Cottoperca gobio: 115019394
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Entry
115019394 CDS
T07513
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cgob
Cottoperca gobio
Pathway
cgob04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115019394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115019394
03036 Chromosome and associated proteins [BR:
cgob03036
]
115019394
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115019394
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115019394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
115019394
NCBI-ProteinID:
XP_029304789
UniProt:
A0A6J2R399
LinkDB
All DBs
Position
14:10088039..10109451
Genome browser
AA seq
1671 aa
AA seq
DB search
MSAAMLSTTTSKLNVLVNKLHEYLAQSTVEDSNGSPTSADGPTNRSCSVGNSLGHTVTEA
GVDTKYSRRKPSVVIRHSGLDESGDSNASEDVVLPVIANSHPDITRLPKGTVLVRPEPVD
NGKDDFRGPEFRSRKPGVLRKEFSRRRGGVEHMEIVSCTACGRQVNHFQRDSFYRHPVLK
VLICKSCYKYYSSDDISKDGDGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLGRKEL
SGILESKWYCYVCSPEPLFDLVMACDSILENMEQRRKNRVEPEKSQLYHMLPHLPQNIPL
DNWDHTGMDGNVVFNYNTLQISKDVTKRAKHLVDSTNILNRTFVNFIHNVTTNKQTPVVR
KLYLNSFLSVVKGLRKSLTALEDSLKEEFSDLDVMSCWEKFFSEDFDAQPVIDANTQPDI
PDERCLSDLQKLAAEHLEDYDSDSKVFTDGRTAHACPGENMDSASHDQTIGFKSSESAIN
MTKKLVVKLTPVPMEQETSSDAPMMETDLHMNDKTSEGKVVSEDKDTFVEGTKADSKLSN
DNSSASLHPEEEQGNRRSPRVKTTPLRRPSDVKATKSHSAADSDSDSDHEETSNTVPANN
TEENILSRARDDSDSDEVPVALLERAAMTQSSDEPKSDENAGKASTKVAKKCLFWLTKNT
PISPENMRRKRKMLDISPESDSSNRRVKSRREIGTDSSSDDQDSQKKMQHLNTLRPIGKS
PHVKREDDGSAINPGRIQAGKSKTKSLQKAMESSSSSSEDEDEDEEDEDDSGSEGSDQKM
KPITEDVALLGAAAFHQSSGEEDHSGLSWAAEDDDDPENRIAKKMLLAQIKANYSSGDDI
SSDEETQDESDSEDEKEVKQDHEENETDENGEESTSDGPTTRHHLLRHKLTLDEGAPSDK
TVAESEGAEPECKQKASSKRLNSDGDGDSNESELEDLGMSEELSQSEDEASEDKPKRGSS
KGKKASSSYEKKLQVPCIWLSDSNSEKSDKEDADEENSDGKGTPKGRKKIRKIIDDVNLR
AETQEALREEEERCKRLAEREQQMEDRREIIVIEDELSLVACPITTKLILDQDEKTKKPL
VQVHRNLVTRLKPHQVDGVQFIWDSCCESVKKANSSPGSGCILAHCMGLGKTLQMVTFLH
TVLLSENLKFRTALVVCPLNTILNWVSEFKKWQSNMGQDKVTVTELATIKHPPERIRALQ
RWKREGGVMIMGYEMYRILSLAKKINDEKCKKELKSILVDPGPDFAVCDEGHILRNEASN
ISKSMNAIKTQRRVVLTGTPLQNNLNEYHCMVNFIKKNLLGSLGEFRNRFINPIQNGQCA
DSTSRDVRIMKNRAHVLHAMLAGCVQRRDYSELTQFLPPKHEYVLAVRLSPHQYKLYRYY
LDNVTGMGSVTNRAKARVGANLFKDFQVLSRIWTHPWCLQLSYISREKKGYFIKRNKNKA
STLLRNEDAAVAESGLRAIEGAEGNINASSTAGNVGVSNGAPAVEGEKTTVSARSQNQDE
GWFKNLLSEEDAKILAHSGKMVLLFEILRMAEDLEDKVLVFSQSLISLDLIEDFLKASHH
ARNPSSFKAGSWIRNIDYYRLDGSTSAVLRKKWADQFNNATNVRGRLFLISTRAGSLGIN
LVAANRVIIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRFLAQGTYGGEDL
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcaatgctgagcaccactaccagcaagctgaatgtattggtcaacaaactg
catgagtacttggctcaatctactgttgaggacagcaatggctcgccaacctcagctgat
ggtccgacaaacaggagctgttctgtgggaaactcactaggtcatactgtgacggaggca
ggagtggatacaaaatactcaaggagaaaaccgtctgttgtcatacggcactctggactg
gatgaatctggggactcgaatgcaagtgaggacgtggttttaccagtcattgcaaatagt
caccctgatatcactagattaccaaaaggcactgtcctggtgaggcctgaacctgttgat
aatgggaaagatgacttcaggggtcctgagtttcgcagccggaaaccaggggtactgcgg
aaagagttttcgagaagacgtggaggagttgaacacatggaaattgtcagttgcactgct
tgtggccgacaagttaaccacttccagagagattccttttatcgacatccagttctgaaa
gtacttatttgcaagtcctgctacaagtattactcaagtgatgacatcagcaaggatggg
gatggaatggatgagcagtgcagatggtgtgctgaaggaggcaacttgatctgttgtgac
tactgtagtaatgccttctgcaagaagtgtattctaagaaatttgggaaggaaagagctg
tctggcatcttggaaagcaagtggtactgctatgtgtgtagcccagagccactttttgac
ctggtgatggcctgtgacagcatcctggagaacatggagcagcgcaggaagaaccgagta
gagccggagaaatctcaactttaccacatgttgccacacttgccacaaaacattcctttg
gataactgggatcacactggtatggatggtaatgtggtgttcaactacaacacactgcag
atttcaaaggatgttaccaaaagggccaaacatttggtggactcgacaaacatcttaaac
cggacatttgtcaatttcattcataatgtgacgacgaacaaacaaacacctgttgttcgc
aagctgtacctgaattcttttttgtcagtagttaaaggtttgcggaaatcacttacagca
ctcgaggatagccttaaggaagaattcagtgacttggatgtcatgagctgttgggaaaag
ttctttagtgaagactttgatgcacaacctgtaatagatgccaacacacagccagacatc
cctgatgaaaggtgtttgagtgacttgcagaaattggctgcggaacatttggaagattat
gattctgactccaaggtcttcacagatgggagaactgcacatgcctgccccggcgaaaac
atggattcagcttcacatgatcagacgattggctttaagtcttctgaaagtgcgatcaac
atgactaaaaaactagttgtaaaactcacacctgtaccaatggagcaggagacatcctct
gatgccccaatgatggagacggacctccacatgaacgataaaacgtcagagggaaaggtt
gtatcagaagacaaagacacatttgttgaagggactaaagctgacagcaagttgagcaat
gacaactctagcgcatctctacatccagaagaggaacaaggcaatagacgctctcctcgc
gtgaagacgacacctttgcggcgaccaagtgatgtcaaggccacaaagtctcattcagca
gcagacagtgacagtgactctgaccacgaggaaacttccaacacggtacctgccaataac
actgaagaaaatattctgagcagagcaagagacgactctgactccgatgaagtccctgta
gctctgcttgagcgagctgctatgacgcaaagctccgatgaacccaagagtgatgagaac
gcgggaaaagcgtcaactaaggtggccaagaaatgtctcttttggctcacgaagaacacc
ccgatctccccggagaacatgcgccgcaaacgcaagatgctggacatttcccccgagtcc
gactcaagtaacagaagggtaaaatctcgaagggaaattgggacagattcctctagtgat
gatcaagactcgcagaagaaaatgcaacacttaaatacactgaggccaatagggaagtct
ccccacgtcaaaagagaggatgacggttcagctataaacccgggtaggatacaggctgga
aagtctaagactaaatctctccagaaagcgatggagtcgtcatcctcatcaagcgaagat
gaagatgaagatgaagaggatgaagatgactctgggagtgaaggaagtgatcagaagatg
aagccaatcactgaagatgtggccttactgggggcagcagcattccaccaatcatcggga
gaagaggatcactctgggctctcgtgggctgcagaagatgatgatgatccagaaaataga
atcgctaagaaaatgctattggcccaaatcaaagccaactactcctcgggcgacgatatc
tcttcagatgaggagacacaggatgaatctgattcagaggatgagaaggaggtcaaacaa
gaccatgaggagaatgaaaccgatgagaatggggaagaatccacatctgatgggcccacc
accaggcaccaccttctccgccacaaactaaccttagatgagggagcgccgagtgacaag
accgtggcagagagtgaaggagctgagccggagtgcaagcaaaaagccagcagcaaacgc
ctgaactctgatggtgacggtgacagtaacgagtccgagctggaggatcttgggatgagc
gaggagctgagtcagtcagaggacgaagccagtgaagacaaacccaaaagaggatccagt
aaagggaagaaggcgtccagtagttacgaaaagaagctgcaagtgccctgcatttggttg
tctgactccaacagtgaaaagagtgataaagaggacgcagatgaggagaacagtgatggt
aaaggcacccccaaaggacgcaaaaagatccgcaaaatcatcgatgatgtgaatctccgc
gctgagacccaggaagccctcagagaggaggaggagagatgcaaacgtttggcagaaagg
gaacaacagatggaggacaggagagagatcattgttatcgaggatgaactgtctctggtg
gcgtgtcccatcactaccaagctgatcctagatcaggacgagaagaccaagaagcctctc
gttcaggtgcacaggaacctggtgacgaggctgaagcctcaccaggtggacggtgtccag
tttatttgggacagttgttgtgagtctgtgaagaaggccaactcctctcctggatcaggc
tgcatactggcacactgcatgggcctgggaaagactctgcagatggtaactttcctccac
acggtgctgctgtcagagaacctcaaattcagaacggccctggtcgtgtgtccacttaac
accatcctcaactgggtcagcgagttcaagaaatggcaaagcaacatgggacaggataaa
gtaacggtcacagagctggctacaataaagcatcctccagaacgaatcagggctctgcag
aggtggaagagagaaggaggtgtgatgatcatgggctatgagatgtaccgcatcctgtca
ctagccaagaaaatcaatgacgagaagtgcaagaaggagttaaagagcatactggtggat
ccaggtccagactttgcggtttgtgacgagggacacatcttgcgcaacgaagcatccaat
atctccaaatctatgaatgccatcaagacccaacggagagtggtgctaacgggcacgcca
ctacaaaacaacctgaatgagtaccactgcatggtcaatttcatcaagaagaatctactg
ggctcattgggggaattccgaaaccgctttatcaaccccattcagaacggccagtgtgct
gactccacgtcaagagacgtccgaatcatgaagaaccgagcacacgtacttcatgccatg
ttggctggatgcgtacagagaagagattactcagagttgactcagtttctgcctcccaaa
cacgagtacgtgctggcagtgaggctttcccctcaccagtacaagctgtatcgctactac
cttgacaacgtcacgggtatgggctccgtgactaacagagcaaaagcgagggttggagcg
aacctgttcaaggactttcaggtgctcagtcgaatttggactcatccctggtgccttcag
ctcagctacatcagcagggaaaaaaagggatattttataaagaggaataaaaataaagcg
tcaactctgctgagaaatgaagacgctgctgtggctgagagtggactcagagcgatcgaa
ggagcagaagggaatatcaatgccagcagtacagcgggtaatgttggtgtgtccaatggc
gctccagcagtggaaggagagaaaacaaccgtcagcgcaaggtctcagaatcaagatgag
ggctggttcaagaacctgctgtctgaagaagacgccaaaatcctggcgcactcggggaag
atggtgctcttgtttgagatcctcagaatggccgaagacctggaggacaaagtgctcgtg
ttcagtcagtcgttgatctcattagacctaattgaggatttcctcaaggcgtcccaccat
gccagaaacccatcgtcattcaaagcgggcagctggattagaaacattgattactatcgt
cttgacggctccaccagtgctgtgttgaggaagaaatgggcagatcagtttaacaatgcc
accaatgttcgtggccgattgtttctcatttcaacgagagccggctcactgggcatcaac
ctcgttgctgccaacagggtcatcatctttgacgcctcatggaatccctcgtatgacata
cagagcatatacagggtgtaccgcttcggtcagctgaaacaagtgttcgtgtaccgcttc
ttggctcagggaacctatggaggagaagatctatga
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integrated database retrieval system
