Cottoperca gobio: 115017100
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Entry
115017100 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: rab GTPase-activating protein 1-like
KO
K20284
Rab GTPase-activating protein 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115017100
Membrane trafficking [BR:
cgob04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115017100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
UPF0242
PTB
Motif
Other DBs
NCBI-GeneID:
115017100
NCBI-ProteinID:
XP_029301179
Ensembl:
ENSCGOG00000006824
UniProt:
A0A6J2QTC0
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All DBs
Position
12:complement(11531846..11600761)
Genome browser
AA seq
1089 aa
AA seq
DB search
MDDKGSVGKISVSSDSVSTLNSEDFVLVSRLGDETPSSTNNGSDDEKTGLKVISEEGVSF
KIVGNGSEQQLQRELEDVLMDPSVADTGLRSEAGMDSLSGGDHGPLPTTASPVPPGSDPL
SAPPPKLEMVLPVQTAQESELNERSYRADESSSEGSPGSPIPDEDSVVFSQLTYLGCASV
NAPRSEVEALRMMSILRGQCQLPLDVTLSVPGVSEGTVRLLDPNFSTEIANYPIYKILFC
VRGHDGTPESDCFAFTESHFNAEIFRIHVFRCQIHEAVSRILYSFATAFRRSAKKAVLSS
QQPAPLTPDSDLFTFTVSLEIREDDGKGTFSAVAKDKDKQSFKLRAGMDKKVVIYVQQTS
NKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQFQPVNE
ETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNDRLFWPFSKRNYTETFYLKLR
QMERKERKSPASDTLYEVVSLESETEREKRKTTASPGIVPTGTTVPSPPEDDEEEDNDEP
LLSGSGDVSKECAEKILETWGDLLSKWHMNLSVRPRQLPALVRSGIPEALRGEVWQLLAG
CHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVY
DEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNFEDLHCKFFQLERL
MQEYLPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVAL
ALLKTSKDDLIQTDFEGALKFFRVPVPKRYRSEENAKKLMELACSMKISQKKLKKFEKEY
HTLREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNAEEKA
DALNKELLLTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEYKQIC
SQLSERLEKQQTANKGELEKIRFKVEGCEKCSSLFNKEGRVRRAVTTTSAGGTEETDEEK
ESLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIKTV
TGTQGKETA
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaagggctcggtggggaagattagcgtgtcttcggactcagtgtccactctc
aacagtgaggactttgtccttgtgtcccggctgggggatgagacaccctcctccactaat
aatggtagtgatgacgaaaagacaggactgaaggtgatttctgaggaaggggtcagcttt
aagattgtggggaatggaagtgagcagcagctccagagggaattagaggatgtcctcatg
gacccatcggtagccgacactggactcagatcagaagcaggaatggacagccttagtggg
ggcgaccatggccctcttcccactacagcgtcacccgtaccgccgggctctgaccctctg
agtgcaccgccacccaagctggagatggtgcttcctgttcagacggctcaggagagtgag
ctgaatgagagatcgtaccgagcagatgaatcatcatcagagggcagtcctggcagtccc
atcccagatgaggacagcgttgtgttcagccagctgacatatctggggtgcgcctcggtc
aacgccccccgcagtgaggtggaggccctccgtatgatgagtatcctcagagggcagtgc
caactgccactggatgtcacactgtctgtgccaggcgtttccgaaggcacagtcaggttg
ctggaccccaatttcagtacagagatcgccaactaccctatatacaagattctgttctgt
gtgcgaggccatgatggcacaccagagagcgactgctttgccttcactgagagccacttc
aatgctgagatcttcaggatccatgtgttccgctgccaaatccacgaagcggtgagtagg
atactgtacagctttgccacagcgtttcggcgctcagcgaagaaggcagttctgtcatct
cagcagccggctccgctcacacctgacagtgacttgtttaccttcaccgtcagcctggag
atcagggaggatgatggcaagggtactttcagtgctgtggcaaaagacaaggacaagcag
agcttcaagttgcgtgcaggaatggacaagaaagttgtcatttatgtccaacagacctcc
aataaagaactggctattgagaggtgtttcggtctcctgctcagcccagggaaaaatgtg
aagaacagcgacatgcacctgctagatctggagtcaatgggaaagagttccgacgggaag
tcttacatcatcacaggaagttggaaccccaacacgcctcagttccagcctgtgaatgag
gaaacgcccaaagataaattcatgtacatgacgacagcagtggacctggtgatcacagag
gtggaggagccggttcgttttctgctcgagacgagggtcagagtctgctccccaaatgac
aggctgttctggcccttcagcaagcgtaactacactgagaccttctaccttaaactacga
cagatggagcgtaaggagcgtaagagtcctgcctctgacacactttatgaggtggtgagt
ttggaaagcgagactgagagagagaaacggaagaccacagctagtcccggcatcgtgccc
accggtaccacggtcccgtcaccacctgaggatgatgaagaggaagataatgatgagcca
ttactcagcgggtcaggtgacgtttccaaggagtgtgcagagaaaatcctggagacctgg
ggggacttgttatccaagtggcatatgaacttatcagtgcgtcccaggcagctgccagct
ttggtgcggagtggcattcctgaggctctccgaggggaggtgtggcagctcctggcaggc
tgccataacaatgaccaccaggtagaagagtaccgcactctaattacaaaggagtcccct
caggacagtgccatcaccagggacatcaacaggacattcccagctcatgactacttcaaa
gacactggaggagatggacaagactccctctacaagatctgcaaggcttactctgtgtac
gatgaggagattggctactgccagggacaatccttcttggctgctgtgctgctgctgcac
atgccagaggagcaagccttcagtgtgctggtcaagatcatgtttgattacgggctcagg
gaccttttcaagcagaacttcgaagatctgcattgcaagttcttccaacttgagagactc
atgcaggaatatttaccagacctgtacaaccatttcctgaatgtgggtctggaggctcac
atgtacgcctctcaatggttcctcaccctcttcacggccaagttccctctttatatggtc
ttccatatcattgacctgctactgtgtgagggcatcagtgtgatcttcaatgtagccttg
gcacttctgaagacatcaaaagatgatctgatccaaacagacttcgagggtgctctgaaa
ttctttcgtgtcccggttccgaagaggtaccgctctgaggaaaacgcaaagaaactgatg
gagctggcctgtagcatgaagatcagccagaaaaagctgaagaaatttgaaaaggagtac
cacaccttgagggagcagcaggagcaacaggaggcccccatcgaaagatacgagcgggag
aaccgtcgtctgcaagaggctaacatgcgtttggagcaggagaatgacgacctggcacac
gaactagtcagcagcaagatagcccttcgcaaagacctcgacaacgctgaggagaaggcg
gacgccctgaataaagagttgctgctgaccaaacagaaactggtggactctgaggacgag
aagaggcgactggaggaagaatctgctcagctgaaggagatgtgcaggcgagagctcgat
aagtctgaatcagagataaagaagaacggctccattattggagaatataagcagatctgc
tcccagctgagtgaacgactggagaagcaacagacagccaacaaaggagagctggagaaa
atccggttcaaagtggaaggctgtgagaagtgcagtagtcttttcaacaaagaaggtcgt
gtgcggcgcgctgtgaccacaacctctgcggggggaaccgaggagacggatgaggagaag
gagagtttgaagaatcagctgagagagatggagctggaactagcccagaccaaactgcag
ctggtggaggctgagtgcaaaatccaggacctggagcaccacctgggtctggccctcaac
gaagtgcaggccgccaagaagacctggttcaaccgaacgctcagctccatcaagaccgtc
actgggacgcagggcaaggagaccgcctaa
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