Cottoperca gobio: 115016643
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Entry
115016643 CDS
T07513
Symbol
sbno1
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgob03036
]
115016643 (sbno1)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115016643 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
BUD22
Helicase_C
Motif
Other DBs
NCBI-GeneID:
115016643
NCBI-ProteinID:
XP_029300420
Ensembl:
ENSCGOG00000005666
UniProt:
A0A6J2QT25
LinkDB
All DBs
Position
12:17498657..17512303
Genome browser
AA seq
1400 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDFGLFDVDSQDVAQPSTTQQSISISALEGGGTESLEIVRN
EHPAPVPIVTIRHKPQPSTTTFVLNQLNQLPSLGAAVTKQSVTNPIKHTITVTKVVHVTN
SALRGSLTSSSTSIPPSVSTVVPSNRDQQIQLKDLLRTGNVRSTGLKGSSLMELMRLKPP
SNIAPPVATATATGEMNNGIKKEVLGKDAARIWINDDVKMQAFSHSLKIPGMKEEDEPEE
EEEDELGHAETYAEYMPMKLKIGQRHPDPVVETSSLSSVNPPDVWYRLSISEEVIDRGCL
SALQLEAITYAAQQHETFLPSGDRAAYLIGDGAGVGKGRTIAGVIHENYLLGRKRSLWFS
VSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQS
GGKYKTRFQQLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKAR
VVYASATGASEPRNMAYMNRLGIWGHKTPFREFANFIQAVERRGVGAMEIVAMDMKLRGM
YIARQLSFTGVTFKIEEVPLTPQYIKMYNKSVRLWVTAREKFQQAANLMDAEQRMKKSMW
GQFWSAHQRFFKYLCIASKVRRVVQLARQEVQNGKCVVIGLQSTGEARTLEALEEGGGEL
NDFVSTAKGVLQSLIEKHFPAPDRQKLYTLLGIDLSAKKTPSPSETAAQPEQKGKKRKGS
EIKNQSKKKPRKHGGLSGTSSEESQSEESERESDKDSDDSFKSVSSGDEDDDFNPFRDES
NDDEEDDPWLIRKEPKKEKKKKKRRRSIDPDCIQSALLASGLGSTRPAFTAPVIPPSTPA
IVKVESQDSCLTSQDAVENAQKMKKDLLEKLDDLAEDLPPNTLDELIDELGGPENVAEMT
GRKGRVVSNDDGTITYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGISLQAD
RRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAK
RLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVKLDSPLVSPASNFKGDF
FKEIQCGLIGVGLINIEDRFGAMSLDKDYNNMGKFLNRILGMEVQQQNALFQYFSDTLAA
VIQEAKKNGRYDMGILDLGSGDEKVKKIDCRKFLTPGYTTSGHVELYNVGVERGMSWEEA
THAWADQNGGDDGFYVQMRNNKKTAILVKEVNPKKRLFLVYRPNTGRQLKLETYTDIKKK
FKKVLSDDAKQHWTDQYLSSAKICSHAYWRGNCKKASVGLQCEVGLRCRTYYVLCGSVLS
VWNELEEVLTPVSGTNVKVQIVRLRTEDGQRIVGLIIPVNCVSALINKLSTSDQSQQLAV
QELQKRQQLHPQSLSHAPNT
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaggatttactgctggctgccctgagtgagagtggtatttgtccaaat
gattttggcctatttgatgttgattctcaggatgttgcacagccctctacaacccagcaa
tctatctccatcagtgccctggagggcggtgggacagagtcattggaaattgttcgaaat
gagcatccagctccagtccctatagttactatcaggcacaaacctcagccatcaaccacc
acgtttgtcttaaatcagctgaatcagttgccgtcactaggagctgctgtgaccaaacaa
tcagttacaaaccccatcaaacataccataactgtcaccaaagtggtccatgttactaat
tcagccctgcgaggatctttgacttcctcctccacaagtattcctccttcagtgtccaca
gtagtgccttctaacagagatcagcagattcagttgaaagacctccttcggactggcaat
gtgaggagcactggtctaaagggcagcagtctgatggagctcatgaggctaaagcctcca
tctaacattgctccaccagtagcaacggcaacagccacaggtgaaatgaacaatgggatc
aagaaggaagtgttgggtaaagatgctgccaggatctggattaatgacgacgttaaaatg
caagccttttcacattctctgaaaatcccagggatgaaggaggaggatgagcctgaagag
gaagaggaggacgagttgggtcatgctgagacatatgcagagtacatgccaatgaaatta
aagattggccagcggcatccagatcctgtggtggagaccagctccctgtccagtgttaac
cctccagatgtgtggtacagactatccatctcagaagaagtcattgatcgtggctgcctg
tctgcactgcagcttgaggcaataacatatgcagctcagcaacatgagacattcctcccc
agtggtgatcgagctgcctatttgattggagatggagcgggtgtggggaaaggccggacc
attgcaggcgtcatccatgagaattaccttttaggcaggaagagatcactttggtttagt
gtctcaaacgacttgaagtatgatgctgaaagggatttaagggacataggagccaaaaac
atccaggttcactcactgaacaagttcaaatatgggaaaatctcctcgaaacacaatggc
agtgtgaagaaaggtgtgatattcgccacctattcctccttgataggagagagccaatca
ggagggaagtacaagaccagatttcaacagcttctccactggtgtggggaggattttgac
ggagttatcgtgtatgacgagtgtcacaaagccaaaaatgtctgtccaatcggatcatcc
aaacctacaaaaactggtcttgccgtgttggaactgcagaacaaactccctaaggctcgg
gttgtgtatgcaagtgctacaggtgcctctgaaccgcgaaatatggcctatatgaatcgt
ctgggcatctgggggcataaaacacctttccgagaatttgccaactttatccaagctgtt
gagcgcagaggtgttggtgccatggagatagtagccatggacatgaaactgagggggatg
tacattgcaaggcagttgagttttacaggtgtgacttttaagattgaggaagttcccctg
actccgcaatacatcaaaatgtacaacaaatctgtgaggctgtgggtgactgcacgtgag
aagttccaacaggcagcgaacctgatggatgcagagcagcgcatgaagaagtccatgtgg
ggccagttctggtctgcgcaccagaggttcttcaaatacctctgcattgcctccaaagtc
cgcagagtggtccagctggcccgacaggaggtccaaaatggaaagtgtgtggtgatcggt
cttcagtccactggagaagcaagaacacttgaggccttggaggaaggaggcggagagctc
aatgactttgtgtcaactgcaaaaggtgtgctgcagtccctgattgagaagcactttcca
gctccagacagacagaagctttacaccctgctaggtatcgacctctcagctaagaagact
ccctctcccagtgagactgcagcacaaccagaacagaagggcaagaaaaggaaaggttct
gagatcaaaaatcagtcgaaaaagaagcctcgcaagcatggtggtttgtcgggtaccagc
tccgaggagagccagtcggaggagtcagaaagagagtctgataaagacagtgacgacagc
ttcaaatctgtcagctcgggggacgaagatgatgatttcaacccattcagagacgagtct
aatgacgatgaagaagatgatccttggctcatcaggaaagaaccaaagaaggagaagaag
aagaaaaagagaaggaggagtattgatccagattgcattcaaagtgccttgttagcctct
gggctggggtccaccaggcctgctttcactgcccctgttatcccccccagcacacctgcc
atagtcaaggtagagagtcaggatagctgcctaacaagtcaggacgcagtggaaaatgcc
cagaaaatgaagaaagatctgctggaaaaacttgatgatctagcagaggatctacctccc
aacactctggacgagctgatagatgagctgggaggacccgagaacgtagctgagatgact
ggccgcaaaggtcgcgtagtcagcaatgacgatggcaccatcacctatgaatctcgctct
gagctggatgtccctgtggaaatactcaatctcaccgagaagcaaaggttcatggatgga
gagaagaacatagccatcatctcggaagctgccagctccggtatatccctgcaggccgat
cgtcgagtgaagaaccagcggcggagagtccacatgacactggagctaccgtggagcgca
gacagagcgatacagcagttcgggagaactcacaggtcaaaccaggtcacagctccagaa
tatgtcttccttatatcggagcttgcaggagagcagagatttgcgtccatcgttgccaaa
agactagagagcctgggcgctctcactcacggagacagaagagcaacagaaactcgagat
ctcagcaggtttaattttgacaacaaatatggcagaaatgctctggaaattgtgatgaag
tcgatcgtaaagctagactctccattagtgtctccagcctctaactttaaaggagatttc
ttcaaagaaattcaatgtggattaataggtgtgggcctcataaatattgaggacagattt
ggcgcaatgtcattggacaaagactacaacaacatggggaagttcctgaaccgtattttg
ggtatggaggtccagcagcaaaatgccttgttccagtacttttctgacacattggcagca
gttattcaggaagccaagaagaatggcagatatgacatgggcattctcgatctgggctct
ggggatgagaaggtgaagaagatagactgcaggaaattcctaacaccgggctacaccaca
tcaggacatgtggagctctacaacgtgggtgtggagagggggatgtcgtgggaggaagcc
actcatgcttgggcagatcagaatggaggtgatgatggcttctatgtccagatgaggaac
aacaagaaaacagccatactggtcaaagaggtgaaccccaagaagaggctcttcctggtt
tacaggccgaacaccggcagacaactcaaactggagacgtacacagacatcaagaagaag
tttaaaaaggttttgtcagatgacgccaagcagcactggactgaccagtacctgtcgtca
gcaaagatctgctctcatgcatattggcggggtaactgtaagaaagcttcagtgggtctt
cagtgtgaagttggtcttcgatgtcggacgtactacgttctgtgtggctcggtgctcagt
gtgtggaatgaactggaggaagtgcttaccccggtcagtggaaccaatgtgaaggtgcag
attgtccgcctcagaacagaagatggacagaggatagttggactcatcattccagtgaac
tgtgtttctgcattaattaacaagctgtcaacgtcggaccagagccagcagctcgctgtg
caagagctgcagaaacggcagcagctccatccccaaagtctcagtcatgcacccaacaca
tag
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integrated database retrieval system
