Cottoperca gobio: 115017855
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Entry
115017855 CDS
T07513
Symbol
brip1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03440
Homologous recombination
cgob03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115017855 (brip1)
03460 Fanconi anemia pathway
115017855 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115017855 (brip1)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115017855 (brip1)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
115017855 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
115017855 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
DEAD
HBB
EccD
Motif
Other DBs
NCBI-GeneID:
115017855
NCBI-ProteinID:
XP_029302427
UniProt:
A0A6J2QZ06
LinkDB
All DBs
Position
13:complement(23002724..23042132)
Genome browser
AA seq
1069 aa
AA seq
DB search
MASSLVEYTIGGVKIHFPCKAYPSQLAMMNSIIRGLNYGQHCLLESPTGSGKSLALLCST
LGWHQTQFAKLQDGGSLVKDKSQSDKNCGDCKKSDVTTPCQCVCHSKASRTTAITATPDV
VVLTESPCKDTAQPLPPAPEHVPLPEESQPNKQSIASRLSEKIKSSLSSDREKEDDFQPD
RKRIRTNEHKSRKRQRLEQGVIFIDDELECENDPSGPQSWTTEPNSQAAGLSSSCCPPEP
CSRCPCALTKDGVKDKVKDGKKKIPKIFFGTRTHKQITQIAHELKRTVYSSVPMTILSSR
GHSCVHPEVAPHSNRNERCKDLLDTKDGKSCRYYHGVQRMRDQCTLQRVHGLHEAWDVED
LVALGKRLRSCSYYAARELMQEASIIFCPYNYLLDPMIRESMEIDLTGQIVVLDEAHNIE
DCARESASFTLDHNSLLMSRDELDSMVNNNIRRSQHEQLRNFCYSLINWIQESQSLMSER
GYESSCKVWNGKDVLDIFHNLGITAGTFSLLKQCLAAVLEKEERVGVVNGKEDMVQVPTI
SSATSTVLKNLFMVLGFMYSSEDNCRFAEDYRIALQKSYGWTNKVPPDVPDGQGFFVRPR
HRQRQSVRVKTEVLTLSFWCLNPAVTFSDLRKSVHCIVLTSGTLSPMGSFSSELGVNFSI
QLEANHVINKSQVWVGTVGSGPQGKKLLATFQHTETYAFQDEVGALLLHICQVVAKGVLC
FLPSYKVQEIRLDGGGYEAKRVGRASLQQTETRSSXRTTDEARADHELKMMPVGLKIRPS
RAKPVRGCSSKKDIVQANAYQAHFFPEVQDDGCITCQHTELILKPSVNDTESRKSSVDVT
ECKALKKVSSTPGSSTRTEFLLVTPKQEDTGEIVAAGCSPTTPALDGPGSLHFFNKAIKV
QRSCKQKRRRFNKTSPKIKRVKDLKPCSLGLYCSVCEKELLPVAHGALRRAXCESEHLGF
LRNDRFRTTSRRCQCATHQPSISDNSGSLLVVQSVTSLKALRTALQPYCDELSDAYNAIW
NPKEGSVSRFLQCKGCLSLSPVLSAALIAAEIQCPLDMAQDQISVNTPI
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatccttagtagagtataccattggaggggtgaagatccacttcccctgcaag
gcgtacccatcccagttggccatgatgaattcaatcatacgagggctgaactatggacag
cactgtttgctggagagtccgacaggaagtggaaagagcttggctttgctctgctcgacc
cttggctggcatcagactcagtttgctaaactacaagacggaggaagccttgtgaaagac
aagagccagtcagataaaaactgtggtgattgtaagaagtcagatgtcacgaccccctgt
cagtgtgtgtgccacagcaaagccagcaggaccacagctataactgccacacctgacgtg
gtggtcctcactgagtcaccctgcaaagacacggcacagccgctgcctccagcacctgaa
catgtgccattaccagaggagtcgcagcccaataaacagtctatagcctctcgtctgtct
gagaagatcaagtcttccctcagctctgaccgtgagaaggaagacgacttccagcctgat
aggaaacgcattcgcactaacgaacacaagagccgtaaaaggcagcgtctggagcaggga
gtgatattcatagatgatgagctggagtgtgaaaatgatccttcaggtcctcagagttgg
accacagagccaaacagccaagcagctggtttgtcttcatcatgctgcccccctgaaccc
tgctcccggtgcccgtgtgcattaaccaaagatggtgtcaaggacaaagtcaaagatggc
aaaaagaagattcccaagatcttctttggcactcgaactcataaacagataactcagatc
gcccacgagctgaagcgcactgtttactccagtgtgcccatgaccatcttatccagtaga
gggcacagttgtgtccacccagaggtggcgcctcactccaaccgcaacgaacgctgcaag
gatctactggataccaaagatggcaagtcatgccgctactaccatggtgtccagaggatg
cgggaccagtgcacactacagcgggtccacggactccatgaagcctgggacgttgaggac
cttgtcgcactgggtaaacggctccggtcgtgctcctactatgctgcccgtgaacttatg
caggaggcctccatcatcttctgtccatataactacctgctggacccaatgatcagagag
agtatggagatcgacctaacaggtcagattgtggtgctggacgaggcccacaacattgag
gactgtgctagagagagtgccagcttcactttagaccacaacagtctgctgatgtccagg
gacgagcttgacagcatggtcaacaacaacatcagacgctcccaacacgagcaactcagg
aacttctgctatagcctgatcaactggatccaggagagccaaagcctgatgtctgaacgg
ggatatgagagctcctgtaaagtctggaatgggaaggatgtactggacatctttcacaac
ctgggcatcactgctggcacctttagccttctgaagcaatgtttggcagcagtgttggag
aaagaggagcgtgttggtgtggtcaacggtaaagaggatatggttcaggttccaacaatc
agctcagctacctccactgttctcaaaaacctcttcatggtgctgggcttcatgtactcc
tctgaggacaactgcaggtttgctgaagactaccggatagctctgcagaagagctatggt
tggacgaacaaggtcccacctgatgtccccgatggacagggcttttttgttcggccacgc
cacagacaacgccagagcgtccgagtcaagacagaagtccttacactcagcttctggtgc
ctcaaccctgctgtgacgttctctgacttgagaaagtcggtgcactgcattgtgctgaca
tcaggaaccctgtcacccatgggctccttctcctctgaacttggagtgaatttctccatc
cagctggaggccaaccatgttatcaacaagtcccaggtatgggtgggcactgttggttca
ggaccccaaggcaaaaaactcttagccaccttccaacatactgaaacgtatgccttccag
gacgaggtgggtgcgctgctgctccatatttgccaggtcgtggccaagggtgtgctctgc
ttcttgccctcttacaaggtgcaggagatcaggttagatggtggaggctatgaagccaag
cgtgtagggagagccagtcttcagcagactgagacccggagcagctagaggacgactgac
gaggccagggcagatcatgagttaaagatgatgcccgtgggtttgaagatcagaccgtcc
agagccaaacctgtcagaggatgcagctcaaaaaaagacatagttcaagcgaatgcttat
caggctcatttcttcccagaggttcaggatgatggctgcattacctgccaacacacagaa
ctcatcttgaaaccaagtgtaaatgacactgagtccagaaagtcctctgtggatgtgact
gagtgcaaagctcttaaaaaagtgtcgagcacacctggtagttccacaaggactgagttt
ctccttgtcactcccaaacaagaagacacaggagaaattgtagcagcaggatgtagtcct
actactccagcactggatggtccaggaagtttacattttttcaacaaagctataaaagta
caaagatcttgcaagcagaagcgcaggagatttaacaagacctctcctaaaataaagaga
gtcaaagacctcaagccttgctctttgggactctactgttctgtgtgtgagaaggaacta
cttcctgtagcacatggtgcactacgacgtgctngttgtgaatctgaacatctaggtttt
ctgagaaacgacagatttagaacaacttcccgccgctgccagtgtgcaacacatcagcca
tcaatttcagacaactcgggctcactgctggtagtccaaagtgtcacgtctctgaaggcc
ctgaggaccgctctgcagccatactgtgatgagttatcagacgcatataatgccatctgg
aatcctaaagagggctctgtgagcagatttctgcagtgcaaaggctgtttgtcactaagc
cccgttctgtctgcagctttaattgcagcagagatccagtgccctctagacatggctcaa
gatcagatttcagtgaatactcccatctga
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