Cottoperca gobio: 115018756
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Entry
115018756 CDS
T07513
Name
(RefSeq) interferon regulatory factor 1-like isoform X1
KO
K09444
interferon regulatory factor 1
Organism
cgob
Cottoperca gobio
Pathway
cgob04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
115018756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115018756
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115018756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
115018756
NCBI-ProteinID:
XP_029303819
Ensembl:
ENSCGOG00000013625
UniProt:
A0A6J2R0L4
LinkDB
All DBs
Position
14:19922906..19927008
Genome browser
AA seq
298 aa
AA seq
DB search
MPVARMRMRPWLQEKIESNSVLGLTWIDKNKTMFSIPWKHAARHGWEMDKDASLFKQWAI
HTGKFVEGQTCDPKTWKANFRCAMNSLPDIEEVKGKSINKGHQAVRVFRMLPASPKSKDK
QSKAKETKPKKKSSVIKMEEEADCSNTEFPMKESTPEDSSFTQENTVDSTVHTEQPDFSF
MAPSEVPDWSSSVEIDSSFPFSHRFQVSPEHDLPAYELTDDIIQICQQLEKDSNWTTSSL
DYKGFLSNEACTSPGSQWSDSSSVDELDEMPHYTTLGSDFSNPTDNLWNNMFQIMPMH
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtggcaaggatgaggatgaggccatggctacaggagaagatcgagtccaattca
gtcttgggtctgacttggatagacaagaataagaccatgttctcaatcccctggaagcat
gcagctcgacacggctgggagatggataaagacgcaagtctgttcaaacaatgggccatc
cacacagggaaatttgtcgaaggtcagacttgtgacccaaagacatggaaagccaacttc
cggtgtgcaatgaactcgcttcctgacatcgaggaggtgaaaggcaagagcatcaacaaa
ggccaccaagctgtgcgtgtgttcaggatgctgcctgccagcccaaaatctaaagataaa
caaagcaaagcaaaggaaacaaagccaaaaaagaagagctcagtgatcaagatggaggaa
gaagcggattgcagtaataccgagtttcccatgaaagagtcgacaccggaagactcttcg
ttcactcaggagaacacagtcgacagcacagtgcacactgagcagccagatttctcattt
atggctccatctgaagttcctgactggtcttcgtcagtggagatcgactctagctttcca
ttcagccacagatttcaagtttcacccgagcacgatcttccagcgtacgaattaaccgac
gacataatccagatttgccagcaactggagaaagattcaaactggacgacaagcagttta
gactacaaggggttcctgagcaatgaagcatgcaccagtccagggagccagtggagtgat
tcttcctcagtcgacgagctagatgagatgccacattacacaactttgggctcagacttc
tcaaatcccacagacaacctctggaacaacatgtttcaaattatgcccatgcattga
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