Cottoperca gobio: 115017076
Help
Entry
115017076 CDS
T07513
Symbol
nup54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
cgob
Cottoperca gobio
Pathway
cgob03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115017076 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115017076 (nup54)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115017076 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
115017076
NCBI-ProteinID:
XP_029301134
UniProt:
A0A6J2QT73
LinkDB
All DBs
Position
12:16241439..16249799
Genome browser
AA seq
570 aa
AA seq
DB search
MAFSFGGATGNPAASTTGFAFGSFGAKPTASTAAFGFGSAATTTTASSGFGTLTAPGFGA
ATTTAAAPATGFSFGSTNTGTFGGFGATTTTAAAPGSTFSFAAPANTAGGLFGNTQNKGF
GFSSGLGVGTAAGTTGFGNVLGTSTLGGFGGFNIQPAQQQPGGLFGQPAQQQGQAQPTQL
YQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNNQPVDFTQENPFCRFKAVG
YSCVPVSKDEDGFVVLLLNKKEADVRVQQQHLVETLHKFLGNNQSLTVNVDGVKALLNDQ
TEVIIYVVERSPNGTSKRIPATTLFSYLEQANIKVQLAQIGVAMSVTRTELSPAQLKQLL
QNAPAGVDPIIWEQAKVDNPEPEKLIPVPMVGFKELLRRLQIQEQMTKQHQTRVDIISSD
ISELQKNQATTVAKISQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTI
QSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLKQQQDGLSHL
ISVIKDDLEDIKLVEHGLSDSGHMRGSILS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttagttttggcggcgccacgggtaacccagcggcaagcacgaccgggtttgca
ttcggttcatttggtgccaaacctacagcatcaacagcagcatttggctttggctccgca
gccaccaccaccaccgcctcatccggattcggcacacttacagcccctggttttggggca
gccaccaccactgctgctgcaccagccacaggatttagttttggctccaccaacactggt
acatttggtggctttggggcaacgacaacaactgccgctgcaccagggtccacttttagc
tttgcagctcccgccaacaccgcaggaggcctgtttggtaacacacagaacaaaggtttt
gggttctcctctgggcttggcgttgggaccgctgctgggacaacaggatttggaaatgta
ttgggaacatccacccttggtgggtttggaggctttaatatccagccagctcagcagcag
ccaggaggcttgttcggccagccggcccagcaacagggtcaggctcagcccacccagctc
taccagcaggtcactgctctgtcagctcccaccttgttaggtgatgaacgtgactccatc
ttagccaaatggaaccaattgcaggcttactggggcactgggaagggctactacagcaac
aacaaccaacctgtcgacttcacccaggagaacccattctgcaggttcaaggcggtgggc
tatagctgcgtccctgtgagtaaggatgaggatggttttgtggtcttgcttctcaataaa
aaggaagctgatgtgcgagttcagcaacagcatctggtggagacgctccacaagttcctg
ggaaacaaccagtcgctcactgtcaatgtagacggagtcaaagccctgctcaatgaccag
acagaggtgataatttacgtggtggagcgttctccaaatggcacctccaagcggatcccc
gccaccacgctcttcagttatttggagcaggccaacatcaaggtccagctcgcacagatt
ggagtggccatgtcggtgacgcgcacagagctgtctccagcacagctaaaacagctgctg
caaaatgcacctgcaggagtggatcccatcatttgggagcaggctaaggtggacaaccct
gaaccagagaaattaataccagtgcccatggttggttttaaggagctgcttcgcaggctg
caaatccaggagcagatgaccaaacagcaccagaccagagtggatattatttccagtgac
atcagtgaactgcagaagaaccaggcgaccacagtggccaagatttcccagtacaagagg
aagctgatggatctctctcacagggtgctgcaggtgctgatcaaacaagagattcagagg
aaaagtggttatgctatccaagtggacgaggagcacctcagggtgcagctggacaccatt
cagtctgaacttaatgcccccacacagttcaagggtcggttgaatgaattaatgtctcaa
atccggatgcagaatcactttggagctgtgagatcagaagagcgatacagtgttgatgca
gacctcctcagggagatcaaacaacacttgaaacagcagcaggacggcttaagtcatttg
atcagcgtcatcaaagatgacttggaagacatcaaactcgtagagcacgggctgagtgac
agtggacacatgagaggaagcatcctgagctga
DBGET
integrated database retrieval system
