Cottoperca gobio: 115018306
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Entry
115018306 CDS
T07513
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cgob
Cottoperca gobio
Pathway
cgob03030
DNA replication
cgob03420
Nucleotide excision repair
cgob03430
Mismatch repair
cgob03440
Homologous recombination
cgob03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115018306 (rpa1)
03420 Nucleotide excision repair
115018306 (rpa1)
03430 Mismatch repair
115018306 (rpa1)
03440 Homologous recombination
115018306 (rpa1)
03460 Fanconi anemia pathway
115018306 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115018306 (rpa1)
03032 DNA replication proteins [BR:
cgob03032
]
115018306 (rpa1)
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115018306 (rpa1)
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115018306 (rpa1)
DNA replication proteins [BR:
cgob03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
115018306 (rpa1)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
115018306 (rpa1)
MMR (mismatch excision repair)
115018306 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
115018306 (rpa1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF8448
DUF223
RADX_3rd
DUF8512
Motif
Other DBs
NCBI-GeneID:
115018306
NCBI-ProteinID:
XP_029303122
Ensembl:
ENSCGOG00000023202
UniProt:
A0A6J2R128
LinkDB
All DBs
Position
13
Genome browser
AA seq
599 aa
AA seq
DB search
MTKLSEGAIEALSNSTGGNDAVLQLVNIRKIDGGNGPARYRVMMSDGVHTLSSFMLSTQL
NFMVEDNLLAPNCVCILKRHVTNILKDKRRVVIILEIEVVKPAEDVAGRIGDPTPYTEGQ
NKAPQSATNSENRQPLQQQHKSEVNRGFNKDFGKKTPSAMPSTPGGSSKVVPIASLNPYQ
SKWTIRARITNKSSIRTWSNSRGDGKLFSTEMVDESGEIRVTGFNQEVDKFFSLIEVGKV
YYISKGSLKIANKQYTSVKNDYEMTLNGDSTIIPCEDSSDVPMVQCDFVSIADLENREKD
AIVDVIGVCKSVDEVTRLTTKANREVSKRTLHLMDMSGKLVTVTLWGEDAEKFEGSGQPI
VAVKGAKLSDFGGRSLSASFSSTVMINPDIPEAYKLRGWYDKEGHAMDGQSLTEMKGGGG
GNTNWKTLADVKTEHLGHGDKADYYTCIATIVYLRKENCLYQACPSQDCNKKVVDQHNGM
FRCEKCDKEFPNFKYRLILSANIADYADNQWVTCFQESAESILGQNAAYLGQLKDSNEAA
FDEIFQQANFHTFVFRSRVKLETYNDESRIKATVMDVKPVDHMEYSKRLIMNIRKLAAE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctctcagagggtgcgatagaggctctatcaaacagcaccggtggcaacgac
gcagtccttcagttggtgaacattcgcaaaattgatggaggaaacggtccagctcgctat
cgtgtgatgatgagtgatggagtgcacactctgtcctcctttatgctctcgacgcagctg
aacttcatggtcgaggacaatttactggccccgaactgcgtctgcattctgaagaggcat
gtgaccaatatactcaaggataaaagacgagtagtgatcattttggaaattgaggtcgtc
aagcctgctgaagatgttgctggaagaataggtgaccctactccttacactgagggtcaa
aacaaagcaccgcagtcggcgacaaactctgaaaaccgccaaccgctacagcagcaacat
aaaagtgaagtgaacagaggtttcaataaagactttggtaaaaagactccatctgctatg
cccagtactccagggggtagctctaaagttgtgcccatcgccagcctcaacccctatcag
tccaagtggaccatccgcgcccgtataaccaacaagagcagcatccgtacatggagcaac
tctcgtggtgatggcaaactcttctccacggagatggtggatgagagtggagagattcga
gtgactggtttcaaccaagaggtggacaagttcttcagccttattgaagttggaaaggtc
tactacatctccaagggctccctgaagatcgccaacaagcagtacacatcagtgaagaac
gactatgagatgactctcaatggagactccaccatcatcccctgtgaagacagctctgat
gttcccatggtgcagtgtgactttgtctctatcgcagacctggagaacagagagaaagac
gccattgttgatgtgattggcgtgtgtaagagtgtggacgaagtgacccgcctcaccacc
aaggccaacagagaagtgtccaagaggacgctccacctaatggacatgtctgggaagctg
gtgactgtcacgctgtggggagaggacgcagagaagtttgaaggctctggacagcccatc
gtagccgttaagggggcgaagctttcagactttggaggacggtccctctctgcatccttc
agcagcactgtgatgatcaaccccgacatcccggaggcatacaagctcagaggctggtat
gacaaggagggtcatgccatggatggacagtctctgacggagatgaaaggcggtggggga
ggaaacaccaactggaagactctggccgacgtgaagacggagcacctggggcatggagac
aaggcagactactacacctgcattgctaccattgtgtacctgcgcaaggaaaactgcctt
taccaggcttgtcctagccaagactgcaacaaaaaagtggtagaccaacacaacggcatg
ttccgctgtgagaagtgtgacaaagagttccccaacttcaagtaccgcctcatcctttct
gccaacattgcggattacgcggacaaccagtgggtgacttgcttccaggagagtgcagag
tccatcctgggccagaatgcagcttacctcgggcagctcaaggactctaacgaagctgcc
tttgacgagatcttccaacaagccaacttccacacttttgtcttccgcagcagagtgaag
ctagaaacgtataacgatgagtccaggatcaaggctacagtgatggatgtgaagcccgtc
gaccatatggaatacagcaagaggttgatcatgaacataaggaaactggctgctgagtag
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integrated database retrieval system
