Cottoperca gobio: 115018540
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Entry
115018540 CDS
T07513
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cgob
Cottoperca gobio
Pathway
cgob03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115018540 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115018540 (nup98)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115018540 (nup98)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115018540 (nup98)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115018540 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
115018540
NCBI-ProteinID:
XP_029303432
Ensembl:
ENSCGOG00000001763
UniProt:
A0A6J2R1X5
LinkDB
All DBs
Position
14:complement(24827859..24856608)
Genome browser
AA seq
1850 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTASTFGQQNTGFGTTGGFGTSAFGATANTGGLFGPTQNKPGG
LFGSSTFSQPPASSTTTGFGFGAATGTSTSLFGNTGTGTSGGLFSQQNNAFGANKPTSFG
KVSLPSCPPGFGTSTSSGGLFGSTNTASNPFGGGAVSSLFGGAGFTAAQQQPGTTVKFNP
PTGTDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAAGTGGL
FGTPAATSSAATGLFGATAPNTNFSFGQNKSPFGAAPAAGGFGATAGGLFGTQPQQQQQP
QPQPQQQQASSLFKPFGQPTTTQSSGFSFGNTNTMGQANTSSMGLFGNAAAPQPTGLFGA
AQPSAATGFGAATGMFGQTNTGFGNVGTQQSLFGNKTAGFGATTTSAPSFGTGTGLFGNK
PALTLGTGANTSTFGFGANPAAGSLFGNKPATGGLGAALGTSFGAAVGAGQTSLFGNNQG
KLGTTLGTMGTFGTTAFNSGASALGFGAPQQPVALTDPSGAAAQQAMLQQQLSVLAYSPY
GDSPLFRNPLSDPKKKEERLKPTNPTAQKALTTPTHYKLTPRPATRVRPKALTSSGASKS
QLFDGLDDDEPSLTNGAFVPRKSIKKLVLKNLNSSQYSSPVSKESDDLASPPEYPQNGHS
HVEEEEMAGLSSRADDDPEVTQFYVNPIAKPIPQGRAQTSLQDTISDLNMHKAARNGLEL
SSEDVSASLGDESLQEDRDEEQQESQLSPHPAGIVLNRVGYYTIPSLEDLAEMVGDTADC
VVENFTVGRKGYGSIFFPGEVNVSGLNLDEIVHFRRKEVIVYPDDKNKPAEGGGLNRRAE
VTLDGVWPNDKTACMQIRSPERLTEMNYEGRLEKASRRQGARFLEYRAETGSWVFEVAHF
SKYGLQDSDEDEEVPPKADPKKLKTMTSLPASQQQVAPQAQSTVVVDLPGGMAELDSDMA
DITQSFPTESMLGGEEDSELLAGEMGGKLGGLISAEHDVVSASSHMASSLGINPHTLQIM
KASLFAEDEEDMFQDQAAMKVTSDVSSPRLVLPGAQSRPSVGGLLQARFTSGLFSQLSEP
PRPPSLFRGSPAAVEPPRSLHWAGPGPSNFLLPPRTPEPSVRTVGVRRLGGPVPLKESVT
QGKGSFLMDAGLFTGRSFRVGWGPGWTLAHCGRTLSCTDQHQEPKTDFSFLPKAARSKPL
MESSYKVVLEQLAGLQPPLNTSEEDGEREESWTVLQRPLEICLKHSTVDTVEASACPLVR
PQPGVAALHEYAEWIRELNDRQGDADPLLGSWAEVWTLCEALWGRLGPADQEPDVELSDY
EQQLERRRTFSAWLSRGATVRVEEEVALAGKGRHTEAIYSYLTGNRISEACRLAQKEGDH
RLSLLLSQATGSQFCRDLLALQLADWNRMQTDSFLPEERLRIFTLLAGKPVWQSSDSVVN
VCSELDWKRCVAVHLWFMLPPTASVADALARYEAAFQGSCEGGKYACAPLPPYLEAEQPD
LEEEEEEEEEEESKRPLHDLCFHLLKLYSDRHYSLQQLLDPLTVTWERLDYRLSWHLWGV
LQALHYSHLSASRQGLLHTSYAAQLESAGLWHMAVFILLHIPDHTQRERAVRELLTLHCP
LQDTDESARRERFLTERLRIPERWIHEAKATRARRDADRHQEALHLYRAGYWSQCHRLLI
QHLASDCIINDNHDYLLEFLEGLAVPERSATIQDWDTAGRVYLDYIRVINTLQDIQQMCV
MMVNVLQMESAGYELERLHSDVTSLCSRIELLPCSSARDRLAQSEMAKRVANILRVVLTL
QQGDAASDPLSIPLAQLAPHITRLPMPEDYTLEELRGLTQSYLRQLIVSQ
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttgggactccctttggtggagggacgggggggtttggcaccgca
tcgacctttggacagcaaaacacgggttttgggacgacgggaggctttgggacgtctgcg
ttcggggccaccgccaacactggaggactgtttggtcccacacagaataaacctggcggt
ctgtttggctccagcacgttcagccagccgccagcttcctccaccaccaccggcttcggg
tttggagcagcgaccggcacctcgaccagcctgtttggcaacaccgggaccggcaccagc
ggcggactcttctctcagcagaacaatgctttcggcgccaacaaacccacctcgttcgga
aaagtctccctcccatcgtgtcctccaggctttgggacgagcaccagcagtggcgggctg
tttgggtccaccaacaccgcctccaaccctttcggggggggggcggtttcctccctgttc
ggaggcgcggggttcaccgccgcacagcagcagccaggaacaaccgtcaaattcaatcct
ccaacaggaactgacacgatggtgaaagcaggcgtgaccacgagcatcaacacgaagcac
cagtgcatcacagccatgaaggagtacgagaacaaatccctggaggagttgaggctggag
gattaccaggcgggcaggaagggcccgaccaatccgatggccgcggggacgggcggtctg
ttcggtacacccgccgcaacttccagcgccgccaccggcctgttcggcgccaccgccccc
aacaccaacttctccttcggacagaacaagagccccttcggagcagcaccagctgccggt
gggttcggtgcgacggcaggcggcctgttcgggacgcagccgcagcagcagcaacaacca
caaccacaaccacaacaacaacaagccagcagcctcttcaagccgttcggtcagcccacc
accacacagagctccggcttctccttcggcaacaccaacaccatgggccaggccaacacc
agcagcatgggactgtttgggaatgcggcggcgccgcagccgaccggcttgttcggcgcg
gcacagccgagcgccgccaccggctttggggcggccaccgggatgttcggacaaaccaac
actggatttggaaacgtcggcacacagcagagtttattcggcaataagacggcggggttc
ggcgccaccaccaccagcgctccgtcctttggcaccggcaccgggctgtttggcaacaag
cccgccctcacgctggggacgggagccaacacctccaccttcggtttcggtgcaaacccc
gccgcagggagtctgttcgggaacaagccggccaccgggggactgggggctgcgctggga
accagcttcggagcagcagtgggagcagggcagacgtctctgtttgggaacaaccagggc
aaactgggcaccacgctgggaacgatgggaacgttcggaacgactgcattcaacagtgga
gccagcgcactggggtttggagctccacagcagccagttgcgctcacagacccgagcggt
gcggccgcccagcaggccatgcttcagcagcagctcagcgtcctcgcctattcgccgtac
ggagactcgccgctgttcagaaacccgctgtcggaccccaagaagaaagaggagcgtctg
aaaccgaccaatccgacggcccagaaggctctgaccacgcccacccactacaagctgacc
cctcgccccgccaccagagtgcggcccaaagcgctgacgtcctcgggggcctccaagtcg
cagctgttcgacggcctggacgatgacgagccgtcgctcaccaacggagccttcgtacca
aggaagagcatcaagaagctggtgctgaagaacctgaacagcagccagtacagcagcccc
gtcagcaaggagagcgacgacctcgcctccccgccagagtatccacagaacggacacagt
catgtggaggaggaggagatggcgggcctcagcagccgcgcagacgacgacccggaagtc
acccagttctacgtcaaccccatcgccaaacccatcccgcagggccgcgcccagaccagc
ctgcaggacaccatcagcgacctcaacatgcacaaagcggccaggaacggcctggagctg
agcagcgaggacgtgtcggcgtctctgggtgacgagtctctgcaggaggacagagacgag
gagcagcaggagtcccagctgtctcctcaccctgcaggcatcgttctgaaccgtgttggg
tactacaccatcccctccctggaggatctggcggagatggtgggcgacaccgccgactgt
gtggtggagaacttcaccgtcggcaggaaaggctacggctccatcttcttccccggcgag
gtgaacgtgtcgggactgaacctcgacgagatcgtgcacttcagacgcaaagaggtcatc
gtgtacccggacgacaaaaacaagcctgcagaggggggggggctaaacaggcgagcggag
gtgactctggatggcgtttggccgaacgataagacggcctgcatgcagatccggagcccc
gagcgcctgacggagatgaactacgagggtcggctggagaaagcctcgcgcagacaggga
gctcgtttcctggagtacagagcagagacgggatcctgggtgttcgaggtggcccatttc
tccaaatatggcctccaggactctgacgaggacgaggaggtcccgcccaaagccgacccc
aagaagctgaagacgatgacgtcacttcctgcctcccagcagcaggtggcgccacaggct
cagtccaccgtcgtcgtggatctcccgggcggcatggcggagttggacagcgacatggcc
gacatcacgcagagcttcccgacagagagcatgctgggaggagaggaggacagtgagctg
ctggcgggggagatgggagggaagctcggaggtctgatctccgcggagcacgacgtcgtc
tctgcatccagccacatggcgtcctcgctggggatcaacccgcacaccctccagatcatg
aaggcgtctctgtttgctgaggatgaggaagacatgtttcaggatcaggcagcgatgaag
gtcacctctgacgtctcgtcccctcgcctcgtgctgccgggagctcagagccgaccctca
gtgggtggcctccttcaggctcggttcacctccggcctcttctctcagctgtcggaaccc
ccccgtcctccttctctgttccgaggttccccggctgccgtcgaacccccccgctcgctg
cactgggccggtccgggcccctccaacttcctgctgcccccccgcactccagagccttcg
gtcaggacggtgggcgtccggcggctcggcggccccgtccccctcaaagagtcggtcacc
caggggaaggggagttttctgatggacgccggcctcttcacaggtcgctccttccgggtc
ggctggggtcccggctggacgctggcgcactgcggacgcacactgagctgcacagaccaa
caccaggaacctaaaacagacttcagcttcctgccaaaagctgccaggagcaaaccgctg
atggagagctcctataaggtcgtgttggagcagctggcgggtctgcagcctccattgaac
accagcgaggaggacggggagcgggaggagagctggacggtgctgcagcgccccctggag
atctgcctgaagcacagcaccgtcgacacggtcgaagcctccgcctgccctctggtgcgc
ccgcaacccggcgtggcagcgctgcacgagtacgccgagtggatccgcgagctgaacgac
cgacagggagacgcagaccccctcctgggctcctgggcggaggtctggactctgtgtgag
gccctgtggggccggctgggtcctgcagatcaggaacccgacgtggagctcagcgactac
gagcagcagctggagcggaggcggaccttctcggcctggctgtcccgcggagccaccgtc
agggtggaggaggaggtggcgctggcggggaagggtcgccacacggaggccatctacagc
tacctgacgggcaaccgcatcagtgaggcgtgcagactggcccagaaggaaggagaccac
cgtctgtccctgctgctctctcaggccacgggctctcagttctgccgggacctgctcgcc
ctgcagctcgccgactggaaccgcatgcagaccgacagcttcctgcccgaggagcggctg
cgcatcttcacgctgctcgccgggaaacctgtgtggcagtcgtcggactccgtggtcaac
gtgtgctctgagctggactggaagcgctgcgtggccgtccacctctggttcatgctgcct
ccgaccgcctccgtggccgacgccctcgccagatacgaagccgccttccagggctcgtgt
gagggggggaagtacgcctgcgcccctctgcccccatacctggaggcggagcagccggac
ctggaggaggaggaggaggaggaggaggaggaggagtctaaacgtccgctgcacgacctc
tgcttccacctgctcaaactctacagtgacagacactacagcctgcagcagctgttggac
cctctcacggtcacctgggagcgtctggattaccgcctcagctggcacctgtggggcgtc
ctgcaggcgctgcactacagccacctgagcgcctcgcggcagggcctgctccacaccagc
tacgccgcacagctggagagcgccggcctctggcacatggccgtcttcatcctgctgcac
atccccgaccacactcagcgggagcgagccgtgagggagctgctaaccctccactgcccg
ctgcaggacacggacgagtctgcgcggagggagcgcttcctgaccgagaggctgcggatc
ccggagcggtggatccacgaggccaaggccacccgagcccgccgcgacgccgaccggcac
caggaggccctgcacctgtaccgggccggatactggagccagtgtcaccggctgctcatc
caacacctggcctcagactgcatcatcaacgacaaccacgactacctgctggagttcctg
gaggggctggcggtccctgaacgcagcgccaccatccaggactgggacacggcggggaga
gtttacctggactacatccgagtcatcaacactctgcaggacatacagcagatgtgtgtg
atgatggtaaatgtgttgcagatggagagcgctggttacgagctggagcgtcttcacagt
gacgtgacgtctctgtgcagcagaatcgagctgctgccctgcagctccgccagagaccgt
ctcgcccaatcagaaatggcgaagcgtgtggccaacatcctgcgagtggtgctgaccctg
cagcagggcgacgctgcctctgaccccctcagcatcccgctcgcacagctggcgccgcac
atcacccgcctgccgatgccggaggactacacgctggaggagctgcgcggcctcacgcag
tcgtacctgcggcagctcatcgtcagccaatga
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integrated database retrieval system
