Cottoperca gobio: 115017598
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Entry
115017598 CDS
T07513
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cgob
Cottoperca gobio
Pathway
cgob04137
Mitophagy - animal
cgob04140
Autophagy - animal
cgob04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115017598
04137 Mitophagy - animal
115017598
04148 Efferocytosis
115017598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115017598
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115017598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
115017598
NCBI-ProteinID:
XP_029302067
Ensembl:
ENSCGOG00000001822
UniProt:
A0A6J2QXY5
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Position
13:complement(20577000..20598109)
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AA seq
630 aa
AA seq
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MGEKEETVALKRTSSEQKKLRSRDAARCRRSQETEVFYDLAHTLPLPRRVCTHLDKSTIM
RVALSFLRMHLLLRPAGENQREESKEEEEEEEEEEEEDPMDALYPQALAGFILVMSEEGD
MIYLTENVNRHVGITQLELLGQSIYDFVHPCDQEELRDLLTSRSGLQKKGLAEQPSERNF
FLRMKNTLTSRGRTVNIKSAVWKVLHCTGHIRQLSPPAGRVMTLLCEPVPHPSCVELPLD
TCTFLTRHSMDLRFTHCEGRVTELVGYKPEDLIGRSAYEFYHALDSDHVNKSLHTLLSKG
QVSTRHYRFLANSGGFVWAETQATVLYSSKTSQPEAVICLNFILSAVEQPDVVFSVEQVR
CGRLPEAEPHSPAVAPEDCGTSDISDSERLCSSSQSEDAGLNPSSAAELFFKVKEIVEEL
FQPSPEADGVIVPLTGDFVELSFSSLCGETSLPEHPQDLCTPQLRQLLSPIFSPITPPSS
SSPVSSPDFQLEVMDLDMLAPYISMDDDFQLTVFSSLPEEADKPPSEPSTVTGRRKRTHN
PDEEMLMIQDKRQKQEPSSIEEELLLLSCLEETNQSDLFLELAPAGRSQLLTDRDPILGA
IQGLCDTAAVMRDTSTPRPTDLSPPLSPMT
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgggggagaaagaggagaccgtcgcgctcaaacggaccagttcggagcagaagaagctg
cgttctcgtgatgcggccagatgtaggcggagtcaggagacagaggtgttttatgacctc
gcccacactctgccgctcccccgtagagtctgcacccacctggacaaatctaccatcatg
agagtggccctcagcttcctgcggatgcacctcctcctgcgacccgcaggtgagaatcag
agagaggagtctaaagaggaggaagaggaggaagaggaggaagaggaggaagatcctatg
gatgctctctatcctcaggccctggctggattcatcctggtgatgagtgaagagggagac
atgatctacctgacggagaacgtcaacagacacgtcggcatcacacagctggagctgctg
ggtcagagtatttatgactttgttcatccctgtgatcaggaggagctcagagacctgctg
acttcacgttcaggtctgcagaagaaagggttggcagaacagccgagtgagaggaacttc
ttcctgcgaatgaagaacacgctgaccagcagggggcgcactgtcaacatcaagtctgct
gtctggaaggtcctccactgcacaggtcacatccgtcagttgtcgccccctgcaggccga
gtgatgactctgctgtgtgaacctgtccctcacccgtcctgcgtggagctccctctggac
acctgcaccttcctcacccgccacagcatggacctgcgcttcacacactgcgagggcagg
gtgacagagttggtgggatacaaacctgaagatctgattggccgctcagcctatgagttt
tatcacgcgctcgactctgatcacgtcaacaagagcctgcacacgttgctgtccaaaggt
caggtgagcaccagacattaccgtttcctggccaacagcggcggctttgtctgggcggag
actcaggcgaccgtcctctacagcagcaagacgtcacagcccgaggccgtcatctgcctc
aacttcatactcagtgccgtggagcagccagacgtggttttctccgtggagcaggtccgc
tgtggccggctgcctgaagctgaaccacactcaccagcagttgcaccagaggattgtggg
acttctgacatcagcgacagtgagcgtctctgcagctccagtcagtctgaggacgccggt
ttgaatcccagcagcgctgcagagctcttcttcaaagtgaaggagattgtggaggagctt
ttccagccctctccggaggccgatggcgtcattgtcccgctgacaggagattttgttgag
ctgtcgttctccagtctctgcggtgaaacctcgctgccagagcaccctcaggacctgtgc
actccccagctgagacagctcctctcacccatcttcagccccatcactccaccttcctca
tcatcaccagtctcctcacctgattttcaactggaggtgatggatctggacatgttggct
ccgtatatctctatggacgatgacttccagctgacggtgttcagcagtttgccagaggaa
gccgacaaacctccgtctgaaccctcaaccgtcacaggccgcaggaaacggactcataac
ccagatgaggagatgctgatgattcaggacaagagacagaaacaagagccttcctcaata
gaagaggaacttcttctcctgagctgtctggaggaaaccaaccaatcagatttgttcctg
gagctggctcctgcagggcggagtcagctgctcacagacagagacccgattttaggagcc
atacagggactgtgtgatactgctgctgtgatgagggacacatccacacctcgtcccact
gacctgtcgccgccgctctcgcctatgacttga
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