TSGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHKAIPSDPEERKKYMIPCHSKAAH
FDIEWGKEDDSSLLIGIYEYGYGSWEMIKMDPDLSLTHKLLPDDPDKKPQAKQLQTRADY
LIKLLSKDLAKKEAQKQAGTANSRKRKPRSKKSKTLKPIKTEEVLKSTSSDPPSDKRSDD
EDEIEEEKEVTPVKAPSRRGRTDRVKEEDEDEELEQEEVSSSGEREVKEKDNKKEGKKEK
KEESWDIKETKEPKEKKETKPLEAVHKQEESMEKNDIKTEVRERTKKASDVPVHITASGD
NVPVSEESEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHI
TECLKEYSNPDQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNTRSI
NAHSYKHADIERLKDNSHQDESSRDSYSSDRHQPSARHHESSSSKERHSSEPHRKSTGGE
SRKRPYSSFSNGKDHRDRDHYRPDSRDRDRQDRYYNDGKHRKLEEFRSSRDHRLDMKDHS
HSDHRSSYRYHSDWQTEQRASASGPRSPRDQRSPYDSRSPMGHRSPFDYSSDHKSTPEQI
WSSRKT
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaagaggaaagtgtaagcaacagcagtggagaatcaagtaattct
gatgatgaatccggttctggatcaggctcagcatcagggtccgcctcaggctccagttcc
agctcctccagcagcagcagccaatcagggagcagtgactcaggaagtggctcagactct
ggcagcccgtcagattctgacacagagaaatccaaggagaagatggaaccgccaaataag
tcaaacattgacggagctgagttctggaagtccaacccaagtatcctagcagtgcaaaga
tctgctatgctcaggaaacagcagcagcagcaacaacaacaacaacaacagcagcagcag
cagcagcagcagcagcagcagcagagacaaagctcctcaaacagtggatccgatgaggac
tcatcaagtagcgatggatctgactcatcgagtggatccaaaaggagaagaaattcaggc
tcctctgactctggatcgggttctggatctgggagtggttctggatcagactcatcagcg
gaggagaaaagtgatgaaacggcatcagactatgagcctagtcacaaaatcaaaagcaga
aagcctccaaccaagatgaattttcggaatgggaagaaaagtagtaaccagaagaagaaa
tcatcccagaagtgttcttcctctgaggacgaagatgaaaactacaaaaaggtggcgtct
gcggggccacggcggcaggccacagtcaatatcagctacaaggaggacgatgagctgaag
actgattccgacgacctggttgaagttgtaggtgaagatgtcccgcagcctgaggaagag
gagtttgagacacttgagagagtgatggactgcaggataggaaggaaaagagcaacagga
agtacaactactgtatacgctatagaagcagacggggaccccaatatcaacttcaattcc
aacaaagaggctggtgacatccagtatttgataaagtggaagaactgggcccatatccac
aacacttgggagacagaggagacactcaagttacagaacgtcaagggcatgaagaaaatg
gacaatttcaagaagaaggacacggagaaaaagagatggataaaggcggcttcaccagag
gatatagagtatttcaattgtcaggaagaaatgatggatgacctgcactctcagtaccag
cttgtagagcgaatcataggacattcaaaccagaagtctgcggctggttacccagactac
ctgtgcaagtggcagggtttatcatactcagaatgtagctgggaagatggcgctctgatc
ggcaaaaagttccagaaatgcatcgatgactacatgagcagaaatcagtccaagtgcatt
ccatccagagactgcaaggtgctcaaacagagacccaggtttatgcctatgaagaagcag
ccatcttacataggaggtgatggactcgagctccgagactaccagttggacagtttgaat
tggatggcccactcctggtgcaaagggaatagttgcatccttgctgatgagatgggttta
gggaagaccatccagacgatctccttcctcaactgcctgcttaatgatcaccaactgtat
ggacccttcttgttggttgtgcctctctctacactaacctcctggcagagggaaatccag
ctctgggcccctcagatgaattttgtcgtctatctgggagacatcagcagcaggaacatg
atcaggacacatgagtggatgcatgttcatagcaagagactgaagttcaacatccttctc
acaacatatgagattcttctcaaagacaagtcatttttgggcaatgttaactgggccttc
attggcgtggatgaggcgcaccgactgaagaatgatgactccctcctgtacaagacgatg
atggacttcaagtccaatcacaggcttctgatcacaggaacgccactgcagaactctctg
aaagaactatggtccctgctgcacttcattatgccagagaagtttcactcctgggagatc
tttgaggaggcacatggtaaaggcagggactcaggctacaccagtctgcacaaagagctg
gaaccttttttactgcgccgagtcaagaaggatgtggagaaatctcttcctgccaaagtg
gagcagatcctcagagtggagatgagtgctatccagaaacagtattacaaatggatcctg
accaggaactacaaggctctgagtaaaggtaccaaaggcagcacgtcgggcttcctgaac
gtcatgatggagctgaaaaagtgttgtaaccactgttaccttatcaagccccccgaggac
aacgagttcctcaacagagctgaagccttacagcaactgatccgcagcagtgggaagctg
gttctgttggacaaactgctggtgcgtttgaaggagcgaggccacagagttctcatcttc
tcccagatggtacggatgctggatatcttggctgaatacctgaagagccgacagttcctc
tttcagagattagatggctccatcaaaggcgagatgaggaagcaggcgttggatcacttt
aatgctgagggctcagaggatttctgcttcttgttatcaacgcgtgcgggtggtctgggt
atcaatctggcatcagctgacacggtagtcatctttgactcggactggaacccccagaat
gatctgcaggcccaggccagagcgcacaggatcgggcagaaaagacaggtgaatatctac
cgtctggtgacaaaaggctcagtggaggaggaaatcattgagagggcgaagaagaaaatg
gtgctggaccaccttgtcattcagaggatggacactacagggaaaactgtcctccatact
ggtgctgctccctccagttcagcaccattcaacaaggaggagctgtcttccatcctgaag
tttggtgctgaggagcttttcaaagagccagagggtgaggagcaggagcctcaggaaatg
gacattgacgagatcctgaaaagagctgagacccgggagaatgaccctacaccctccaca
gtaggagaagaactgctgtctcagttcaaggtagccaacttctccatgatggatgacgag
gatatagacatcgactctgagcgtagtcatcggagttgggacgacatcattcctggggag
cagagaaggaggatggaggaggaggagagacagaaggagatggaggaaatctacctgctg
ccccgcatgaggaattgtgccaaacagcagtccagctttaacgccagtcagggtcggcag
agcaggaaccgaaggtattctgggtccgacagcgactccccctcagaccgaaaaaggcca
aagaaaagaggacggcctcggaccattccacgagaaaatatcaagggcttcagcgatgct
gagatccggaggtttgtcaagagttacaaaaaatttggaggaccactggaaaggttggat
gctattgctcgtgatgctgaacttgtagataaggctgaacatgacctgaaacgcttggca
gagacggttcacaacggctgtgtgagaacactacgagaaaacccctgtggaccagagaag
acttcaggaggcagaagagggaaggtgaagggccctacattcaggatctctggagtccag
gtgaatgccaagcttgtcatctctcatgaggaggagctggctccgctccataaggccatt
ccttctgatcctgaggagagaaagaagtatatgattccatgccattcgaaggcagcacac
tttgacattgaatgggggaaagaagacgactccagtctcctcataggaatctatgagtac
ggttacggcagctgggagatgatcaagatggatccggacctcagtcttactcacaagctc
ctaccagacgacccggacaagaagccacaggccaaacagcttcagaccagagccgactac
ctcatcaagttgctaagcaaagacctggccaagaaagaagcacagaaacaagcagggaca
gccaattcacggaagaggaaaccaagaagtaaaaaaagcaaaactctgaagccaattaag
acagaagaggtgctgaagagcacgtcctcagatcccccatcggacaagaggtcagatgat
gaggatgaaattgaggaggaaaaggaagtgacaccagtgaaggcaccgagcagacggggc
cggacagacagggtgaaggaggaggatgaggacgaggagcttgagcaggaggaagtttct
tcatcaggggagagggaggtcaaagaaaaagacaacaaaaaagaaggcaagaaagagaag
aaggaggaaagttgggacattaaagagacaaaggagccaaaagagaaaaaagaaaccaag
cctctggaggccgtacataaacaagaggagagcatggaaaagaatgacataaagactgag
gtacgagaacgaacaaagaaagcctccgatgtgccggtccatataacagcaagtggagac
aatgtgccagtatctgaggagtctgaggaactggaccagaggaccttcagtgtgtgtaaa
gagaggatgcggccggtgaaagcagccttgaaacagctggacagaccggagaaagggctg
tcggagcgtgaacagctggaacatacgagacagtgcctcataaagatcggagaccacatc
actgagtgtctgaaggagtattcaaatcctgaccagatcaaacagtggagaaaaaacctg
tggatatttgtttccaaattcactgagtttgatgccaggaaactacacaaactgtataag
catgcaatcaagaaaagacaagagaacgcccaggcaatggagcagaacactagaagcata
aacgcccacagctataaacatgcagatattgaaaggctgaaggacaactctcaccaggat
gaaagcagcagggacagttacagctcagacaggcatcagccttcagctcgacaccatgag
agcagcagcagtaaggagagacacagctcggagccccacaggaagtccacaggaggggag
tccaggaaaaggccgtactcctccttcagcaacggcaaagaccatagagacagagaccac
tacagaccagacagcagggacagagacagacaggacagatactacaacgacggtaagcac
aggaagctggaagagttccgctccagcagagaccatcggctggacatgaaggatcattcc
cactcagaccaccgctcctcctaccgctaccactcagactggcagacagagcagcgagca
tcagccagtgggccccgctctccccgagaccagcgctcaccctacgactcccgctcaccc
atgggacaccgctcacctttcgactactcatcagaccacaagagcacaccagagcagatc
tggagcagccgcaagacataa
DBGET
integrated database retrieval system
