Cottoperca gobio: 115017477
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Entry
115017477 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen34-like
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgob03016
]
115017477
Enzymes [BR:
cgob01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
115017477
Transfer RNA biogenesis [BR:
cgob03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
115017477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
SCAI
Motif
Other DBs
NCBI-GeneID:
115017477
NCBI-ProteinID:
XP_029301812
UniProt:
A0A6J2QX60
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All DBs
Position
13:complement(291049..298954)
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AA seq
276 aa
AA seq
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MEEDSPHVVGVSLCDTAPLLWRVEDLRAVRAQGLVGALLGALPRTPRQNTRLGRPLLLLP
EEEGLLTERHAAANRISVPADNQDGGGVELHQQEQQRSFEXQSVLALQDRKSALLRAMTS
PPGAVDEALRGRMESLDRNFTLPRSALAVQLSTARAGLSHCPDARTFLRADRPIRGQDEP
HGTTARYQVFRDLRGRGFYLTSAGKFGGDFLVYPGDPLRFHAHFIAVCLSLDEPVXMLDV
LAVSRLGSNVKKTVLLCSPRPDGGVVYTSLQWSGMV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggactcgcctcacgtggtaggggtcagtctgtgtgacacggctcccctgctg
tggcgagtggaggacctgcgggcagtgagggctcagggcctggtgggggcgctgcttggt
gcactgccccgaaccccccgacagaacacccggctgggccgcccgctgctgctgctgccg
gaggaggagggactgctgaccgagcgccatgctgctgctaatcgcattagcgtacctgct
gataaccaggatggagggggcgtggagctccaccagcaggagcagcagaggagttttgag
ngacagagtgtgctcgctctgcaggacaggaagtcagcgctgctccgcgccatgacgtcc
ccacctggggccgtagacgaggccctgcggggtcgcatggagtccctggaccggaacttt
accctccctcgctctgctctggcagtgcagctgagcacagcgagggcggggctgtctcac
tgtcccgatgcccgcaccttcctgcgggccgaccggccaatcagaggacaggatgagccg
cacggcaccaccgccaggtaccaggtgttcagagacctgagggggcggggcttctacctg
acctcggcggggaagttcggaggtgacttcctggtgtatccaggtgatcctctccggttc
catgctcacttcatcgcagtctgtctgtctctggacgagcctgtgntgatgctggacgtc
ctcgcagtgtctcgtctcggctccaacgtgaagaagaccgtcctgctctgctcgccgagg
ccagacgggggggtcgtgtacacctcgctgcagtggagcgggatggtgtag
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