Cottoperca gobio: 115017050
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Entry
115017050 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
cgob
Cottoperca gobio
Pathway
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115017050
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115017050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
115017050
NCBI-ProteinID:
XP_029301078
Ensembl:
ENSCGOG00000008514
UniProt:
A0A6J2QRH4
LinkDB
All DBs
Position
12:20454855..20546532
Genome browser
AA seq
1633 aa
AA seq
DB search
MDTSFAVSPLLLALLLSLHLHCHLFVWAAMDSCSDEEGALSRCMPKFENIAFNHTVVTSN
VCGSPPEDYCMQTGSTRSCHHCDASDPDQSHNVSLLTDFNRNEEPTWWQSQSMYYGVQHP
NSVNITLHLGKAFEITYIRLKFYTSRPESFAIYKRTEEDGPWLPYQYYSASCRKTYGKDA
KAYIRPGDDERMALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSVVLKEWVTATDLL
ISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASDCTEGELRGLVCSCQHH
TVGDDCQRCHPFHQDRPWARATGDSANECLKCNCSGRSDECVFDVEQYRSSGSGGRCVSC
RDNTDGPHCERCRENHHRRSAEEPCLPCNCNTNGSQGLQCDVEGRCACGVGVTGEKCDTC
RAGFHSLGPGGCRPCDCDSSGSVDDCSPLDGRCHCKPNVEGQSCDRCKPGFFNQQQVNPA
GCQACFCFGHSLACSTSNHYAAVNITSDFIEDQDGWLGEFSGGQEYPLLWKEGEVYLLPL
TEEDIGFYKAPEKFLGHQVYSYGQLLSIIFTSETAELLPDRVTLLLHGSGVTLTADLSPQ
PVLDRDPGLTSQQSFIVRLHENEMRFNPPLSALKFQRLLYNLTALRIGNAGGQNYTSQLA
GVTLTSAFISSGPANPPAPWVEFCSCPPGFVGQFCERCAPGFTREDPGGGPLSTCVPCNC
HQHGTCHPETGVCECSDFTTGMTCEHCLDGYYGNALIGTPVDCQPCPCPDRTSCAQIAVT
GQVVCTNCPAGQTGMRCQMCEDGYYGDPLGQSGAVQPCVRCDCNDNVDLNALGICDHISG
RCLKCLRHTEGDHCQRCQRGFYGDALNQTAVQKCKPCSCNPGGASGHVNECHPQTGNCQC
LGQVTGRDCSYCEVGFFNLQPGVGCERCKCNPVGSSSIACHPITGQCVCRAGVEGRLCDS
CRVGFFGFSSRGCRACNCDPMGSISMQCHSNGTCHCRRGFVGYKCDKCELNYFNNRATHQ
CEECPVCYGLVKKQAETLRTRLQDLEKLLAHFDCRGRFGKQHHLLKYHMARLPEHEHQRE
DSLPNALEDFLAFQEAREAFIKQFSSLEASTGTLLAQLNGITSTLNCSISVTEQEGDESS
KVEGSKGVCQTFTHTMFMVRASQKQLKQATLDLDGMIIPFEVASGPNKWNIMVNDSQALM
KSHGETAELIEAVAGSAVRASEQTFSLLMDLLQDNSTEEYIRNLTEQITQMQQQKENLTV
QVNDTVAQQLALQEDAAGLKLALGAVTSSLHQLALTDASSSPEPDQTQPTNHTAEWGEDL
LRQTQELDWKIQTKDDLVSKVREEMEPLKQTANKKMEMVDDISELQAHTQRAKVMALTSV
VTGKEIESDAIAVHRELQYMVREWPRRQGQTKAAMKKERPLQEKVLADVRKRVSHIEKML
KPVLENSSHSSNTTREAEQTAHAVAKQSKAILSQAKHTRTASAHLSSHIDSALQQLTAQE
MQSDRVNSQITSEPLVSLTSVTEDMEAAKLKLKAYSATLSELISKIDGSVPLERFDRILD
ETARRLSMLRGSVDSPTLGLKIQKLHSAAKDQHSRMSLIEQDLQEITEERDSLRDIALNL
PRSCPQATGAGKG
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcctttgcagtgagccctcttctcctggcccttctgctctctcttcatctg
cactgccacctctttgtttgggccgcaatggactcctgctctgatgaggagggcgcccta
agccgttgcatgcctaagtttgaaaacattgccttcaatcacactgtggtgacatcaaat
gtgtgcggctccccacctgaggactactgcatgcagactggctcaacgcgctcatgccac
cactgtgacgcatcagatccggatcagagccacaacgtcagcctcctgacagacttcaac
aggaacgaggagcccacgtggtggcagagccagtccatgtactacggtgtacagcatcct
aattctgtcaacatcaccctccacctgggaaaggcttttgagataacttatatacgattg
aaattctacaccagtcgcccggagagcttcgccatctacaagcgcacggaagaggatggg
ccctggttgccttaccagtattacagcgcctcttgtaggaagacctatgggaaggatgcc
aaggcttacattcgcccaggagatgatgagaggatggccttatgtacagatgagttcagc
gatatctctcctctgactggaggaaacgtggctttctccaccctggaaggacggcccagt
gcatacaactttgaccagagcgtggtgttgaaggaatgggtgacagcgaccgacctgctc
atctctttggacaggcttaacacctttggagacgagttcttcaaagacgctaaagtgtta
cgctcgtacttctatgccatctcggacttctctgtgggtggcagatgcaagtgtaacggt
cacgccagcgattgcactgagggggaacttcggggcctggtctgttcctgccagcatcac
acagtgggagatgactgccagagatgtcacccctttcaccaggacagaccgtgggccagg
gccactggggactccgccaatgagtgtttgaagtgtaactgcagtgggaggtcagacgag
tgtgtgtttgacgtggagcagtaccgcagctctggcagtggggggcgctgtgtgagctgc
agagacaacaccgacgggccccattgtgagcgctgcagagagaaccaccacaggagatct
gcagaagagccctgcctaccctgcaactgcaatactaatggctcacagggtctgcagtgt
gatgtagaaggaaggtgtgcgtgtggagttggcgtgacaggggagaagtgtgacacatgt
cgggccggctttcactcgctcggcccgggcggctgcaggccgtgcgactgcgactccagc
gggagtgtcgacgactgctctcctctggacggacggtgtcactgtaagcccaacgtggag
ggacagagctgtgacagatgcaagccaggctttttcaaccaacaacaagtaaacccagca
ggctgccaggcgtgcttctgctttggccactcgctggcctgctccacatccaaccactac
gctgctgtcaacatcacttctgacttcattgaagatcaggacggctggttgggagagttc
tctggagggcaggagtaccccctgctgtggaaggaaggtgaagtctacctgctgcctctt
accgaggaagacatcggcttctacaaagcccccgagaaattcctgggtcatcaagtctac
agctacggccagctcctctccatcatcttcacctctgagaccgccgagctgctccccgac
cgtgtcaccttgctcctccacggctctggagtcaccctgactgctgacctttcaccccaa
ccagtgcttgaccgtgaccccggcctcacgtcgcagcagtccttcattgtcaggcttcat
gaaaacgagatgaggtttaaccctccactgtccgcccttaagttccaacgactcctttac
aacctgacggctctccgaatcggcaacgctggaggacagaactacacatcgcagctcgcg
ggggtcaccctgacatcggcattcatctcctctggtccggccaaccctcctgccccatgg
gtggagttttgttcctgtcccccgggttttgtcgggcagttttgcgagcggtgcgcccca
ggattcacccgggaagaccccggcggagggcccctctcaacatgtgtgccatgcaactgc
caccagcatggaacctgccacccagagacaggtgtgtgtgagtgctcagacttcaccact
gggatgacctgtgagcactgcctggatggttactacggcaacgctttgattggcacgcct
gtggattgtcagccttgcccttgcccggaccgtaccagctgtgcccaaattgcagtgact
ggacaggtggtctgtaccaactgccctgcaggacagacagggatgcgctgtcagatgtgt
gaagatggttactatggtgacccactgggacaatctggggcagttcaaccgtgtgtgaga
tgcgactgcaatgacaatgtggacctcaacgcgctgggaatatgtgaccacatcagcggc
cgatgtctgaaatgcctgagacacacagagggcgaccactgccagcgctgccagcggggt
ttctacggcgatgccctgaaccagacagctgtccagaagtgcaagccttgcagctgcaat
cctggcggcgcctctggacatgtaaatgaatgccaccctcagacaggaaactgccagtgc
ctcggtcaggtgaccggacgggattgcagctattgcgaagttggattcttcaatctccag
ccaggcgtcggatgcgagaggtgcaagtgtaacccagttggctcatcgtccatcgcgtgt
catccaatcacagggcagtgtgtgtgtcgtgcaggagtggaggggagactgtgtgattct
tgccgtgtgggcttctttggattctcatcacgaggttgcagagcctgtaactgtgaccca
atgggctccatttccatgcagtgtcacagtaacggtacctgccactgtcgccggggcttc
gtgggttacaagtgtgacaaatgtgagttgaactatttcaacaacagagccacgcaccag
tgtgaggagtgccccgtgtgctacggccttgtcaagaaacaggcagaaacgctgaggact
cgcctgcaggatttggagaagctgttggctcactttgattgccgaggtagatttgggaag
cagcaccacctgctgaagtatcacatggccaggcttcccgagcatgagcaccagagggag
gactcgctacccaatgctctggaggatttcctggccttccaagaagcgcgggaggccttc
ataaaacagttttcctcgctggaagcttccacgggaactctgttagcccagctgaatggc
attacgtcgactttgaactgcagcatcagcgtgactgagcaggagggggatgagagcagc
aaggttgaagggagcaagggtgtgtgtcaaaccttcacacacactatgttcatggtcaga
gcgtctcagaaacagctaaagcaggcaacactggacctggacggcatgatcattcctttt
gaggtggcgtcaggacccaacaaatggaacattatggtgaatgactcacaggctctaatg
aaaagtcacggagaaacggcagagctcatcgaggccgtagccggcagcgcggtgagagcc
tcagagcagaccttcagtttgctgatggatctactgcaggacaactccacagaggagtac
atcaggaacctaacggagcaaattacacaaatgcagcagcaaaaggagaacctgacggtg
caggtgaatgacactgtagcccaacagctggccctgcaggaggacgctgctggtttaaag
cttgccctgggtgccgtcacatcctccttacatcagctggctctgacagatgccagctca
tcaccagagcctgaccaaacacagccaaccaaccatacagccgagtggggcgaggacctg
ctgagacagacacaagagctggactggaaaattcagaccaaagacgatctggtcagtaaa
gtcagagaggagatggagcctctaaagcagacggccaataagaaaatggagatggtggac
gacatcagcgagctgcaagctcacactcagagggcaaaggtcatggctttgacgtccgtg
gtgacggggaaagagatagaatctgacgccatcgccgtgcacagagagctacaatacatg
gtgagggagtggccccgtcggcagggccagaccaaggctgcgatgaagaaggaaagaccc
ctgcaggagaaggttctcgctgacgtcaggaaaagggtctcacacattgaaaagatgcta
aaaccagttctggaaaactccagccactccagcaacaccacgagggaggcagaacaaaca
gcacacgctgtggcgaagcaatccaaagccattctgagccaggccaagcacaccaggact
gcgtctgctcaccttagctcacatatagactcggctttacaacagctgactgcgcaggag
atgcaaagtgacagagtcaactcccagatcacttccgagcctctggtttctctgaccagc
gtcacggaagacatggaagcagccaagctcaagttaaaggcctattctgctacactctct
gagctcatcagtaagattgatgggagcgtgccgctggagcgctttgaccggatcttggac
gagacagcgcgccgcctgagcatgcttcgcgggagtgttgacagcccgacactaggtttg
aagattcagaagctgcattcggccgctaaggaccaacacagccggatgtccctcattgaa
caggacttacaggagatcacagaggagagagacagtctaagggacatcgctttaaacctg
cctcgatcctgcccccaggccacaggagcaggtaaaggctag
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