Cottoperca gobio: 115016891
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Entry
115016891 CDS
T07513
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
cgob03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115016891
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115016891
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgob01009
]
115016891
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115016891
03036 Chromosome and associated proteins [BR:
cgob03036
]
115016891
Protein phosphatases and associated proteins [BR:
cgob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115016891
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115016891
SWI/SNF complex
115016891
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115016891
PBAF complex
115016891
SWI/SNF complex
115016891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
115016891
NCBI-ProteinID:
XP_029300832
Ensembl:
ENSCGOG00000004619
UniProt:
A0A6J2QUD4
LinkDB
All DBs
Position
12:1417452..1429127
Genome browser
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPIDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggctctaagtaaaacgttcggccagaaaccagttaaatttcaattagaacaa
gatggggacttttacatggttgggtcagaggttggaaactatctgcgtatgttcagaggc
tctctgtataaaagatatccctctttatggaggaggctggcctcagtggaggagaggaag
aaaatcgtagcatcatctcatgccactagtgttactctgctgaaggcatcagaatgtgaa
gagatcttcgaggggaatgatgagaagtacaaggcggtgtccatcagcacagagccccca
gcttacctcagggagcagaaagcaaagagaagcagtcagtgggtccccactctgcccaac
agctctcaccatctagatgctgtgccttgctccaccaccatcaaccgcaaccgaatgggc
cgagacaaaaagaggaccttccccctgtgttttgatgaccacgaccctgcagtgatccat
gagaacgcagcccaggtggaggcgctggttcccattcgtctagacatggagatagacgga
cagaaactgcgagacgccttcacctggaacatgaatgagaaactgatgacaccggagatg
tttgcagagattctatgtgatgacctggacctgaatcctctggcctttgtccccgctatt
gcctcagccattcgccagcagattgagtcctaccccatagacagcatcctggaagagcag
gcagaccagagagtcatcattaagctgaacatccacgtggggaacatttctctggtggac
caatttgagtgggacatgtcggagagggagaactcgccagagtcgtttgcactgaagctg
tgctctgagctgggtctggggggagagttcgtcaccactatcgcctacagcattcgtggt
cagcttagctggcaccagaggacctatgccttcagtgagaacccactcccgacagtagag
attgccatccgcaacacaggtgatgcagaccagtggtgccccctgctggagaccctcaca
gatgccgaaatggagaagaagatccgagaccaagacaggaacacaaggcgtatgagacga
ctggccaacaccgctccttcctggtag
DBGET
integrated database retrieval system
