Cottoperca gobio: 115016864
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Entry
115016864 CDS
T07513
Symbol
itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
cgob
Cottoperca gobio
Pathway
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04810
Regulation of actin cytoskeleton
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115016864 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115016864 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115016864 (itga1)
04810 Regulation of actin cytoskeleton
115016864 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115016864 (itga1)
04515 Cell adhesion molecules [BR:
cgob04515
]
115016864 (itga1)
04090 CD molecules [BR:
cgob04090
]
115016864 (itga1)
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115016864 (itga1)
Cell adhesion molecules [BR:
cgob04515
]
Integrins
Integrin alpha subunits
115016864 (itga1)
CD molecules [BR:
cgob04090
]
Proteins
115016864 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP_3
VWA_2
DUF11
Motif
Other DBs
NCBI-GeneID:
115016864
NCBI-ProteinID:
XP_029300794
Ensembl:
ENSCGOG00000009730
UniProt:
A0A6J2QS81
LinkDB
All DBs
Position
12:21993476..22051585
Genome browser
AA seq
1185 aa
AA seq
DB search
MLGTSHFSVTAAAVVVLLPCVFSFNVDQKNGLSFSGPLEDMFGYTVQQFENSEGKWVLIG
SPLSGQPSKRTGDVYKCPVGRGDNTCVKLELPKNTTVPNLHEVKENMTMGSTLVTNPNGG
FLACGPQYGYMCGQQQYISGVCANVSDSFQILNSVAPAVQECAKELDIVIVLDGSNSIYP
WPSIIDFLKRFIENIVIGPKLSQVGIVSYGETVTHRVNLSQFDNTHDLLEFVEELPQQTG
LNTLTFLGIDTARKEAFMPERGARPGVKKVMVIVTDGESHDFHRMDKVIGDCEDEDIERF
GIAVLGDYNRQNKSAQQMQNFIKEIESISSQPLHDHFFNVSDEVALLTIVDALGSKIFAL
EATTGNFTSSFEMEMSQAGFSAHSSKDGVLLGAVGAYDWNGTVVMHTAAGTIIPGKTQFY
DPETEAGYEGLAGYLGYDVQSASTPEGVLYITGAPRYNHTGRVVIYRLNEKNQIVVLQIL
KGEQIGSYFGSVLQTVDVDGDSYTDLLLVGAPMYMGTEKNEQGQVYVYKLNKDDQFEHKF
TLKPVNQSCCTAHSESCTNKNEPCGARFGTAIAAVSDLNLDGFNDVAIGAPLENDHRGAV
YIYHGEKTSLKEKFVQHIPAGGDGVKVKFFGQSIHGVMDLNGDGITDVTIGGLGGASLFW
SRDVAELRANMTFDPVKINLQQTQYQCEHGGRKSVCVTTEVCFVYSIKSDKQDVNAAAEI
RYSLTLDALRAKARASFIDSDDKSDRRITRSFNIMDRERKCAPVTFMMSARLDFRDPLMV
SLEFGLTDEDEGPVLDENLPRSINKTIPLVDCGSDEKCIADLSLKAEPSVKKMMIRTNKD
KIDVNINVRNSKDNAYNTKVLLSFTPNVNYVKVEPEKACTLNHTKLECAVGYPFLGSNVE
ENLKVRFEVNPKHIQEVIQINVTATSDSEELDSTLHDNTVQISIPVKYEAGLIFSVRPVD
EHIVVKEGEQFSTSFNETRMLGEEVNISYTVEKSGEMVNPPLDLTVMYPHLSPRKNNLLY
LTRVTTSPQVECDAAHWINPQQINPEVVLPNPKKETLSVFLLSCENLYCASFSCSIPEAT
ISQVNVTFRVWKPTFIKGEFSSLHMLVNATLSIKNTDLFELSSSDSTRSVKIQVSKEILG
GISIWIIIISILIGLLILALVIFALWKMGFFKRKSRDYSKEEMMD
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggacaagtcacttctctgtgacagcagcagcagttgttgtgctgctgccgtgt
gtcttctccttcaacgtggaccagaagaacggtttgtccttcagcggcccgctggaggac
atgtttggctacaccgtccagcagtttgagaacagcgaggggaaatgggttctgattgga
tcgccgctgtcgggccagccgtccaaacggaccggagacgtctacaagtgtcccgtgggg
aggggggacaacacgtgcgtcaaactggagctgcctaaaaacacaacagttcccaactta
catgaagtgaaggagaacatgaccatgggaagcacgctggtgaccaatcccaacggaggg
tttctggcgtgtggtcctcagtatggctacatgtgtgggcagcagcagtacatctcagga
gtttgtgcgaatgtcagcgattccttccagatcctcaactccgtggcaccggccgtgcaa
gagtgtgcgaaggagctggacatcgtgatagttctggatggatccaacagtatctacccc
tggcccagtatcatcgacttcctgaaacgtttcatcgagaacattgtgatcggacctaaa
ctctcacaggtggggatcgtgtcgtatggtgagaccgtgactcaccgtgtcaatctgagt
cagttcgacaacactcacgacctgctggagtttgtggaagaacttcctcagcaaaccggt
ttgaacaccttgacgttcctgggcatcgacacagccaggaaggaggccttcatgccggag
cgtggtgcacgacccggggtgaagaaggtcatggtgatcgtgactgacggagagtcgcat
gacttccacaggatggacaaggtcatcggagactgtgaagatgaggacatcgagaggttt
ggcatcgctgtgttgggagactacaatcgtcagaacaagagtgcacaacaaatgcagaac
ttcatcaaggagattgaatccatctccagtcagccgctacacgaccacttcttcaacgtg
tccgatgaggtggcgctgttgaccattgtggacgctttgggaagcaagatcttcgccttg
gaagcgacaaccggcaatttcacctcctcctttgagatggagatgtcccaggctggcttc
agtgcgcactcttctaaagacggagtgttactgggagccgtgggagcgtatgactggaac
gggaccgtggtgatgcacacggctgcaggaaccatcattccagggaagacccagttctac
gacccagagacggaggccgggtacgaaggactcgccgggtacctcggttatgatgttcag
tcagcatccacccctgaaggagttctgtacatcacgggtgcaccgcggtacaaccacaca
ggccgggttgttatctatcgtctgaatgaaaagaaccaaattgtcgtcttacagatcctg
aaaggagaacagatcggttcctacttcggcagcgtcctgcagactgtcgacgtggacgga
gattcctacacagatctcctcttggtcggagctccaatgtacatgggcacggaaaaaaac
gagcagggacaagtttacgtctacaaactcaacaaggacgaccagtttgagcacaagttc
actttaaagcctgtcaatcagtcgtgctgtactgcccactcagaaagctgcactaataaa
aatgaaccatgtggtgcccggtttggaacggccatcgcagcggtatcagatctcaacctc
gacgggtttaatgacgtggctatcggtgcacctcttgagaacgaccaccgaggggccgtg
tatatctatcatggagagaagacgtcactgaaagagaagtttgtacagcacatccctgca
ggtggagatggtgtaaaggtgaaattcttcggtcagtccatacatggagtcatggatctg
aatggagatggaatcactgatgttaccataggaggtctgggcggggcgtcactgttctgg
tccagagatgttgcagagctccgtgccaacatgacctttgaccccgttaaaatcaacctg
cagcagactcagtatcagtgtgagcatggtggacgcaaatctgtgtgcgtgactactgag
gtgtgtttcgtgtacagtatcaaatctgacaagcaggacgtgaacgcggctgcagagatc
cgctacagtctgactctggacgctctgcgtgcgaaagcaagagcatcatttattgactct
gacgacaagagtgatcgtaggattaccaggagcttcaacatcatggaccgagagaggaaa
tgtgcgcctgtaaccttcatgatgtcggcccggctggacttccgagaccctctcatggtg
tctttggagtttggactcactgatgaagacgaaggccccgtcctggatgaaaaccttccc
agatccatcaataagacaattcccctggtggactgtgggagtgatgagaagtgcatcgct
gacctctcgctcaaagccgagcctagcgtcaaaaaaatgatgatccgaacaaacaaagac
aagatcgacgtgaacatcaacgttagaaacagcaaagacaacgcgtacaacacgaaagtt
ctcctcagcttcacccccaacgtcaactatgttaaagtagagccggagaaggcgtgcacg
ctgaatcacaccaagctggagtgtgctgttggataccccttcttgggaagcaacgtggag
gaaaacctcaaagtcagatttgaggtaaatcctaaacacatccaggaagtgattcaaatc
aacgtgacggccacaagtgacagtgaagagctggattcaaccctgcacgacaacacggtg
cagatctccatccctgtgaagtatgaagctggactcatattctcagtgcggcccgtggac
gaacacatcgtagtgaaagagggtgaacagttttccacttcattcaatgagaccaggatg
ctcggagaggaggtcaacatcagctacacggtggagaagtcgggcgagatggtgaatcct
ccgctggacctcacagtgatgtatccgcacctgtcgcctcggaagaacaacttactgtac
ctgacacgcgtcaccaccagcccacaggtggaatgtgacgcagctcattggatcaaccct
caacagattaacccggaggttgttcttccgaatccaaagaaagagactctgagcgtcttc
ctgctgagctgtgaaaacctgtactgtgcatcattcagctgctccatccccgaagcgacg
atcagtcaggtcaacgtcaccttccgagtgtggaaacctacgttcatcaagggcgagttc
tccagtctgcacatgttggtgaacgcaacgctgagcatcaaaaacaccgacctgtttgaa
ctgagcagcagtgacagcaccagaagtgtgaagatccaggtgtcgaaggagatcttggga
ggaatctccatttggatcatcatcatcagcatcctgataggactgctgatcttagcactt
gtcatcttcgctctctggaagatgggcttcttcaaaagaaaatccagagattactcaaag
gaggaaatgatggactga
DBGET
integrated database retrieval system