KEGG   Cottoperca gobio: 115016688
Entry
115016688         CDS       T07513                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
cgob  Cottoperca gobio
Pathway
cgob03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115016688 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgob03019]
    115016688 (exosc2)
Messenger RNA biogenesis [BR:cgob03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     115016688 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     115016688 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 115016688
NCBI-ProteinID: XP_029300510
Ensembl: ENSCGOG00000007190
UniProt: A0A6J2QTD0
LinkDB
Position
12:complement(14813335..14819552)
AA seq 293 aa
MAADMRLPTIQKPLSLSVSDFDRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFTDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPEQQDEEAGGFYTSLEPVGLSDREVISRLRNC
LLALAAHKVLLFDTSVLYCYESSVHHQVKDILKPEVMEEIVMLTQQKLLDQEG
NT seq 882 nt   +upstreamnt  +downstreamnt
atggctgctgacatgagattaccaacaattcaaaaaccactgtcgctatcagtttctgat
ttcgaccgaaaagatttggtcgtccccggtgatgttattacttcagacaccggcttcatg
aggggtcatggtacctacgttgatgaagacaagctgacggcttcagttgctggagaggtg
cagagagtggacaagctgatctgtgtcagacctcttaagaccaggttcaatggtgaggtt
ggagatgtggtggttggcagaatcacagaggtacaacagaaacggtggaaggtggagacc
aactcccggctggactctgtcctcttgctgtcttctgtcaatctgcctggaggagagctg
aggagacgatcagccgaagatgagctcaccatgagagaataccttcaggagggcgatctc
atcagtgcagaggtgcagtctgtcttcacagatggagccctatcacttcacacccgtagt
ttaaagtatggaaaattgggtcaaggagtgcttgtccagctttctccttctctgatcaag
aggcagaaaacgcatttccacaacctgccatgtggtgcatccatcatccttgggaataac
ggctttgtgtggttgtatcccacaccggaacaacaggacgaggaggctgggggcttctat
accagcctggagcctgttggtctgtcagatcgagaggtgatttcacggttgagaaactgc
ctcctggctttggctgcacacaaggtccttctgtttgacaccagtgttctctattgctat
gaatcttcagttcatcaccaggttaaggacatcttgaaaccagaagtgatggaggagatt
gtaatgttgacgcaacagaagctgttggatcaggaaggttaa

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