Cottoperca gobio: 115018087
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Entry
115018087 CDS
T07513
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
cgob
Cottoperca gobio
Pathway
cgob04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115018087 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115018087 (scarf1)
Membrane trafficking [BR:
cgob04131
]
Endocytosis
Phagocytosis
Scavenger receptors
115018087 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
115018087
NCBI-ProteinID:
XP_029302761
Ensembl:
ENSCGOG00000007316
UniProt:
A0A6J2QY87
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Position
13:complement(9586117..9594312)
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AA seq
917 aa
AA seq
DB search
MKLLLRALSALLCCSLSSSQTLDPAGSNVCHNIRDPSTLVCCTGWRQEGKECTIPVCEAE
QACLKDEICVYPGVCRCPPGYYGAHCKTRCPAEFWAPDCRKVCQCHPHGRCHPVTGECTC
NSNRWGPLCQYACKCGRHGHCNPVHGNCTCDEGWWTPTCSKLCQCVSGGSAGPGCDQLTG
RCRCHRGHWGLKCPIACNCYMSACNQRTGVCECEAGWWSSSCDRRCNCDFTHSSCDPANG
ECVCHPGYQGVFCNQPCEAGKYGSGCTMSCGYCKDNQICSDTDGACDACQSGWNGTRCDR
PCPAGSYGAGCQEECPRCRNKEPCDPKTGNCWRCDPGWIGPRCEEACTNRTFGDACSFLC
SPCFHGNCHHVTGRCVCQPGFQAESCNSSCPALQFGLNCSSACDCGEGGGCDPVTGVCPN
SGRAAVIAGVLVPLLLLLLAVLCCCLCCGGGPVDGKDRATLADGGLSVRMKYHVYSVLAN
IGAALPCISDWSYGLPRVTVSHHDPELTFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYC
VPPREDILAVAGGEFHEMSSKCNMFLDPSGFSSEDITSPFNIPRTSSIAKSKRPSVSFAE
GTRFSPKERRGSAQDPAALPGHPRNKPKSPWGVLMLSALQSQGSAARTGEEDAAEGDEGE
YEVDMQATDNQETNSESGDQEDDRTPARATLQVPGASGRRRTMSNTAAHKVNQLPTSASD
AQVGLLNKVTTVYVTVGKAGRPVSKTETSSDGPVQAMLRRIGSLQRQREQESGRPKPKGA
EAIIKPPRRKLGARASVWEEGGPPAGEVGICKPIRRKHASINTSDTAGASDTSSESGTPK
RPLSSILKSVPEVASADSGSELRAEGGDPTTGKTEVTYLTVGPAGDAVSLTEVIANEGAV
VSVNDEPCYENIMIKHS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttctcctcagagctctgagtgctctgctctgctgctcgctgtcctcctcacaa
acactggatcctgctgggagcaacgtctgccacaatatcagggacccctccaccctggtc
tgttgcactggatggcgtcaagaagggaaagagtgcaccatacctgtgtgtgaggctgag
caggcctgtctgaaggatgagatctgtgtgtatccaggagtgtgtcgctgcccacctggc
tactacggagctcactgtaaaacacgctgtcctgctgagttctgggctccagactgtcgc
aaggtgtgtcagtgccacccacacggccgctgtcaccctgtcaccggtgagtgcacctgc
aactccaaccgctggggtccactgtgccagtatgcctgcaagtgcggccggcacggccac
tgcaacccagtccacggaaactgcacctgcgatgagggatggtggacaccaacctgctcc
aagctgtgtcagtgcgtcagcggggggtctgcgggccccggctgcgaccagctaacaggc
cgctgtcggtgccacaggggccactgggggctgaaatgtcccatcgcttgcaactgctac
atgtcggcatgtaatcagcgtaccggtgtgtgtgagtgcgaggcaggctggtggtcatcc
agctgtgaccggcgatgtaactgtgacttcacgcacagcagctgtgacccggccaatggg
gagtgcgtgtgccacccggggtaccagggtgtcttctgcaaccagccctgtgaagctggg
aaatacggcagtggttgtacaatgagttgtggttactgtaaagacaaccagatctgctct
gacactgatggcgcctgtgatgcctgtcagtccggctggaacgggacacgatgcgaccgc
ccgtgcccggccggttcttatggcgccggctgccaggaggagtgtccacgttgcaggaac
aaagaaccctgtgacccaaaaactgggaactgttggaggtgtgaccctgggtggattggt
cccaggtgtgaggaggcctgcactaacaggacgtttggagacgcctgcagcttcctgtgt
agcccttgtttccatggtaactgccatcacgtgacaggaagatgtgtctgtcagccaggc
tttcaggcagagagctgtaacagcagctgccccgccctgcagttcggcctcaattgttcc
tccgcctgcgactgtggtgaggggggcggctgcgaccccgtcactggtgtctgccccaac
agtggcagagctgcagttatagcaggtgtgctggtacctttgctcctgttgctcctcgct
gtgctctgctgctgtttgtgttgtgggggaggtcctgttgatggcaaagacagggcgact
ttggctgatggaggcttgtcagttcggatgaaatatcacgtctacagtgtcctggcgaac
atcggtgctgccctcccctgtatttctgactggtcctatggcctgccccgtgtcaccgtg
tctcaccatgacccagagctgacgttcaaccacagcttcattgagcctccttcctctggc
tgggtgactgaggggtcgtccttcgacagtgatgaggaggagggagaggcgctctactgt
gtccctccgagagaagacatcctggcggtggcgggcggcgagttccacgagatgagctca
aagtgtaacatgttcttagacccgtccggcttcagcagtgaggacatcacctcgcccttc
aacatccctcgcacctccagcatcgccaagtccaagaggccctcagtctcttttgcagag
ggcacccgcttcagccccaaggagaggcgtggctcggctcaggaccccgccgctctcccc
ggacacccacgcaacaaacctaagtcaccctggggtgttttgatgctgtctgccctccaa
agtcagggaagtgcggctagaactggggaggaagatgcagctgaaggtgatgagggggaa
tatgaagtggatatgcaggcgacggacaatcaggaaacaaactctgagtcgggggaccag
gaagacgacagaacccccgcccgtgccaccctgcaggtccctggggcatcaggacgaagg
cggactatgtccaacacagctgctcataaagtgaaccagctgccaacatctgcctcagat
gctcaggttgggctcttaaataaggtcaccacggtgtatgtgacggtgggtaaggcaggt
aggcccgtgtcgaagacggagacgagctctgatggccccgttcaggccatgctgcggcga
atcggcagcctccagagacaaagggagcaggagtctggcaggccgaagcccaaaggagct
gaagcgattatcaaaccccccaggaggaagctcggcgctcgggcgagtgtgtgggaggag
ggcgggccgcctgcaggggaggtcggcatatgtaagccaatcaggagaaagcatgcttct
attaacacctctgacacagctggtgctagtgacacatcatcagagagcggcactcctaaa
aggcctctgtcgtccattttgaagagcgtgccagaggtggcttcggctgactcagggtca
gagctgagggctgagggtggcgaccccactacaggaaaaactgaggtcacctacctgacc
gtgggaccagcaggagacgctgtgagtctcactgaggtcatcgccaacgaaggtgcagtg
gtcagtgtgaacgatgaaccctgctatgaaaacatcatgattaaacactcataa
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