Cottoperca gobio: 115017324
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Entry
115017324 CDS
T07513
Symbol
atg16l2
Name
(RefSeq) autophagy-related protein 16-2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
cgob
Cottoperca gobio
Pathway
cgob04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115017324 (atg16l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115017324 (atg16l2)
03029 Mitochondrial biogenesis [BR:
cgob03029
]
115017324 (atg16l2)
Membrane trafficking [BR:
cgob04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
115017324 (atg16l2)
Others
Specific organelles associated proteins
Auto phagosome
115017324 (atg16l2)
Mitochondrial biogenesis [BR:
cgob03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115017324 (atg16l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ATG16
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_NWD2_C
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_NOL10_N
Beta-prop_RIG_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
115017324
NCBI-ProteinID:
XP_029301504
Ensembl:
ENSCGOG00000001907
UniProt:
A0A6J2QU72
LinkDB
All DBs
Position
13:complement(614055..634626)
Genome browser
AA seq
610 aa
AA seq
DB search
MAAVTGNTRTVMTDSTGESQRGGRVLAPGRGGRSAETRWKRHIVGQLKHRDLSQHAKFQD
LIRFYTQLLDRTTLTKGILSGSVRRPSSDSSISSLLHRNNQLKKTTGELAYQVVQLQQQI
KIKECVLGEQHARRAEERRRLAGAFDARQELHERVEQVQEENGGLKTDYDALLERQRGAE
TKLREEKVRGGRLLEDMIHLKQQAAAHMNSRNERKSRAREANLQKELQTAARSKVTMDSC
SSAPTSRSSSPNTADRTESSERRHRLFRSASVTSPRILSSIRELFQKRRGHSVSSLQEDL
QRPVGICVSARVPERALHTLEAHEQGINAVRFSSSSDLLATGGTDRVIKLWEIRAGALTH
RATLGGSTEGITCIEFDPTGLRILAASYDKSALLWRLDDSVPKLTLTGHSRKVTAARFSG
CLHQVVTGSADRTIRLWDLHRAACVRVVEVASYCSDLICSENCIISGHFDSKIRVWDTRT
VSCVQEIPAQGKVTSLDISSDHRQLLSCCRDDCLQLVDLRRRSNERMCFRADGFKCGSDS
TKAVISPDGCFLAAGSADGAVYIWNVSTGNLESRLPDKHSSSISAVSWSLSGEYVVSVDK
SRRAILWSDI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtgaccggcaacacccgcacagtcatgacagattctaccggagagtcgcag
cgcggcggccgggtcctggctccgggacgcggcggcaggtcggcggagacccgctggaag
agacacatcgtcgggcagctgaagcaccgagacctgagccagcacgccaagttccaggac
ctgatccgcttctacactcagctgctggacagaaccactctgaccaagggaatcctgagc
ggctccgtcagacgtccctcctctgacagtagcatctcctctctgcttcaccggaacaac
cagctgaagaaaactacaggagagctggcctatcaggtggtgcagctgcagcagcagatt
aaaatcaaagaatgtgttctgggggagcaacatgccagacgggcggaggagcggcgccgg
ttggcgggtgcgtttgatgctcgtcaggagctgcatgagcgggtggagcaggttcaggag
gagaacggggggctgaagacagattacgacgccctgctggagcgccagaggggggcggag
acaaaactccgggaggagaaggtgagagggggacggctgctggaggacatgatccacctg
aaacagcaggccgccgcccacatgaacagccgcaacgaacgcaagtccagagctcgagag
gctaacctgcagaaggagctgcagaccgctgcgaggtcaaaggtcaccatggacagttgt
tccagcgctccgacctccagatcctcgtctccgaacactgcggaccggaccgagtcctcc
gagagacgacaccgactgttcagatcagcgtcggtgacgtccccgaggatcctctcctcc
atcagagaactgtttcagaagaggcggggccactcggtcagcagtctgcaggaggatctg
cagcgtcctgtcgggatctgtgtgtccgccagagtccctgagagggcgctacacacactg
gaggcccatgagcaaggcatcaacgctgtgaggttcagctccagttcagacctgcttgcc
actggaggaaccgaccgagtcatcaaactgtgggagatcagagcaggcgcgctgactcac
agagcgactctgggcggcagcacagagggaatcacctgcatcgagttcgaccccacgggt
ttgaggatcctcgcagcctcgtacgataagtcggccttgttgtggcggctggacgattct
gttcccaagttgactctcacaggtcacagcaggaaggtaacagcagcccgcttcagcggt
tgtcttcatcaggtggtgacgggcagcgcagacagaaccatcaggctgtgggatctgcac
agagccgcctgtgtgcgggtagttgaagttgcgtcgtactgcagtgacctgatctgctct
gagaactgtatcatcagcggacacttcgactccaagatcagagtctgggacaccaggacg
gtcagctgtgttcaggagattcctgctcaggggaaagtcacctcgctggacatcagctcc
gaccatcggcagctgctcagctgttgccgtgacgactgcctccagctggtcgacctgagg
aggcggagcaacgagcgcatgtgcttcagagctgacggcttcaaatgtggcagcgacagc
acgaaggcggtgatcagtccagacggttgcttcctcgcggccggatcagctgacggtgca
gtttacatctggaacgtctccaccggcaacctggagagccgcctccctgacaaacacagt
tcgtccatcagtgccgtgtcctggtctctgtccggtgaatatgtcgtcagtgtggacaag
agtcggcgggccatcctctggagtgacatctaa
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