Cottoperca gobio: 115017798
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Entry
115017798 CDS
T07513
Symbol
samd4b
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115017798 (samd4b)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115017798 (samd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
SAM_1
PHAT
Vts1
SAM_2
Motif
Other DBs
NCBI-GeneID:
115017798
NCBI-ProteinID:
XP_029302352
Ensembl:
ENSCGOG00000021342
UniProt:
A0A6J2QYS7
LinkDB
All DBs
Position
13:complement(14291999..14305255)
Genome browser
AA seq
667 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIQILEA
EANNAAIVSQWHQEPKEKVVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYAPRAPSSPYHPHQSSDEWPSSA
EALDPGHAWHDQSPSSSTSSAGQNGHMSFPGLGGQMQPSPLKKSMSVIPSSSQACGSEWV
CQDDIGGRQNFILTDHAPLSPQSSVASSGSEQTEEQGSARNTFQEDGSGMKDVPAWLKSL
RLHKYASLFSQMTYEEMMILTEHHLESQNVTKGARHKIALSIQKLRERQIVLKSLEKDIL
EGGNLRNALQELQLIITTPIKAYSPPSAAQTALDAALALDTATSPSEATKTGADKESASE
GFQSHNPPPCDGDSSATPISDGDIAGQFTRVMGKVCTQLLVSRPDEENISCYLQLIEKCL
THEAFTETHKKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWTYGSNSLPTAGSVSGVV
GRRGQRQFQMTPRGLTAGRIGLLSPGGIGGASPRHTLTNPALAGQGRQNLWFANPGGSNS
MPSQSRSSVQRTHSLPVHTSPQTMLMFQQQECQVPGADLEINPTLESLCLSMTEHALGDG
TDRTSTI
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagatcaagtaggtatcctcacagattggttcaagggctggaatgagtgt
gaacagacggtggcactgttgtccctcctgaagagggtgtcccgcacccaggctcgcttc
ttacacatctgccttgaacactggctggcagactgcacagagatccaaatcctagaagct
gaggccaataatgcagcaattgtcagccagtggcatcaggagccaaaggaaaaggttgtg
tccttgctgctgtcccatctgcctctgctgcagccacgcaacagcgaggccaaatgtgag
tacatgaagctgctgcagaaggtgttgagtcacactattgagagtagcctgtttgtggaa
gaaagcaggcagctgctgtcctacgcgctcatccaccctgccaccacacttgacgaccgc
acctctctggccatgtggctaaaccacctggaggagcacctatccagcggctacgctccc
cgggccccatctagcccctaccacccgcaccagagctcagatgaatggcccagctcggct
gaggctctggatcccggacacgcctggcacgaccagtccccctcatccagcacgtcttca
gcaggccagaacggacacatgtctttcccaggtctgggtgggcagatgcagcccagccct
ctgaagaagtccatgtccgttattccttccagttcccaggcttgtggctctgagtgggtt
tgccaggatgacataggtggccggcagaacttcattctaacagaccacgcacccctttca
ccccaaagcagcgtagcctcttctggcagtgagcagacagaagaacaaggctccgctcgc
aacaccttccaagaggatggcagtggcatgaaagatgttccagcttggttgaagagtctc
cgccttcataaatatgcatcacttttctcccaaatgacctatgaggagatgatgattctc
acagaacaccacctggagtcgcagaacgtcactaaaggagcacggcataagatcgccttg
agtatccagaaactgcgagagaggcagattgtgctcaagtctttagaaaaggatattttg
gaagggggaaacctgcgaaatgccctccaggagctgcaactgatcatcaccacacccatc
aaggcctacagcccacccagtgcagcacagactgccctggacgcagcattggccttggac
acagccacctccccttcagaagccacaaaaacaggagcagacaaagagtcggcctcagag
ggcttccagtcccacaatccacctccctgtgatggagactcctcagccacacccatctca
gacggcgacattgctggacagttcacccgtgtcatgggtaaagtgtgcacccagctgctg
gtgtcgaggccagatgaggagaatatcagctgttaccttcagctcattgagaagtgtctg
actcatgaggcttttacagaaactcacaaaaaaaggctggtctcctggaagcagcaggtc
ctcaaactgcttcgcctgttccctcggaaagctatgctggacatgcctgtgtaccgacag
aaaggctggacctatgggtcaaactccctccccacagcaggctctgtgagtggagttgta
gggcggagaggacaaaggcagttccagatgactcctcgtggactcacagccggacgcatc
ggtcttctgagtcccggcgggatcgggggagcatctcctcgccacacactcactaatcct
gcgctggcaggccagggaagacaaaacctgtggtttgccaaccctgggggcagtaacagc
atgccaagtcagagtcgcagctctgtgcagcggacacactcactccctgtccacacgtcc
ccacaaaccatgctcatgttccagcagcaagaatgccaagttccaggtgctgacctggag
atcaaccccacgctggagtcactgtgcctcagtatgacggagcatgccttaggggatgga
acagaccggacatcaacaatatga
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