Cottoperca gobio: 115018910
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Entry
115018910 CDS
T07513
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgob03009
]
115018910 (ddx52)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115018910 (ddx52)
Ribosome biogenesis [BR:
cgob03009
]
Eukaryotic type
90S particles
Helicases
115018910 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
115018910
NCBI-ProteinID:
XP_029304030
Ensembl:
ENSCGOG00000016738
UniProt:
A0A6J2R3W2
LinkDB
All DBs
Position
14:7474220..7480115
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AA seq
705 aa
AA seq
DB search
MSRMLTSDAWMRNDHAAVEMDAFELFRKLGAGAKFDLKRFGQDAARFKVARSHGGDASAD
ALSAIDYFGTGPANGSKSSAVVLDDDDDDDDDGEEYEGGSESEESGAGGKRKQKDEEKDV
GTQKKKTKRDQVEAGGRALKDTEGSGIAWTSSLDRKIQNLPSDVKEKSSLKRLKHLHQEK
VNRIRSQHRINVHGCDIPDPVCTFEELQSEYRLNPRVLLNIKDAGLSSPTPVQMQAIPLM
MHSRELLACAPTGSGKTLAFCLPLLAHLQQPTNLGFRAVIIAPTRELANQTYRELLRLSE
GVGFRVHIIDKASLAAKKYGPQSNKKYDILVSTPNRLVFLLNQDPPALDLSSVEWLIVDE
SDKLFEGGKTGFREQLAEVFQACSGSKVRRAFFSATCTPDVEQWCRLNLDNLVSVNIGHR
NAAVETVEQKLLFVGTENGKLVAMRDIIKKGFLPPMLVFVQSIDRARELFHELVYEGINV
DVIHADRTQQQRDNVVNSFRSGKIWVLICTALLARGIDFKGVNLVLNYDFPTSSVEYIHR
IGRTGRAGHQGKAITFFTENDKPLLRSIANVIKQAGCPVPDYMIGFKKIHSKVKRRLEKR
PPKRSTICTTPRFLMKNKGKAQNKGQNVEKPEAGGEQKGENVSQTAVQQQKGKKKTKGIE
LKRRNKTQKEGAREKNKKASQKTESNSSVAKLKKKKGNKNKPQED
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagccggatgttgactagtgatgcctggatgcggaacgaccacgctgctgtagaaatg
gacgccttcgagttgtttcggaaactcggagctggagctaaatttgacttgaagagattt
ggtcaagacgccgctcggtttaaggttgccaggtctcacggaggtgatgcgtccgcagat
gctctctctgcgatcgactactttggcacaggacctgccaatggatccaagagcagtgct
gtagtactggatgatgatgatgatgatgatgatgatggagaggaatatgaggggggaagt
gaaagtgaagagtctggtgcaggaggcaaaaggaagcaaaaggatgaagagaaagacgtg
gggacacaaaagaaaaagacaaaacgcgaccaggtggaagctggtggcagagcgctgaaa
gacaccgagggaagcggcatcgcttggacatcctcactggacagaaagatccaaaacctg
ccgagtgatgtgaaggagaaatcctcgctgaagaggctgaagcatcttcatcaggaaaag
gtgaatcgtattcgctctcaacaccgtataaatgtgcacggctgcgacatacccgacccc
gtgtgcacgtttgaggaactgcagtccgagtatcgcctcaacccgcgtgtccttctgaac
atcaaagacgcggggctgagttccccgacgccagtacagatgcaggcgataccgctcatg
atgcatagtcgggagctcctggcatgcgctcctacgggatccggaaagactttggctttc
tgtctcccactgcttgcccacctgcagcagccaaccaacctgggcttcagagctgtcatc
atcgccccgaccagagaactggccaaccagacctacagagagctgctccgcctttcagag
ggagtaggatttagagttcacatcatagacaaagcctctctggcagccaagaaatatgga
ccacagtcaaacaaaaaatacgatatactggtcagtactccaaacagactcgtcttcctt
ctcaatcaggatcctccagctctcgacctcagcagtgtggagtggctgattgtcgatgag
tccgacaagctgtttgagggcggtaagacgggcttcagggagcagctcgccgaagttttt
caggcctgttctggttcaaaggtgcgcagggctttcttcagcgccacctgcacgccagat
gtagagcagtggtgccgtctgaacctcgacaacctggtgtctgtcaacattggacacaga
aatgcggcagtggagacggtggaacagaagctgctgtttgttgggacagagaacggcaaa
ctggtggccatgagggatatcatcaaaaagggtttcctgccgcccatgctggtgtttgtg
cagtctatcgaccgagcacgggagcttttccacgagttagtgtacgaaggcatcaatgta
gacgtgatccacgcagaccgcacacagcagcagagggacaacgtagtaaacagtttccgg
tccggtaagatttgggtgttgatctgcacggctttgctcgccagaggaatcgacttcaaa
ggagtcaacctcgtgctgaactacgacttccccaccagctctgtggagtatatccaccga
attggtcggactggtagagctggacatcaggggaaggccatcaccttcttcacagaaaat
gacaagccactgctgcgcagcatcgctaatgtcatcaagcaagctggctgtccggtaccc
gactacatgattggcttcaagaagatacacagcaaagtgaaacggagacttgagaagaga
cctcccaagagaagcaccatttgcacaactcctcgcttcttaatgaagaacaaaggtaaa
gcccaaaataaaggacagaatgtggagaagccagaagcgggtggagagcagaaaggagaa
aatgtatctcaaacagcagtgcaacagcagaaagggaaaaagaagacaaaaggaatagaa
ctgaagagaagaaataaaacccagaaagaaggggcaagagaaaagaacaagaaggcgtcg
cagaagacggaatcaaattcctctgtagccaagttaaaaaagaaaaaggggaataaaaat
aagccacaagaggattag
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