Cottoperca gobio: 115016930
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Entry
115016930 CDS
T07513
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
cgob
Cottoperca gobio
Pathway
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115016930
04518 Integrin signaling
115016930
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115016930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115016930
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115016930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
DUF7949
Fn3_VIN3
Pur_ac_phosph_N
Interfer-bind
EGF
NDNF
hEGF
DUF4998
NDNF_C
YlzJ
Motif
Other DBs
NCBI-GeneID:
115016930
NCBI-ProteinID:
XP_029300907
Ensembl:
ENSCGOG00000019994
UniProt:
A0A6J2QUM0
LinkDB
All DBs
Position
12:18564535..18602135
Genome browser
AA seq
1623 aa
AA seq
DB search
MGARGVLGCLLLTALLSLSNAGLVKKILRHRRQTLVSPKEHNLTLPNTDQPVVFNHVYNI
NVPASSLCSVDLDAPESTALHPKDAAVSSGNPMTEHTVNGENQIIFTHRINIPRQACGCS
DDLPGLKDLLSRLEMLEGEVSTLRDQCSSAQVTGELGTKPYCSGHGNYSTETCGCICEPG
WKGLNCSESECPNNCHGQGRCVGGKCKCFKGFAGKDCTLEVCTADCGAHGKCVGSVCICS
GGFFGEDCSQTKCLNNCLGRGRCEDGDCVCDEPWTGFDCSEVICPKDCYDRGRCMNGTCY
CDEGYVGEDCGDRTCPNNCHGNGFCVDGQCVCAAGFNGEDCSRVTCLNDCNDRGTCFNGM
CICDMGYQGADCSQLACLNNCNNRGQCINGQCACDVGFQEDDCAELSCPNDCQHRGRCVN
GQCVCEEGFAGEDCSIRTCPSNCYGRGECIKGRCVCHSDFTGEDCAELSCPNNCRNRGRC
IDGQCICDEGFSGEDCSQKACPNDCLGLGDCVDGKCICQEGYSGDDCSVHACPGNCNNRG
RCINGRCTCESGYEGESCAQLSCLNNCQDKGRCVNGRCVCDEGYIGEDCSEVSPPKDLNV
GDTTSDTVDLNWDNEMLVTEYIVTYVPTSPGGLQQQFTVAGDKTAATIKELEPGIEYLIS
VYAVLSNKKSVPVSARVATELPKPEGLIFKSVRESSVEVMWDQVDFSFDGWEIYFRKTKE
ENGKIVSTLPPTQNQFLQSNLAPGQEYEVSVAIIKNNTKGPQTSKRVTTKIDGPREVEVK
DVTDSSALVSWSQPAAPIDSVTMVYGPSSNPSDESIVEISPPDKQYSIDGLRPDTEYKVL
LISRSGDLTSDPTNTTFTTDLDAPMELQAVSQTDDSITLEWTNSQADVGIYLVKYTTISG
ATHGEENIPRGPGATTKATISGLKPGTEYGIGVTAVKKDRESVPATTNAATDIDPPRVFE
ETGSTETSLALRWQKPQAKVGAYRLVYVSRDGQVEEVEIPAKATSHVLFNLTPGMSYTLT
LAAERGHKRSAPVTLSASTEAEPEVEHLFVSDITADGFRLSWTANEDLFDRYVIKIRDGK
RLAHPQEYSVRGDERTKVLSGLLSGTEYEIELYGVTLDQRSQPIFGVAQTGLSTPSGLSF
SEVMDSSAVVHWSMPRAPVDNYRVTYVPFEGGSPLMVTVDGDVFEAMLPNMMPGKKYQVT
VSAVKGLEESDPNTDTVITALDRPQGLTAANVTDTSALLLWQPSVATVDGYIITYSGDSV
FPVVEHVSGNTVEFEMHSLVPGTHYTVEVHAMKDAQKSDSAVTEFTTDVDPPRDLTAINI
QTDGATLTWKPPQAAVTGYTLTFYSADGVIREVVLSPTASSYNMATLTGSTEYNVRLQTI
AGAQRSRRVTTVFTTIGELYRRPKDCAQILLNGETTSGLYTVYVGGEESQPIQVYCDMAT
DGGGWMVFLRRQNGKLEFFRNWKNYTAGFGNMSDEFWLGLSNLHKITNSGHYELRVDLRD
DGETAYAQYDKLTIAEPKTRYKVYIGAYSGTAGDSMTYHQGRPFSTYDNDNDIAVTNCAL
SYKGAFWYKNCHRVNLMGKYGDTSHSKGINWFHWKGHEHSIEFAEMKIRPANFRSFENRK
KRS
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctcgaggcgttctgggctgcctcctcctgactgctttgctcagcttatcaaat
gccgggctcgtgaaaaaaatcctacggcatcgacgacagactctggtatcccctaaagag
cataacctcacactgcccaacacggatcagcccgtggtgttcaaccacgtctataacatc
aatgttcctgccagttccctgtgttcggtggacctggacgctccagagagtacggcgctc
catcctaaagatgctgcagtctcttcaggcaatcccatgactgagcatacagtcaatggg
gagaaccagatcatcttcacccaccgcatcaacatacctcggcaagcctgtggttgttcc
gacgacctgcctggcctgaaagacctcttgagccgactagaaatgcttgagggagaagtt
tcaactttgagagaccagtgcagcagtgcacaggtcacaggtgagttgggaactaaacct
tactgcagtggtcatggaaactacagcactgaaacctgtggctgcatatgcgagcctggc
tggaaggggctcaactgctctgaatccgagtgtccgaataactgccacggccagggccgc
tgcgttggcggaaagtgtaagtgcttcaagggctttgccggaaaagactgcactctggag
gtctgcactgcggactgcggtgcacacggcaagtgtgtgggcagtgtttgcatttgctcg
ggtggtttcttcggcgaagactgctctcaaacaaagtgcctcaacaactgcttaggccgc
ggccgctgtgaagatggagactgtgtgtgtgatgaaccctggactggatttgactgttct
gaagtcatctgcccaaaagactgttacgaccgtggacgctgcatgaatggcacctgctac
tgcgatgaagggtacgttggggaggactgtggtgaccgcacttgtccaaacaattgccac
ggtaatggtttctgtgtagatggccagtgtgtctgcgctgctggattcaatggagaagac
tgctctcgggtcacctgcctcaacgactgtaacgacagaggtacgtgcttcaacgggatg
tgtatctgtgacatgggctatcaaggcgcagactgcagccagttagcttgcctgaacaac
tgtaacaacagaggccagtgcataaatggacaatgtgcttgcgatgttggtttccaggaa
gacgattgcgccgagctttcctgtccaaacgactgccagcacagggggcgctgtgttaac
ggccagtgtgtgtgcgaggagggcttcgctggtgaggactgcagcatcaggacctgcccc
tcaaactgctatggccgcggcgagtgtattaagggacgttgtgtgtgtcattcagacttc
accggtgaggactgtgctgaactgagctgccccaacaactgccgaaaccgcggccggtgc
atcgatgggcagtgtatttgtgacgaaggcttcagtggagaagactgcagtcagaaagct
tgtcccaacgattgcctgggcctgggtgactgcgtcgatggcaagtgcatctgtcaagaa
ggctactcaggagacgactgctctgtgcacgcgtgtccaggcaactgcaacaacaggggg
cgctgcatcaatggaaggtgcacatgtgagagtgggtatgaaggagaaagctgtgcacag
ctgagctgcctcaataactgccaggacaaaggccgctgcgtgaacggtcggtgcgtctgt
gatgagggatacattggagaagactgctcagaagtgtctcctccaaaggaccttaatgtg
ggcgataccacctctgacacggtggacctgaactgggacaacgagatgttggtgacagag
tacattgtgacgtatgtgcccaccagtcctggtggtcttcaacagcagttcactgtggca
ggagacaaaactgctgccaccatcaaagagcttgaacctggcattgagtatctgatcagt
gtctatgctgttctgagcaacaagaagagtgtccctgtcagtgcgagggtggccacagag
cttccaaagccagagggtttaatattcaaatcagtgagagagagctcagtggaggtgatg
tgggaccaggtggacttctcctttgatggctgggagatctatttccgcaagacgaaagaa
gaaaatggaaaaatcgtgagcacccttccacctactcaaaaccagtttctccagtccaac
cttgcaccaggacaggagtatgaagtctctgttgccatcatcaagaacaacaccaaagga
ccccaaacatccaaaagagtcactaccaagatcgacggcccccgggaggtggaggtgaag
gacgtgacggactcctctgctctggtcagttggtctcagccggcggctcctatagacagt
gtcacgatggtttacgggcccagctccaacccatcagatgaaagcattgtggagatttcc
cccccggacaagcagtacagcatcgacggcctgaggccagacaccgagtacaaggtgttg
ctcatctccaggagcggagacctcaccagcgaccctaccaacaccacattcacgacagac
ctggatgcccccatggagctgcaggctgtgtcccagacagacgacagcatcacgctggag
tggactaacagtcaagctgatgttggcatttatctggtgaaatatacgaccatctccgga
gcgactcacggtgaggaaaacatcccacgaggaccaggagccaccacaaaagctactatc
agtgggctgaagccagggacggagtatgggattggtgtgacagccgtgaagaaggacaga
gagagcgtccctgctactacaaatgcagcaactgatatcgaccctcccagagtttttgaa
gaaaccgggtccacagagacctccctcgccttgaggtggcagaaacctcaggccaaggtc
ggtgcctaccggctggtgtacgtctccagagatgggcaggttgaggaggtggagatccca
gccaaagcgactagccacgtcttgttcaacctgacgcctgggatgagctacaccctcact
ttggccgcagagagggggcacaagaggagcgcacctgtcaccttatctgcatccacagag
gctgagcccgaggtggagcatctgttcgtctcggacatcacggccgacggcttccgtctg
tcgtggacggctaacgaagacttgtttgacagatatgtgatcaaaataagagacggcaaa
agattagcccaccctcaagagtacagcgttcgcggtgatgaacgaaccaaagtcttatct
ggactcttgagtggcaccgagtatgaaatcgagctttatggcgtcacgttggatcaacgc
tcccaacctatttttggggttgctcagacaggcctgagcactccaagtggacttagcttt
tctgaagttatggactcctcagcggtagttcactggtccatgcctcgcgctccagtggat
aactacagagtcacctacgtgccctttgaaggaggaagccctctgatggtgacggtggat
ggagacgtgtttgaggctatgctgcccaatatgatgcctggcaaaaagtaccaagtgact
gtgagtgcagtgaagggcctggaggaaagtgaccccaacactgacaccgtgatcacagct
ttggaccgacctcaaggtctgaccgcagcgaatgtcaccgacacctcggccctgttgctg
tggcaaccgtctgtggccactgttgacggctacatcattacttacagcggggattcagtg
ttcccagtggtggagcatgtttctgggaacacggtggagtttgagatgcactccctggtt
ccaggaacccactacaccgttgaagttcatgctatgaaagacgctcagaagagtgactct
gccgtgactgaattcaccaccgatgtggatcctcctcgtgatctcacggctattaacatt
caaacggacggtgcgactctcacatggaaacctccgcaggctgctgtgactggttacaca
ctcaccttctactctgctgatggagtaatcagggaagtggtgctgagccccacagcgtcc
tcttacaacatggctacgctgaccggctccacagagtacaacgtgagactgcagaccatc
gctggagcgcagaggagtcgtcgcgtcaccaccgtcttcactaccattggagagttgtac
agacgccctaaagactgcgctcagatcttactgaatggagagacgacctcgggtctgtac
accgtctacgtgggcggagaggagagccagcccatccaggtttactgtgacatggccaca
gatggcggaggatggatggttttcctcagacggcagaatggaaagctggagttcttcagg
aactggaagaactacaccgctggcttcggtaacatgagcgatgagttctggctgggtctc
tccaacctccataaaatcacaaattctggccattatgagctgcgagtggacttgagggac
gacggggaaacggcctacgctcagtacgacaagctcacgattgcagagcccaaaacacgc
tataaagtctacataggagcctacagtggaacagcaggtgactccatgacgtaccaccag
ggtcgccccttctccacctacgacaacgataacgatattgctgtaaccaactgcgccttg
tcctacaaaggagccttttggtataaaaactgtcatcgtgtcaacctcatggggaaatac
ggtgacaccagtcacagtaaggggatcaactggttccactggaagggccacgaacactca
attgaatttgcagagatgaagattaggccggccaacttcagaagctttgagaacagaaaa
aagcgatcatag
DBGET
integrated database retrieval system