Cottoperca gobio: 115018902
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Entry
115018902 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
115018902
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgob01009
]
115018902
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgob04515
]
115018902
Protein phosphatases and associated proteins [BR:
cgob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115018902
Cell adhesion molecules [BR:
cgob04515
]
Cadherins
Protocadherins
115018902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
He_PIG
PepSY
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
115018902
NCBI-ProteinID:
XP_029304018
UniProt:
A0A6J2QZQ1
LinkDB
All DBs
Position
14:complement(12114075..12206688)
Genome browser
AA seq
1190 aa
AA seq
DB search
MELHFRLVLFWVLVLHCGSAEGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSDRNGVADYALTAGPDAATL
FGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAMDGGNPQRYSSALLRVVVTDANDN
TPKFERSSYEAEVSENSPVGHSVLQVKANDSDMGPNGEIEYTLHQAVDPVPKLLRIDRST
GIIYVKGSLDREEISSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPVVEIRGIGLVT
HSEGVANISEDMPVGTAVALVQVSDKDEGENAMVTCVVAGDVPFQLRPASDSSSDNKRKY
FLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQPGEKVLDVIASDADSGTNAELLYSIVADSSIKGLFEIDPNTGEVRARSPLDREHKE
RYEFRVTAADKGSPVHKGTATVVINVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTV
LDVDKGENAHVRLSVEPDGGKFVVQNGTGTILSSISFDREKKXSYTFRLKAVDGGEPPRS
SYVGVTINVLDENDNNPVVTKPSNSSFRRLSPLASPDSHVEVVEAEDLDSGPNAELVFSI
SGGNPHQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPARHATALVHIYVNETI
SNVSLVEALVGHSLYTPLERDIAGDPDNGFAAQRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQTPKNAKGKRGRKGKPHKSPKPLGEDEEVSLQKSLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQLKYSNKQHTHRRVTFSTSNPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTTECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSARLGGEEHR
SRLPPSRSAYSNSGNDASQDCPLEEMPLSVASEFPPTSPSAHTPKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaactacatttccgattagtgctgttctgggtcctggtgctgcactgtggctccgct
gaaggcagtatcctgtaccgcgtccaggaggagcagcctcccaacactcttattggtagc
ctggcagcagaccagggcctgccagactcgggccatctctacaagctggaggtgggtgcc
ccttaccttcgcgttgatggaaaaactggagacatcttcaccacagagattcccatagac
agagagaccctgagggactgtcgatctctggtcaagggtaagccctgctaccttgaattt
gaagtatcagtcacagacctgatacaaaaccagagcccacgactcattgaaggacgcatt
gaggtacaagacatcaatgacaacactccgcaattcccctcttctgtgctcaccatctct
gtcccagagaacacgattatgggggccctattctccatacctctagctacagatagggac
tcagacaggaatggggtggcagattatgctttgactgcagggccagacgcagcaacccta
tttggtttacaggtggctgacgacaggggggggaagctcccgcagctcattgtcctcggc
aacctagatcgcgagttaaaggattcctatgacctcacgatcaaggcaatggatggagga
aatccacagcgctacagcagtgctctgctgagagtggtagtcactgatgccaatgacaac
actcccaagtttgaaaggtcctcttatgaagcagaagtgtcggaaaacagtccagtgggg
cactccgtgttgcaggtcaaagccaatgactctgacatgggccctaatggagaaattgag
tacacccttcaccaagcagtagacccagtgccgaaactcttaagaattgatcggtccact
ggcatcatctatgtcaaaggatccctggacagggaggaaatcagcagcttgtccttctat
gtggtggcaagggacaagggtcctcaacctaaaagctcaaagacatttgtaaccattgag
gtgactgaccagaatgacaacgctccagttgtggagattcgtggaattggtcttgtgaca
cacagtgaaggagtggctaacatttcagaggacatgccagttggaacagctgttgcgttg
gtgcaagtgtctgacaaggatgagggagagaatgctatggtcacttgtgttgtcgcagga
gatgtgcccttccagcttcgtcctgccagtgattcatctagtgacaacaagaggaagtat
ttcctacagacaaccactccccttgactacgaaaggattagggattaccgagtagagatt
gtggctgtggattctggaaatccagctctctctagcacaaattctctgaaggtgcaggtg
actgatgtgaacgacaactctccaatattctccccaaccttgtttgaggtagattttgcc
gaagaaaaccaacctggggagaaggttttggatgttatagcttcggatgctgatagtggc
actaatgcggaactcctctatagtattgttgcagactcatccatcaaaggtctgtttgag
attgatccaaatacaggtgaagttagagcccgaagcccgcttgaccgtgagcataaagaa
cgctacgagttccgggtcaccgcagcagataaagggtcaccagttcataaaggaacagca
actgttgtaataaacgtccttgaccgcaatgacaatgaccccaagttcatgcttagtggc
tacagtttttcagttttggaaaacatgcctcccctcagtccagttggtatggtgacagtc
ctggatgtggataaaggggaaaatgctcatgttcgcctttctgtagagcctgatggaggg
aagtttgttgttcaaaatggaacaggcaccattctttcaagcatctcatttgacagagaa
aagaaangcagctacactttccgtctaaaagcagtggatggaggagagccaccacggtct
tcatatgtcggcgttaccatcaatgtactggatgaaaatgataacaaccctgtggtcacc
aagccctccaactcttcatttaggcgcctgtcccctctcgcttccccagatagccatgtt
gaggtagtggaagctgaagacctggatagtgggcctaatgcagagctggtcttcagtatt
tctggtggaaaccctcaccagttatttcgcatttccccgtccagtggggagatcactcta
gcaaaagagatgacccggaaacatggcggactacatcgcctagtggtgcgagtgagtgac
agggggaagcctgcacgccatgccactgccctggtccacatctatgtaaatgaaaccatt
tcaaatgtcagcttagtggaggccctagtaggacacagtctttacactccactggaaagg
gacattgctggtgatcctgacaatggttttgctgcacagcgtagtaacattttgtttgga
agccttgccggtgtggcaggtgttgtcatgttgatcttggtggtagtatttattcgacat
cgcatccagagagaaactaagagtgggtatcaggctggaaaaaaggaaacaaaggactta
tatgcaccaaaacaaacaccaaagaatgctaaaggtaaacgtggaagaaaaggaaaaccc
cataagtccccaaaaccactcggggaagatgaggaagtcagccttcaaaagagtctcaag
ttcaaccttgatggagtcaatgatagccccaggatacacctgccactaacatattcacca
ggaagccctgatataggcaggcactaccgctccaactctcccttaccctccatccagctg
caggcccaatccccttcagcctcacagaaacatcaggctgtccaggaccttcctgccgcc
aacacttttgtaggaacgggaggagatgacaactctaccggctcagaccagtactcagat
tacagctacaagaccagccaactgaagtacagcaacaagcagcacacccatcggcgagtg
accttctccaccagcaaccctgtgcaggacctgcaggacgcctctcagcacagctactat
gacagcggcttagaagaatcggagactcccagcagcaagtcatcgtctggtcctcgcatc
ggacccctgaccctgcccgaggaccactatgagagaaccactccagatggcagcattggc
gagaccgagcaccctgaaaacgatatccgctcgctccctgatgtggcgatgaccggaaac
tgtacaaccgagtgcagcgagctgggccactcagacgcctgctggatgcccgggcatccc
tcccccgtacgcaagaccaggaaccccccgaaactctccaccttcgtgccttaccaggag
agagggagcctgggtcgcctggctaacgggagcgccaggctgggtggcgaggagcaccgg
tcgcgccttccgccctcccgcagtgcctattccaacagtggtaacgacgccagtcaggac
tgccccttagaggagatgcccctgagcgtggcatctgagttcccacccacctccccctcg
gcccacactcctaaaagggaaatttacctgtga
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