Cottoperca gobio: 115018503
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Entry
115018503 CDS
T07513
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
cgob
Cottoperca gobio
Pathway
cgob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115018503 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115018503 (uimc1)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
115018503 (uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
Motif
Other DBs
NCBI-GeneID:
115018503
NCBI-ProteinID:
XP_029303343
Ensembl:
ENSCGOG00000017675
UniProt:
A0A6J2QXQ3
LinkDB
All DBs
Position
14:complement(21487683..21499088)
Genome browser
AA seq
1064 aa
AA seq
DB search
MRGRRGHSPSSSSSSSACFVSLLVNVSQEQTSMALRKQILKDAGDIPSGSQRIDLNTQED
EALDDNEELLSSSSSSSSSSSRSREKRKREKESKSKPNEMTEEEMMDLALRLSEQEASVT
ALRLQQEEEAMMKAIQESIVSQTQPCPPSQSPSPLNDAEASLRLCSRRKLLYSNRKFACA
VSQGASEDVCTPETDLNRADESNDGSKKRKRKEGSPLLEMPDLSQTQKISCQASPCSSDC
VSAPLDSPQSSDSTLIDECQLHKSPVFPSTGCRAEVHVPRLSQDLLQTCRTSGFVLCSQE
SLTSTLKSPPAQPKSPTFPKSLKYSNNFTLSRSPVFSETDRGDNGAGLTERSPEYFKSPV
FGRNTQHETSASACKPKVSSSGFMFSSQESLTPSVRSTSCRSKSPVFPKSPGLSTNPPSP
ERSATCKSPVFPEADGGQTEQSRGCCTSPVIGRTGGRQKVDVDVQNHSESPSAAELRGSD
GEGNPTTTRDPSQSLRQDRGTDHTASASDDAEELNEISKNGNSAETAPTSNMVLVWSEED
DDVTPVGSPSPVFPEEKPLHQADSEAASLNHVTAASPGVNCRPSTSSTSTGRLQLPTTEQ
EPRPISSQGTDSRASAPPRDPAGGPTVHYYWGVPFCPRGLDPDKYTQVIMAQMEVYEKSL
KQAQRCLLRKAEWGEAVLPQLEKSPSPESRAESPQQLVPRRRGLRLKGKKLCEEADSCPA
EEEDEKEDEEERVSKEEEEKKERGGEEGHVDTDDDCEVCPETQLSAIDDDRTQDLMLPTN
TGAESDCKMSREQPEVEMILRVDSPSEAELQDDEEEMEVEADVDRKAKRSVPVISSDVGG
QHVTKEDVEEIKDRGLQRSTSPELEAAAGPQSSDTKVDCPICQGSFPVTQIERHAAYCDG
EVDDRRPEKDCFQVSLKPRKKRTRTAEASAEETNKPSNTGKNQEKCYICQKAVPLRDYSR
HTELCIQRQASKTAAKGNLLSALQQTESRDSEAGPSGSKLQLGEVIDLRDDDDEDDDEEE
GGSVSLLRISNSPIRSFTPISEATGCLIDFKKQHRAKKLRQRRR
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagaagaggacactcgccatcatcatcatcatcatcatcagcttgttttgtg
tctctgttggtcaacgtttctcaggagcagaccagcatggctctgaggaagcaaatactc
aaggatgctggcgacattccctccggaagccaacggattgacttaaacacacaggaggac
gaagctctagacgacaatgaggagctcctgtcgtcgtcgtcttcgtcgtcgtcgtcgtcg
tcaaggtcaagagaaaaacgcaagagagagaaggaaagcaaatccaaacccaatgagatg
acagaggaggagatgatggacttggctctgcgtctcagtgaacaggaagccagcgtcact
gcgctcagactgcagcaagaggaagaggccatgatgaaagccatccaagagagtatcgtc
agccagacacaaccgtgcccgccgtcccaaagtccgagcccgctcaacgatgcagaagct
tcactcaggctctgctctcgacggaaactcttgtactcaaacaggaagtttgcgtgtgcc
gtcagtcagggagcgtcggaggacgtctgcacaccagagacggacctgaaccgagcagac
gaaagtaacgacgggagtaaaaagcggaaaaggaaagaaggaagtcctttgctggagatg
ccagacttgtcccagactcagaagatctcctgtcaggcttcaccctgcagctcagactgc
gtctcagcgcctctggactctccgcagagctctgactccaccctgatcgatgagtgtcag
ctccataaatcccccgtcttcccctcgactggctgcagagccgaggttcacgtcccccgg
ctgagccaggacctgctgcaaacctgcagaacctcaggctttgtgttgtgctctcaggaa
agtttaacctccactctgaagtctccgcctgctcaacccaagagcccgacgtttcccaaa
agcctcaaatactccaataacttcactttgtccaggagtcctgtcttctcagagactgat
cggggagacaatggagctggactgacggagcggagtcctgagtattttaaaagtccagta
tttggcaggaatactcagcatgagacgtctgcaagtgcctgcaaacccaaagtcagcagc
tcagggttcatgttctcctctcaggagagtttaaccccctctgtgaggtccacgtcctgt
cgttctaagagcccagtattcccaaaaagcccgggcctttccacgaaccccccttcccct
gaaagatcggcaacctgcaaaagtcctgtattcccagaggctgacggaggacagacggag
cagagtcggggatgttgcacaagcccggtgatcggcaggaccggaggacgacaaaaggtc
gatgtcgatgtgcagaatcactctgagagtccttcagctgcagagctcagaggttcagac
ggtgaagggaatccaaccactaccagggatccatctcagagtctgaggcaggacagaggg
acggatcacacggcgtctgcgtcagatgatgcagaggagctgaatgaaatatccaaaaac
gggaactcggccgagacggcgccgaccagcaatatggtgctcgtctggtccgaagaggac
gacgacgtcacgccggtgggctcacccagcccggtcttcccagaggagaagcctcttcat
caggcagacagtgaggctgcttccctgaaccacgtcactgcagcttctccaggggtgaac
tgcagaccttctacctcttccacatccaccggccgactgcagcttcccaccacagaacaa
gaaccacggccaatcagcagtcagggaaccgacagcagggcgtcggccccgcctcgggac
cctgcaggcgggccgacagtgcactactactggggggttcccttctgtccacgcggcctg
gacccagacaaatacacacaggtgatcatggctcagatggaggtgtatgagaagagtctg
aagcaggctcagaggtgtctgctgaggaaggctgagtggggagaggccgtcctgccacag
ctggagaagtccccttcaccggagtcacgtgctgaatcacctcaacagctcgttcctcga
aggcgtggcctcagactgaaaggaaaaaaactgtgtgaggaagccgattcctgtcccgcg
gaggaagaagacgagaaggaggacgaggaggaaagagtgagcaaagaagaagaagagaag
aaggagcggggaggagaagaaggacacgtggatactgacgatgactgtgaagtttgtcca
gaaacccaactgagtgccatcgatgacgaccgcacgcaagatctgatgttgccgactaac
accggagcagagtctgactgtaaaatgagtcgggagcagccggaggtcgagatgattctc
cgggtcgactctccgtccgaggctgagctgcaggatgacgaggaggagatggaggtggag
gcggatgtggacagaaaggcgaagaggagcgtccctgttatcagcagcgatgttggggga
caacatgtgacaaaagaagatgtggaggagataaaagatcgagggcttcagaggtcgacg
tctcccgagctggaagcagccgccggccctcagagctctgacaccaaagtggactgtccg
atctgtcaggggtccttcccggtgacgcagatcgagaggcacgctgcgtactgcgacgga
gaggtggacgacagaaggcccgagaaggactgcttccaagtgtcattgaagcctcgtaag
aagagaaccaggacagcagaggcgagtgctgaagagactaacaaaccttccaacactggc
aagaatcaagagaaatgttacatctgtcagaaagccgttcccctgagagactacagccga
cacaccgagctctgcatccagcggcaggcgtccaagactgcagcaaagggaaatctgctg
tcggctctgcagcaaaccgagagcagagactcagaagccgggccgtctggatccaaactc
cagctgggagaagtcatagacctacgggatgatgatgatgaagatgatgatgaggaagag
ggaggcagcgtttcactgctcaggatcagcaactctcccatcagatccttcactccgatc
tcagaggccaccggctgccttatcgacttcaaaaaacagcatcgagccaagaagctgcgc
caaagacgacgatga
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