Cottoperca gobio: 115016688
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Entry
115016688 CDS
T07513
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
cgob
Cottoperca gobio
Pathway
cgob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115016688 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115016688 (exosc2)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115016688 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
115016688 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
115016688
NCBI-ProteinID:
XP_029300510
Ensembl:
ENSCGOG00000007190
UniProt:
A0A6J2QTD0
LinkDB
All DBs
Position
12:complement(14813335..14819552)
Genome browser
AA seq
293 aa
AA seq
DB search
MAADMRLPTIQKPLSLSVSDFDRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFTDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPEQQDEEAGGFYTSLEPVGLSDREVISRLRNC
LLALAAHKVLLFDTSVLYCYESSVHHQVKDILKPEVMEEIVMLTQQKLLDQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacatgagattaccaacaattcaaaaaccactgtcgctatcagtttctgat
ttcgaccgaaaagatttggtcgtccccggtgatgttattacttcagacaccggcttcatg
aggggtcatggtacctacgttgatgaagacaagctgacggcttcagttgctggagaggtg
cagagagtggacaagctgatctgtgtcagacctcttaagaccaggttcaatggtgaggtt
ggagatgtggtggttggcagaatcacagaggtacaacagaaacggtggaaggtggagacc
aactcccggctggactctgtcctcttgctgtcttctgtcaatctgcctggaggagagctg
aggagacgatcagccgaagatgagctcaccatgagagaataccttcaggagggcgatctc
atcagtgcagaggtgcagtctgtcttcacagatggagccctatcacttcacacccgtagt
ttaaagtatggaaaattgggtcaaggagtgcttgtccagctttctccttctctgatcaag
aggcagaaaacgcatttccacaacctgccatgtggtgcatccatcatccttgggaataac
ggctttgtgtggttgtatcccacaccggaacaacaggacgaggaggctgggggcttctat
accagcctggagcctgttggtctgtcagatcgagaggtgatttcacggttgagaaactgc
ctcctggctttggctgcacacaaggtccttctgtttgacaccagtgttctctattgctat
gaatcttcagttcatcaccaggttaaggacatcttgaaaccagaagtgatggaggagatt
gtaatgttgacgcaacagaagctgttggatcaggaaggttaa
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