Cottoperca gobio: 115017452
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Entry
115017452 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cgob
Cottoperca gobio
Pathway
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115017452
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgob04812
]
115017452
Cytoskeleton proteins [BR:
cgob04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115017452
Intermediate filaments
Intermediate filament-binding proteins
115017452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
TMP_3
Motif
Other DBs
NCBI-GeneID:
115017452
NCBI-ProteinID:
XP_029301754
UniProt:
A0A6J2QUW0
LinkDB
All DBs
Position
13:20161367..20243333
Genome browser
AA seq
2709 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPSSSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIEAE
EIVNRYEALASDLLDWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPFVPHDGKLISDINKAWERLEKAEHEKGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELGAEMEAEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEDTQVQLLSKDFGKHLLEVDDLLQKHSLQEADITVQAERVETLNTSALKFTTIEGYQ
PCDPQVICNRVNHVSTCLEELKQLAAKRREELEESRQLWAFFQELEESEAWIREKSSILG
TQGYGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQERIMEV
KGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEAIDKHRLHVLALRKHMVALPLRYRDQEEVQMRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEMVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKGQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVMALQRRLSTMEGALSVLEPKLLHLQEEAEHM
ATAHPGRAMEVLVPFDGISVEWEELKCTLQGCEDSLTVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNNLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESDEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSERIKERIDTLANRGNQNRE
LAQQWLDKLNDQWELQRFLQDCLELGDWVCEKMLMARDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSQVVRMKLEEIRECWQDLESTTQAKARQLFESNKA
DLLVQSYESMDQRLGQLECQLAYVDQGQDLTTVNKQLKKLHTMESQMEEWYKEVGQLQVQ
VASIPQQTQIKETVAERQAVVEARMVRLIEPLKERRRILLASKEVHQVGRDLEDEILWVQ
ERLPMAMSQEHGSSLQAVQQLMKKNQTLQRELQGHRSRIDDVLERAGIIASIRSPEADYA
RAGHDQLAQLWALLWHETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDCEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDYEHVTVLQEKFTDF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREVLAQIEDKHRRLPEVRARQGSTANTSTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQFWKELLTSCEECRVQITTETDKLRFFGMVR
DQITWMESIICQIGTGEKPRDVSSVEVLMNYHHSLKSEVEARTRSTLDCIEMGKTLLAAR
NPAAEEIKEKLDKVITKQYELSEKWDKHWEVLQQLLEVHQFAQEAVVAEAWLTAQEPLIS
SNEFGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPQDALPSASTLPRLPLSPVMRQTIYEQNEANSPQSPSPATPTPSPSSVARRLGSTV
ANYTPVMNGSSYRNTLEARHGGVVGVAAGLGQPAPFSIASVATAAMLVSANQVRESTSTA
RDQATKVMSHLQPVQAARTLDVKSSPYLRQPKIKHMDDAVTPLIVASRLEKARERERGRE
RELMMGEIGTERAEVAVMAEVVLQEPGRERLHSEPTRGPRGSRTDPLGQAEPQVHTHGHH
RIERQLSSEQLIQARRDELPQEVWREQAERREKRTLERQTSSEQEGLGGHEGRRRERDRH
RLERQESSEHDTGKEHSDKRSGGGEKRSTMAEIVEQLQEREAAQARGEVPRLPNGVPEKS
GKQTLDRPRARDRPKPRRRPRPKEQGETTRRSRSAPAQSSPTVPQQPTHTAHHEGFLFRK
LDIETLKKSTNRSWVNLYCVLNKGEMGFYKDAKNTTTSYNNEPLLNLSHCHCDVTNGYKK
KKNVFTLKTKDGSEFLFHAKDEDDLRVWVTNITASITEYEEIAKWGQPQPTTSSTDEGTR
RDGSKADNRSERGGERSDRAERIEQADKENEKEREIDKEKERERGERSEKSERGGKSEAK
RSEKSGKKK
NT seq
8130 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctccccagacctggacaacgcggaagcccagcgccagctcaacaacaac
aaccgaccaagcagctcgggattctgggagacagagtgtaccagctccaagctgttcgag
tgctcccgcatcaaggccctggcagatgaacgtgatgcggtgcagaagaaaacctttacc
aagtgggttaactcccatctggccagagtgtcctgtcgcatagctgacctctacaacgac
ctgagggatggatacatgctcaccagactgctggaggtcctcagtggagagctgctgccg
aggcctacacgaggtcgtatgcggatccactgcctggagaacgttgacaaagctctccaa
ttccttaaagaacagagggttcacctggaaaatgttggttcccatgacattgtggatgga
aaccaccgcctcaccctgggccttatgtggaccatcatcctacgcttccagatccaggtg
atcaaaatagagacagaggataacagagaaacccgctctgccaaggatgccctgctgctc
tggtgccagatgaagaccgcagggtaccctgaggtcaacatccagaacttcaccacctgc
tggagagacggcctcgccttcaacgccctcatacacagacacagacctgatcttatagag
ttccacaagctgacgcggtccaatgcaacccacaacctccagcaagccttcaacatcgct
gagcagcacctgggcctcaccaaactcctggaccctgaggatgtgaacacagagaaccca
gacgaaaagtccatcatcacctatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggagggcaaaagggttggcaaggtactagacaactgtattgaggccgaa
gaaatcgtcaaccgctatgaggctctggcgtcagacctgctggactggatagaaaagacc
atcgcggtcatcagcaaccagaagtttgccaactcgctgaccggagttcagcagcagcta
caggcttttacaacctactgcaccatagagaagcccatcaagtttcaggagaaggggaat
cttgaggtccttctgttcaccatccaaagcaagctcagagccaacaaccagaaacccttt
gtgcctcatgatgggaagctcatctcagacatcaacaaggcctgggagaggctggaaaag
gcggaacatgagaagggtgtggctctgcgtaaggagctgattcgtcaggagaagctggag
ctgctggctcagtgctttgaccacaaaaccaccatgagacaagcctggctgaatgagaac
cagagacttgtatcacaggacaattttggctatgaccttccagcagtcgaggcagcaatg
aagaaacacgaggccatcgaggcggacatagcctcgtatgaagagcggattggcgtggtg
gtggaacttggtgcagagatggaggcagaaggatactacgacatacggcggatcttggca
cgaaaggaaaacatcctgggccagtggagtctgctgaaggagctggtggctgggaggagg
acccggctagagaagaacctcgccctgcagaagacttttcaggacatggtctacatgatc
gactggatggaggacacacaggtccagcttctgtccaaggactttgggaagcatcttttg
gaggtggacgacctgctgcagaaacacagcctgcaggaagccgacatcacagtgcaggct
gagagggtcgagacactcaacacctctgcactcaaattcaccacgatagagggttaccaa
ccgtgtgacccacaggtgatctgtaaccgtgtcaaccatgtctctacctgtctggaggag
ctgaaacaactggcagctaaaaggcgcgaggagcttgaggagtcgagacaactgtgggcc
ttctttcaggagctggaggagtcggaggcctggatcagagagaagagctccatcctggga
actcagggttatgggaaggacctgagcagtgtgctgaagttactacaaaaacacaagact
ctggctggagaactgctggctcaccggtcgctgctgcagaacaccatgaaacgaggaaag
cagatcctgagtgagaagagctttggcacggcggggatccaggagcgcatcatggaggtg
aagggcgagtggaagaggctggaggaccaggccgcgcagcgtcttggccacctgcaggag
gcgctaaacttttttcagttctccacggagacggacgacctggtggcttggctgcaggac
gcttaccgcctggtctccagcgaagactttggacacgatgagtactccacccagtccctt
ctgaagaaacacagaggggtcagcgaggccatcgacaaacatcgtctgcatgtactggca
ctgcgcaaacacatggtggcgctgcctctgcggtaccgtgatcaggaggaggtgcagatg
cgtatgggagaggtggagcagctgtataccgaggtggccgaggttgcagtgctcagacag
cagtggcttcatgacgccctcgccgtctaccgcatgttcagcgaggtcaatgcctgcgag
ctgtggattgatgagaaggagcagtggttggacaagatggagatcccagagagactggag
gatgtggagatggtggcacacaggtttgagagcttggaccaggagatgaacagcctgatg
ggaaggatcctggacgttaaccagatagttcagcagctcctggatggaggtcatccgtcc
tctacagaggtcagaggatgtcaggatcacctcaactccaggtggaacagcattgtggag
ctggttgagcagaagaaaggtcagctggactccatgttacgcctgcagaactacctgctg
gagtgtgccgagatcaagtcccagatccaggacaagagaaaagccatcgacgccactcag
tacatgggcagcgacctgggaggagtcatggctctgcagagacgcctctccaccatggag
ggggccctgtctgtcctggagcccaaactactgcatctccaggaagaggcggagcatatg
gccaccgcccaccctggtcgggccatggaggttctcgttccgtttgatggcatcagtgtg
gagtgggaggagctgaaatgcaccctgcagggctgtgaggactcgctgacggtggctagc
aggctgcagagcttcattcaggacctggactctttcctcacctggttggtccagacgcag
acggccgccgcctcagaccagctgcccaacaacctagaagaggccgagaaactcatcaac
aaacacgctgccctgaaggaggagattggacggtatgaagaggactacgagcgcctgcag
gccatgaacgagctgctggagtccgatgaggctcctcttcctcaggccgccctgcagcag
tggctccagaagctcgatgtcggctggaacaaactgctggagatgtgggagagcaggaga
gaagttctggtccaggctcacattttccatctgttcctgcgagatgtcaaacaggccgag
tccttcctcaacaaccaggagtcggccctcgctcacgtggagctgcccaccacggtggaa
acagtcgaagccgccataaagaaacacaaggacttcaccaccaccatggagctgaatctg
cacaggatcaaagctgtgatcgaggctggagagagtctgatcagccagagcaacatctac
tctgaacgcatcaaggagcgcatcgacaccctcgccaacaggggaaaccagaacagagag
ctggcccagcagtggctggacaaactgaacgaccagtgggaacttcagaggtttcttcag
gactgtcttgagctgggggactgggtgtgtgagaagatgctgatggcgagggacagcagc
cgagacgagacccagaagcttcataagaaatggctgaagcaccaggccttcatggcagag
ttggcccagaataaggaatggctggacaaaattgaaaaggagggtcagcagctgatccag
gagaagccggagctcagccaggtggtccggatgaagctggaggagatcagagagtgctgg
caggacctggagagcaccacccaggccaaagcccgccagctctttgagtccaacaaggcc
gacctgctggtgcagagctacgaaagcatggatcagagacttggccaactggagtgtcaa
ctggcctatgtggaccagggacaggacctcactactgtcaacaagcagctcaagaaacta
cacaccatggagagccagatggaggagtggtataaggaggtggggcagctccaggtgcag
gtggcctccatcccacagcagacacagatcaaggagacggttgcagagcgtcaagccgtc
gtagaggccaggatggtgcgtctgatcgagccactgaaggagagacgacgcatcctgctg
gcgtccaaggaagttcaccaagtcggacgagacctggaggatgagattttgtgggtccag
gagcgcctcccgatggccatgtctcaggagcacggctcctctctgcaggccgtccagcag
ctcatgaagaagaaccagacacttcagagggagctccagggccacaggagcaggatcgac
gatgtactggagagggcgggtatcatcgcttccatacgcagcccagaggccgactatgcc
agggcgggccacgaccagctggcccagctgtgggctctgctctggcacgagactgagaga
aggcagctggtcctggacgccatgtaccaggcccagcagtactactttgacacagccgaa
gtggaggcctggctgagcgagcaggagctgcacatgatgaacgaggagaaggggaaggac
gagccgagcacactgcagctgctgaagaaacacttagtcctggaacagaccatcgaggac
tacgctgagaccatcggcctgctgtcacagcaatgtcgacagctgctggagatggggcat
ccagactgcgagcagatcagcaagcgtcagtcgcagatcgaccgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctctaccagctc
aacagggaggttgacgagctggagcagtggatcgctcagagggaggtggtcgccagctcg
cctgaactgggtcaagactatgagcatgtcactgtcctgcaggagaagtttacagacttt
gcatcagagacgggcagtgtgggacaggagcgagtgacagccgtcaaccagatggtggat
gagctcattgactatggccactcagaggcggccaccatcgctgaatggaaagatggggta
aacgaggcctgggccgacctactggagctcatggagacccgggcgcagatgctcgccgcc
tcacaccagctgcacaagttcttctctgactgcagagaggttttggcccagattgaggac
aaacatcgaaggctgccggaagttcgagctcggcagggcagcactgccaacaccagcacc
ctgcagagactcctgcacagctttgaacaggacatacagctgctggtcacacaagtgcgt
cagctgcaggagagtgccgcgcagctgaggacggtgtatgccggcgagaaggctgaagcc
atcgcatgccgcgagcatgaagtgatgcagttctggaaagagctgctgacgtcctgcgag
gagtgtcgagtacagattaccactgagacggacaagctgaggttcttcggcatggtccga
gatcagatcacgtggatggaatcgatcatctgtcagatagggacaggagagaagcccagg
gatgtgtcttcagtagaggtgctgatgaattatcaccatagtctgaagagcgaagtggag
gctcgcacccggagcaccctggactgtatcgagatgggcaaaactctgctggctgctaga
aacccagcagctgaagagatcaaggagaagctggacaaggtgattactaagcaatatgag
ctgtctgagaagtgggacaagcactgggaagtcctacagcaattgttggaggttcaccag
tttgctcaggaggctgtagtggcggaagcgtggctgaccgctcaggagccgctcatcagc
agcaacgagtttggcgcgagtgtagacgaggtggagcagctgattcgtcgacatgaagct
ttccgtaaagcagccgctacctgggaggagcgatttagctcactgcgacgactcaccacg
gtagaaaagttgaaagcagagcaaagtaaactacccccgacccctctgcttggtcgtaaa
gtcttcctggatccccaagatgccttacccagtgcgtccaccctcccccgtctcccgctc
tcgcctgtcatgagacagacaatctatgagcagaacgaagccaattctcctcagtcgccc
tcacctgccacgcctacaccctctccttcatctgtggctcgacggctggggtctacagtc
gctaactacacacctgtgatgaatggctccagctaccgcaacactctggaggcgcggcac
ggtggcgtagtgggtgtggctgcaggactaggccagcccgcacctttctcgatcgcctca
gttgccacggcggccatgctggtctcggccaaccaggtgcgagagagcaccagcacagcg
agagaccaagcgacaaaggtgatgagtcacctccagccagtacaggcggcgaggacactg
gatgtgaaatcgtccccatatctacggcaacccaaaatcaaacacatggatgatgcggtg
acgccactgatcgtggccagcaggctagagaaagcgagggagagggagagggggagggag
agagagttgatgatgggagagatagggacggaaagagcggaggtggctgtgatggccgag
gtggtgctccaggagccaggccgggagcgcctacatagcgaacccaccagagggcctcgg
gggtccaggactgacccgttgggccaggctgagcctcaggtccacacccacggccaccac
aggatagaacggcagctgtccagtgagcagctgatacaggcacgcagggacgagctgcct
caggaggtgtggagggaacaggccgagaggcgggagaagcggacgctggaaaggcaaacg
tccagcgagcaggagggcctcgggggccacgagggccggcggagagagagagaccgacac
cggctggagagacaggaatccagtgagcatgacaccgggaaagagcactctgacaaacgc
tcaggaggaggagaaaagagatccaccatggcagagattgtagagcagctgcaagaaaga
gaagcagcacaggcccgcggtgaggtgccccgcctacctaacggggtaccagagaagtct
ggcaaacaaacactcgacaggcctcgagctcgggacagaccaaaaccacgccgtcgacca
cgtcccaaagagcaaggagagactacacggcggtccaggtccgctccggcccagagcagc
ccgactgtcccccagcagccaacacacaccgcacaccacgagggcttccttttccgcaag
ctggacatcgagaccctgaagaaaagcaccaataggtcatgggtcaacctgtactgcgtg
ctgaacaaaggggagatgggtttctacaaggacgccaagaacaccaccacgtcctacaac
aacgagccgctgctcaacctctcccactgccactgcgacgtcaccaacggctacaagaag
aagaagaatgtcttcacgctcaaaactaaggacggcagtgagtttttatttcatgcaaaa
gatgaggacgacctcagagtgtgggtgaccaacatcaccgccagtattacggagtacgag
gagattgccaaatggggtcagccccaaccaactacctcatccaccgacgagggcacgcgg
cgcgacggcagcaaggcggacaacaggtcagagcgaggcggcgagcgctcggaccgggcg
gagcggatcgagcaggcagataaagaaaatgagaaagagagggagatagacaaggagaag
gagagagagaggggcgaacggtcggagaagtcagaacgcggcgggaagtcggaagcgaag
cgctcggaaaagtccggtaagaaaaagtga
DBGET
integrated database retrieval system
