Cottoperca gobio: 115017313
Help
Entry
115017313 CDS
T07513
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
cgob
Cottoperca gobio
Pathway
cgob04142
Lysosome
cgob04144
Endocytosis
cgob05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115017313
04142 Lysosome
115017313
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115017313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115017313
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115017313
Membrane trafficking [BR:
cgob04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
115017313
Exosome [BR:
cgob04147
]
Exosomal proteins
Proteins found in most exosomes
115017313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
115017313
NCBI-ProteinID:
XP_029301479
Ensembl:
ENSCGOG00000013796
UniProt:
A0A6J2QU47
LinkDB
All DBs
Position
13:complement(4423829..4446550)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDLADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKDAELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVEGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
SHPPDAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQTHNNKSVNEALNNLFIIEEDYAAVRTSIDAYDNFDNISLAQGL
EKHDLIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLN
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYTAAPGYGQPPQPN
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgcttccaggagcacctgcagctccagaacctgggcatc
aacccagccaacattggattcagcactctaaccatggagtctgacaagttcatctgtata
agagagaaagtgggtgagcaggcccaggttgtcatcatcgatttggccgaccccaacaat
cccatccgtaggcccatctctgcagacagcgccatcatgaaccctgccagcaaagttatt
gcccttaaagacgcggcaaagaccctgcagatcttcaacattgagatgaagagcaagatg
aaggctcacacgatgacggatgacgtgaccttctggaagtggatctcactcaacaccgtt
gccctggtgacggacaatgccgtctaccattggagcatggagggtgattctcagccaatc
aaagtgttcgaccgtcactccagcctggcagggtgtcagatcatcaactaccgcactgac
gccaaacagaagtggttgctgctcattggcatttcagcacagcaaaaccgtgttgtcgga
gcgatgcagctgtactccgtggacaggaaggtgtctcagcccattgaggggcatgccgct
ggctttgcacagttcaaaatggagggcaacactgaagaatcaaccctgttctgctttgct
gtgcgtggacaggcaggaggaaagctgcatatcattgaagtggggactccgcctactggg
aaccagccatttccaaagaaagctgtggatgttttctttcctccagaagcccagaatgac
ttccctgttgccatgcagatcagttccaagcaagatgtcgtctttctcatcaccaaatat
ggctacatccacctgtatgacctggagactggaacttgcatctacatgaacaggatcagc
ggggagaccatttttgtcactgccccccacgagcccactgctggtatcattggagtcaac
aggaaaggacaggtgttgtcggtgtgcgtcgaggaggaaaacatcattccctacatcacc
aatgtgctccagaacccagacctggctctccgcatggctgtccgcaacaaccttgccggt
gctgaggaactgtttgcccgcaagttcaacaccctcttcgcagcggggaattactccgaa
gctgccaaggtggcggccaatgcacccaagggtatcctgcggaccccagacaccatccgt
cggttccagagtgttccagcccagccaggccagacgtctcccttgctccaatactttggc
atcttgctggaccaaggccaactcaataagtttgaatctctggagctgtgcaggccggtc
ctccagcagggccgcaagcaactgctggagaaatggttgaaagaggacaagctggagtgc
tctgaggagcttggagacttggtaaagtctgtagatcctactcttgccctcagcgtctac
ctcagagccaacgtccccaataaggtcattcagtgctttgcagagacgggacagttccag
aagattgtcctctatgccaagaaggtgggctacactccagactggatcttcctgctaagg
aacgtaatgcggatcagtccagagcagggccttcagttctcccagatgctggtccaggat
gaagagcctcttgctgacattacacagattgttgatgtgttcatggagtacaacctgatc
cagcagtgcacatccttcctactagatgccctgaagaacaacagacccatggagggacca
ctgcagacacgcctgctggaaatgaacttggtgcatgcaccacaggttgcagacgccatc
ctaggcaatcagatgttcacccactatgatcgtgctcatgtggcacagctgtgtgagaag
gccggtctcctgcagagggcgctggagcattatactgacctgtatgatattaagcgcgct
gtggtgcacacgcaccttctcaacccggagtggttggtgaatttctttggctccctgtca
gtggaggactctctggagtgtctgagggccatgttgtcagcaaacattcgccagaacctg
cagatctgtgtccaggtcgcctccaagtaccatgagcagctcactactcagtccctcact
gaactttttgagtctttcaagagctttgaaggtttgttctacttcttgggttctattgtg
aacttcagccaggacccagaggtccacttcaaatatatccaggccgcctgcaagacgggc
cagatcaaagaggtggagagaatctgccgagagagtaactgctacgaccctgaacgtgtg
aagaacttcctcaaggaagccaagctgactgaccagctgcctttgatcattgtgtgtgac
cgctttgactttgtccacgatctggtcctgtacctgtaccgcaacagcctgcagaaatac
atcgagatctacgtgcagaaggtgaacccaagccgtctgccggtagtcattggaggatta
ctggacgtggattgtgctgaggatgtgattaagaacctgattatggtggttagagggcag
ttctccactgatgaactggtggctgaagtggagaaaagaaatcgactgaagctactgctg
ccttggttagaggctcgtattcatgaaggttgtgaggagcctgctacccacaacgccctg
gccaagatctacatcgacagcaacaacaaccctgagcgcttcctgagggagaaccctttc
tacgacagccgtgtggtgggcaagtactgcgagaaaagagacccccacctggcctgtgtg
gcctatgaaagaggacaatgtgaccaggaactgattcatgtgtgcaatgagaactcgctg
ttcaagagtctgtcccgctaccttgtgcgtcgcaaggatgcagagctgtgggcgagcgtt
ctgctcgagaccaacaactacagaagaccactcatcgaccaggttgttcagacagccttg
tctgagacccaggatccagaggaggtgtctgtcacagtcaaggccttcatgaccgccgac
cttcccaatgagctcattgagcttctggagaagatcgtcctggataactctgtctttagc
gagcacagaaacctccagaatctgctcatcctgacagccattaaagctgatcggacacgt
gttatggagtacatcaaccgtctggacaactatgatgcccctgacattgcgaacatcgcc
atcagcaacgagctgtttgaggaagcctttgctatttttaaaaagtttgatgtcaacacc
tctgcggtgcaggttctgattgagcacatcggtaacttggaccgagcttatgagtttgct
gagcgctgcaacgagccaccggtgtggagtcagctggcaaaggcccagctccagaagggc
ctggtcaaagaagccatcgactcttacatcaaggccgatgacccctctgcttacatggag
gtgggacaagctgctgctcaaagcggaaattgggaagacctggtgaagtttctgcagatg
gcccgtaagaaggcccgcgagtcgtacgttgaaacggagttgatctttgcgctggccaag
accaaccgcctggctgagctggaagagttcatcaacggacccaataacgctcacattcag
caagtgggtgaccgttgctatgacgacaagatgtacgacgcagccaaactgctttacaac
aacgtctccaacttcggccgtctggcctccactctggtgcacctgggagagtaccaggca
gctgtggacggagcgcgcaaggccaacagcactcgcacctggaaggaggtgtgttttgcg
tgtgtagaaggaaaagagttccgtcttgcccagatgtgcggcctgcacatcgtcgtccac
gctgatgaactggaggaactcatcaactactaccaggaccgcggttactttgaggagctg
atcaccatgctggaggccgccctggggctggagcgtgctcacatgggtatgttcacggag
ctggccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttc
tggtcccgtgtcaacatcccaaaggttctcagggcagcagagcaggcccacctctggggg
gagctcgtgttcctctacgacaagtacgaggagtacgacaacgccatcatcaccatgatg
agccatccacccgacgcctggaaggagggccagttcaaagacattgtcaccaaggtggcc
aatgtggagctgtactacaaggccgtgcagttttatctggagttcaaaccattgttactg
aacgacctgctcatcgtcctctctcccagactggaccactcacgcgctgtcaacttcttc
agcaaggtgaaacagcttcctctggttaaaccgtacctgaggtctgtccagactcacaac
aacaagtctgttaatgaagcactcaacaacctcttcatcattgaggaggactatgcggcc
gtgcgtacttcgatcgacgcctacgacaactttgacaacatctcactggcccaagggctg
gagaagcatgatctgattgagttcaggaggatcgcagcctaccttttcaagggcaacaac
cgctggaaacagagtgtggagctctgcaagaaggacaagctctataaggatgccatgcag
tacgcatcagagtccaaagacatcgagctggcagaggagctcctggcttggttcctgaac
gaggacaagaaggagtgttttgcagcctgcctattcacctgttacgacctgctgcggccc
gacgtggtgctggagaccgcctggcgacacaacatcatggacttctccatgccatacttc
atccaggtcatgagggagtatctctctaaggttgatgcgataaaggaaaaggtggacaaa
ctcgaagcctccgagtccctgaggaaacaggaggagcaggctaccgagtcccaacctatt
gtttacggcacaccccagctcatgctcacagcaggccccaacgtggccgtgcctccccag
cagccctatggctacggctacacagcagcaccaggctacggccagcccccacagcccaac
ttcggttatggcatgtga
DBGET
integrated database retrieval system
