KEGG   Cottoperca gobio: 115018087
Entry
115018087         CDS       T07513                                 
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
  KO
K24318  scavenger receptor class F member 1
Organism
cgob  Cottoperca gobio
Pathway
cgob04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    115018087 (scarf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgob04131]
    115018087 (scarf1)
Membrane trafficking [BR:cgob04131]
 Endocytosis
  Phagocytosis
   Scavenger receptors
    115018087 (scarf1)
SSDB
Motif
Pfam: EGF_laminin EGF_TEN EGF_2
Other DBs
NCBI-GeneID: 115018087
NCBI-ProteinID: XP_029302761
Ensembl: ENSCGOG00000007316
UniProt: A0A6J2QY87
LinkDB
Position
13:complement(9586117..9594312)
AA seq 917 aa
MKLLLRALSALLCCSLSSSQTLDPAGSNVCHNIRDPSTLVCCTGWRQEGKECTIPVCEAE
QACLKDEICVYPGVCRCPPGYYGAHCKTRCPAEFWAPDCRKVCQCHPHGRCHPVTGECTC
NSNRWGPLCQYACKCGRHGHCNPVHGNCTCDEGWWTPTCSKLCQCVSGGSAGPGCDQLTG
RCRCHRGHWGLKCPIACNCYMSACNQRTGVCECEAGWWSSSCDRRCNCDFTHSSCDPANG
ECVCHPGYQGVFCNQPCEAGKYGSGCTMSCGYCKDNQICSDTDGACDACQSGWNGTRCDR
PCPAGSYGAGCQEECPRCRNKEPCDPKTGNCWRCDPGWIGPRCEEACTNRTFGDACSFLC
SPCFHGNCHHVTGRCVCQPGFQAESCNSSCPALQFGLNCSSACDCGEGGGCDPVTGVCPN
SGRAAVIAGVLVPLLLLLLAVLCCCLCCGGGPVDGKDRATLADGGLSVRMKYHVYSVLAN
IGAALPCISDWSYGLPRVTVSHHDPELTFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYC
VPPREDILAVAGGEFHEMSSKCNMFLDPSGFSSEDITSPFNIPRTSSIAKSKRPSVSFAE
GTRFSPKERRGSAQDPAALPGHPRNKPKSPWGVLMLSALQSQGSAARTGEEDAAEGDEGE
YEVDMQATDNQETNSESGDQEDDRTPARATLQVPGASGRRRTMSNTAAHKVNQLPTSASD
AQVGLLNKVTTVYVTVGKAGRPVSKTETSSDGPVQAMLRRIGSLQRQREQESGRPKPKGA
EAIIKPPRRKLGARASVWEEGGPPAGEVGICKPIRRKHASINTSDTAGASDTSSESGTPK
RPLSSILKSVPEVASADSGSELRAEGGDPTTGKTEVTYLTVGPAGDAVSLTEVIANEGAV
VSVNDEPCYENIMIKHS
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgaagcttctcctcagagctctgagtgctctgctctgctgctcgctgtcctcctcacaa
acactggatcctgctgggagcaacgtctgccacaatatcagggacccctccaccctggtc
tgttgcactggatggcgtcaagaagggaaagagtgcaccatacctgtgtgtgaggctgag
caggcctgtctgaaggatgagatctgtgtgtatccaggagtgtgtcgctgcccacctggc
tactacggagctcactgtaaaacacgctgtcctgctgagttctgggctccagactgtcgc
aaggtgtgtcagtgccacccacacggccgctgtcaccctgtcaccggtgagtgcacctgc
aactccaaccgctggggtccactgtgccagtatgcctgcaagtgcggccggcacggccac
tgcaacccagtccacggaaactgcacctgcgatgagggatggtggacaccaacctgctcc
aagctgtgtcagtgcgtcagcggggggtctgcgggccccggctgcgaccagctaacaggc
cgctgtcggtgccacaggggccactgggggctgaaatgtcccatcgcttgcaactgctac
atgtcggcatgtaatcagcgtaccggtgtgtgtgagtgcgaggcaggctggtggtcatcc
agctgtgaccggcgatgtaactgtgacttcacgcacagcagctgtgacccggccaatggg
gagtgcgtgtgccacccggggtaccagggtgtcttctgcaaccagccctgtgaagctggg
aaatacggcagtggttgtacaatgagttgtggttactgtaaagacaaccagatctgctct
gacactgatggcgcctgtgatgcctgtcagtccggctggaacgggacacgatgcgaccgc
ccgtgcccggccggttcttatggcgccggctgccaggaggagtgtccacgttgcaggaac
aaagaaccctgtgacccaaaaactgggaactgttggaggtgtgaccctgggtggattggt
cccaggtgtgaggaggcctgcactaacaggacgtttggagacgcctgcagcttcctgtgt
agcccttgtttccatggtaactgccatcacgtgacaggaagatgtgtctgtcagccaggc
tttcaggcagagagctgtaacagcagctgccccgccctgcagttcggcctcaattgttcc
tccgcctgcgactgtggtgaggggggcggctgcgaccccgtcactggtgtctgccccaac
agtggcagagctgcagttatagcaggtgtgctggtacctttgctcctgttgctcctcgct
gtgctctgctgctgtttgtgttgtgggggaggtcctgttgatggcaaagacagggcgact
ttggctgatggaggcttgtcagttcggatgaaatatcacgtctacagtgtcctggcgaac
atcggtgctgccctcccctgtatttctgactggtcctatggcctgccccgtgtcaccgtg
tctcaccatgacccagagctgacgttcaaccacagcttcattgagcctccttcctctggc
tgggtgactgaggggtcgtccttcgacagtgatgaggaggagggagaggcgctctactgt
gtccctccgagagaagacatcctggcggtggcgggcggcgagttccacgagatgagctca
aagtgtaacatgttcttagacccgtccggcttcagcagtgaggacatcacctcgcccttc
aacatccctcgcacctccagcatcgccaagtccaagaggccctcagtctcttttgcagag
ggcacccgcttcagccccaaggagaggcgtggctcggctcaggaccccgccgctctcccc
ggacacccacgcaacaaacctaagtcaccctggggtgttttgatgctgtctgccctccaa
agtcagggaagtgcggctagaactggggaggaagatgcagctgaaggtgatgagggggaa
tatgaagtggatatgcaggcgacggacaatcaggaaacaaactctgagtcgggggaccag
gaagacgacagaacccccgcccgtgccaccctgcaggtccctggggcatcaggacgaagg
cggactatgtccaacacagctgctcataaagtgaaccagctgccaacatctgcctcagat
gctcaggttgggctcttaaataaggtcaccacggtgtatgtgacggtgggtaaggcaggt
aggcccgtgtcgaagacggagacgagctctgatggccccgttcaggccatgctgcggcga
atcggcagcctccagagacaaagggagcaggagtctggcaggccgaagcccaaaggagct
gaagcgattatcaaaccccccaggaggaagctcggcgctcgggcgagtgtgtgggaggag
ggcgggccgcctgcaggggaggtcggcatatgtaagccaatcaggagaaagcatgcttct
attaacacctctgacacagctggtgctagtgacacatcatcagagagcggcactcctaaa
aggcctctgtcgtccattttgaagagcgtgccagaggtggcttcggctgactcagggtca
gagctgagggctgagggtggcgaccccactacaggaaaaactgaggtcacctacctgacc
gtgggaccagcaggagacgctgtgagtctcactgaggtcatcgccaacgaaggtgcagtg
gtcagtgtgaacgatgaaccctgctatgaaaacatcatgattaaacactcataa

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