Cottoperca gobio: 115016774
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Entry
115016774 CDS
T07513
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgob03016
]
115016774 (pus1)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
115016774 (pus1)
Transfer RNA biogenesis [BR:
cgob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115016774 (pus1)
Prokaryotic type
115016774 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PLAC9
DUF2344
Motif
Other DBs
NCBI-GeneID:
115016774
NCBI-ProteinID:
XP_029300654
Ensembl:
ENSCGOG00000016545
UniProt:
A0A6J2QRV6
LinkDB
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Position
12:complement(10705587..10708271)
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AA seq
423 aa
AA seq
DB search
MFKIQPLLSALINHRLTLERNGGLCKLFCIMSEESRDEQTAKLLKRANEENEDSVEKVQA
TKKLKAEGENTEDEKKYPKKKVVLLVAYSGKGYYGMQRNPGTSQFRTIEDELVTSLIKSG
CIPENHGDDMKKMSFQRCARTDKGVSAAGQVVSLKLRLIEDIVEKINEHLPTQVKVLGLK
RVTQGFNSKNNCDARTYAYMLPTVAFSPKDYDTGKIAAFRLEPEALQRVNRLFALYKGTH
NFHNFTSQKASSDPSARRYITEMSCGEPFINSNTQFAVITVRGQSFMLHQIRKMIGLVIA
VTKGYVNEEVVERSWGPDKVDIPKAPGLGLVLERVHFDRYNKRFGGDGLHERLDWDHEEE
AIKAFKEAHIYPTIVETECKEGSMISWMSSLPIHDFKASATATGTQDNKDQKQDIADVGN
ASD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaatccaaccgctgttgagtgccttaattaaccacagactgacgttagagaga
aacggtggcctttgtaagttattttgcataatgagtgaagaatccagagatgagcagact
gccaagctgctgaaaagagccaatgaagaaaacgaagactctgttgagaaggtgcaggct
acaaaaaaattaaaagcagagggggaaaacactgaagatgagaaaaaatatcccaaaaag
aaagtggtcctccttgtggcatactctgggaagggatactatggcatgcagagaaatcct
ggaacctctcagtttaggaccattgaagatgagctggtcacttcacttattaaatcaggt
tgcattcctgaaaaccatggcgatgacatgaagaagatgtctttccaaagatgtgccaga
acagataagggtgtgtctgcagctggccaagtggtgtctctaaagctgcggttgattgaa
gacatcgttgaaaaaatcaatgagcatctaccaacacaagtcaaagtgctcggtctcaaa
cgggtgacccagggtttcaattccaaaaacaactgtgatgctcgtacatacgcctatatg
cttccaactgtggccttttccccaaaagactacgatactggcaagatagccgccttccgg
cttgagccagaggcacttcagagggtcaaccgtctgtttgctctctacaaaggcacccat
aacttccacaacttcacctctcagaaggcttcaagtgaccccagtgctcgccgctacatc
acagagatgtcttgtggagagccttttatcaacagcaatactcagtttgcagtgatcact
gtacgaggccagagctttatgctgcaccaaatccggaaaatgatcggcctggtgattgcg
gtgacaaagggctacgtgaatgaggaagtggtggagcggagctggggaccggataaggtg
gatatacccaaagctccaggactggggttggtcctggaaagggttcactttgaccggtac
aacaaacgattcggaggtgacgggctgcatgagcggctggactgggaccacgaggaggag
gcgatcaaggccttcaaggaggcgcacatctaccccaccattgttgagacggagtgtaaa
gagggctccatgatcagctggatgtcctcacttcctatccatgactttaaagcttcagcc
acagctactggcacacaagacaacaaggaccagaaacaggacattgcagatgtaggaaat
gcctcggattag
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