Cottoperca gobio: 115019315
Help
Entry
115019315 CDS
T07513
Symbol
thsd1
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgob04990
]
115019315 (thsd1)
Domain-containing proteins not elsewhere classified [BR:
cgob04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
115019315 (thsd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
115019315
NCBI-ProteinID:
XP_029304672
UniProt:
A0A6J2R5G2
LinkDB
All DBs
Position
14:13737296..13744205
Genome browser
AA seq
960 aa
AA seq
DB search
MPQAVSLLPFLLALMGYAFAGLNIWPSFHVALSNASVFVDFSTKSNSSTIRNSSLSLVNT
ETNTTLQTRTLPYNQSAGRVEFNCSCFLYSGTFRFLLRQTIISAVSRANGTADDSSTEST
TWWWSSELQVQWPTFHIAVERAGNHSGSFQVGITTNEHFQACSSGIDSALFLEVSYMEYN
QIGRISIDKVQARTRLPIKPLRSQSVELSCAFPFTERDFIRVALRSPHAAQDVKSSGPLY
LSRIFSYKLLVENTNAYRSGCEGTVTIKLITPPCAHINGKVLLYKDAGVGRGVAVSSGME
AAGTALMGFGPEEPSSPLLAFNWLTQGENETEFNCSVFNPGRNKYCFRFVFNFSRSPSPA
QTCLVVHRSAESWGPWLQWSLCSVSCGEGVRERVRECLLPSGVGGMQCTGMVKEQSLCSL
EDCVVLPAPSPSLPSVAVGVAPLGGNMVVVVGISLCLAVILATIVVTLWRKLCKTPQCNS
VRTGSMHSPGGRKLSDEASICGYSLQRPSLSDGHGPPGGVGVAQKERPSLGSQPLSQTLV
IPLSQDPDRLSPTCQKMLPPIFGYRLAQQQLKEMKKKGLKEATLLYHVSSSPVNDTVVET
SASPTNSLIATLTGLAHPTLPLGLQEDANRNHFCIAATFSEPLSQTSKVTPDSLSPRAEL
VLGPSVSAHASGGSSKWRDRTADWVEMVERSGFAGFRGGGGGGEDAGMGNSYHKNPNFHR
TSSFNDTKPQPLSSVHSRQFRERSMTQVGSRTLPEGSCWNKGGRDRQPYNSYPIPEHGVP
DWAKSRPQRNDQRMPWIETAVLSHNNELKHTGTNTNSLLASEKHVKAELSGTGERQRSGE
TGGVVGISGIGGPATGPLSLSVDRAERAELNWNRRGPSPIQRNILARKLKEAQSCSGVKG
RQRSSTFSVSPSEQRTGRCRSLPMSGGYSSSGGGSPYRLSESEQRMLDLDLSSAYVGEEE
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggctgtctcactgctgcccttcctgctggcgctcatgggatatgcttttgca
gggctcaatatctggccctccttccatgttgcgcttagcaacgccagtgtatttgtggac
ttcagcacaaaatccaacagcagcacgatccgcaactcaagcctctctctggtcaacacg
gaaaccaacaccacccttcagaccaggactctcccctacaaccaatcggccggtagggtg
gagttcaactgttcgtgcttcctgtattcaggaactttccggtttctgctgaggcagacc
atcatctcagctgtttctcgtgctaatggcacagctgacgacagtagcacggagagcaca
acctggtggtggagttcagaactgcaggtgcagtggcccacctttcacatcgccgtggag
agggccggaaaccactcgggatcttttcaggttgggataaccactaatgaacacttccag
gcatgctccagcggcattgactcggctctcttcctagaagtcagctacatggagtacaac
cagataggacgaatcagcatcgacaaggttcaagcccgcacacgactcccaatcaaaccc
ctccgctcccagagtgttgagctgtcctgcgccttccccttcacagaaagagacttcata
cgagtggctctacggtctcctcacgcagcacaggatgtgaaaagctctggacctctctac
ctgtcccgtatcttctcctataagctgctggtggaaaacaccaatgcgtaccggagtgga
tgcgaagggacggtgactattaaactgataaccccaccttgtgctcacatcaatgggaaa
gtactgctgtataaggatgcaggtgttggaagaggggttgctgtctcctctgggatggaa
gcagctggaacagcactgatggggtttggaccagaggagccctcttcacctctgttggcc
tttaactggctgactcagggggagaatgagacagaattcaactgttctgtgtttaacccc
ggaaggaataagtactgctttcgctttgttttcaacttcagtcgttcccctagtccggca
cagacctgtttggtggttcacaggagtgcagagtcatggggcccgtggctgcagtggagt
ctgtgcagtgtgagctgtggagagggggtgagggagcgagtgcgtgagtgtttgctgccc
tcaggtgtgggagggatgcagtgcactggcatggtgaaggaacagtccctgtgctcgctg
gaggactgtgtcgtgttgcctgctccttctccgtccctcccctctgtggctgtcggagtt
gcacccctaggtggtaacatggtcgtggtggttggtatctctctttgcttggctgtgatt
ctggctaccatcgtggtgactttgtggagaaaactttgcaagacccctcagtgcaactct
gtccgcacaggctccatgcattccccaggaggacgcaagctctccgatgaggcgtccatt
tgtggctacagcctccaaagacccagcctgtctgacggccacggcccaccagggggcgtg
ggtgttgcccagaaagagaggccttccttgggcagtcagcctctctcacagaccctggtg
atacctctctcacaggatccagacaggctgtcccccacatgtcagaaaatgttgcctcca
atatttggataccgattggctcagcagcagttgaaagaaatgaagaagaaggggttaaag
gaggccacactgctgtatcatgtgtcttcaagcccagtcaatgacaccgtggtagagaca
tctgcctcacccacaaactccctcattgctacattaactggattagctcatcccacactc
cctttgggcctccaggaagacgctaaccgcaatcacttttgcattgcagcaaccttttct
gagccgctatcgcagacttccaaggtcaccccggacagtctgagtcccagagcggagctg
gtcttaggtccttctgtctcggctcatgcaagtgggggcagctcgaaatggcgtgaccgc
acagctgactgggtggagatggtagagaggagtgggtttgcaggtttcagaggaggagga
ggaggaggagaagatgcagggatgggaaactcctatcataagaatccaaatttccaccgg
acctccagttttaatgacaccaaaccccaacctctatcctctgtacactccagacagttc
agagaaaggagcatgacccaggtgggatctcggacccttcctgaaggaagttgttggaat
aaaggaggacgggataggcagccatacaactcttaccccattccagagcacggggtccca
gactgggctaaatccagaccccagagaaatgaccagaggatgccctggatagagacagct
gttctttctcacaacaatgaacttaaacacacaggaaccaacacaaacagccttttagca
tctgagaaacatgttaaagcagaactcagtggcactggggaaaggcaaaggagtggcgag
acaggaggtgtagtgggaatctcagggatcgggggtccagccacagggcctctcagcctg
agtgtggatcgagcagagcgtgctgagctgaactggaaccgtcgcggcccatcgcctatc
cagaggaacatcctggcccggaaattaaaggaggctcagtcgtgctctggggtcaagggg
cggcagcgcagctccacctttagtgtgtcgccctcagagcagaggacaggtcgctgccgc
tctctgccgatgtctggaggttacagcagcagcggcggcggctcgccctacaggcttagt
gagtcagagcagaggatgttggacctggatctgtcctcagcatatgtaggggaagaggag
tag
DBGET
integrated database retrieval system
