KEGG   Cottoperca gobio: 115017538
Entry
115017538         CDS       T07513                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cgob  Cottoperca gobio
Pathway
cgob00565  Ether lipid metabolism
cgob01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    115017538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgob03036]
    115017538
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgob04147]
    115017538
Chromosome and associated proteins [BR:cgob03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    115017538
Exosome [BR:cgob04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115017538
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_DCAF4 LisH WD40_RFWD3 LisH_PAC1 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Nucleoporin_N Pox_A_type_inc Beta-prop_WDR11_2nd DUF2570 ARMC9_LisH LisH_2 SutA-RBD
Other DBs
NCBI-GeneID: 115017538
NCBI-ProteinID: XP_029301931
Ensembl: ENSCGOG00000010217
UniProt: A0A6J2QTM9
LinkDB
Position
13:9694795..9732789
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPITLKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKDCKAELREHEHVVECISWAPESAHPTIQEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGILFHPGGKFIVTCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagcggcaacgagatgaactaaatcgagcgatagccgattatctacgt
tccaatggatatgaagaagcgtattccactttcaagaaggaggcggaattagataataat
gaggaattggataagaagtacgctggccttttggaaaagaaatggacctcagtcatcaga
ttacaaaagaaggtgatggagcttgaatccaaactgaatgaagcaaaggaggagatcacc
ctgggtgggcccataactctaaagcgcgaccccaaagagtggatcccacgcccaccagaa
aggtacgcgctgagtggccaccgcagtccagtcacccgcgtcatcttccacccagtcttc
agtgtcatggtgtctgcttctgaggacgcaacaataaaggtttgggactacgagactgga
gactttgagcgcacactgaagggccacacggattcggtgcaggacatctcttttgaccag
accggcaaactgctagcatcctgctctgcagacatgactatcaagctgtgggatttccaa
ggctttgagtgcatcaggaccatgcatggacatgaccacaatgtttcgtctgtagccatc
atgcccaatggagatcacattgtttctgcctcaagggacaaaaccataaaaatgtgggag
gtggcaactggctactgtgtgaagaccttcacaggccacagggagtgggtccgcatggtg
cggcccaaccaagacggcacactgatcgccagctgctccaacgaccaaacggtgcgcgtg
tgggtcgtggcctccaaagactgcaaggctgagctgcgggagcacgaacatgtggtcgag
tgcatctcctgggcaccagagagcgcccaccccaccatccaagaggccacaggctccgag
accaagaagagtggtaagccgggtcccttcctgctgtctggctccagagacaaaaccatc
aagatgtgggatgttagcattggcatgtgccttatgacactggttggccatgacaactgg
gtgcgtggtatcctcttccaccctggaggcaagttcattgtgacctgtgcagatgataaa
accttaaggatctgggactacaagaacaagcgctgcatgaaaaccctgtgtgcccacgaa
cactttgttacctctctggatttccacaaggctgctccctacgtggtcactgggagtgta
gatcaaacagtaaaagtgtgggagtgccgctga

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