Cottoperca gobio: 115019455
Help
Entry
115019455 CDS
T07513
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115019455 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115019455 (rnf43)
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115019455 (rnf43)
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115019455 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8_fungal
zf-C3HC4_3
FANCL_C
Motif
Other DBs
NCBI-GeneID:
115019455
NCBI-ProteinID:
XP_029304890
UniProt:
A0A6J2R699
LinkDB
All DBs
Position
14:6181745..6269195
Genome browser
AA seq
817 aa
AA seq
DB search
MTVPQRRLAGLWPWLLMAALQVVLGQPGLESERPALRAVIKVALLNHEPTGKPITLEGVF
VGGSAGYAEGKLMQYHPLSLCNTSEDERQENDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRDTDSLPRPVVLVEAEHAEELMGLVNKNEEAKVRIDILVEPP
RWPHYDVGILLTIVLAILSIVLIFAFRYKCKSNRTWDSVHQQTMRAISRLETKAYSSQGC
SGSQRQRAAWGSASSSNSSPVCAICLEDFLDGQHLRIISCAHEFHKECVDPWLLQHRTCP
LCMHNIMGTERQPQRNRLQQNPEQSQGFLHPQPYSNPHNHPFPQHAIPFSMRPHYPRGPS
GPYPSLGHYTGSSPVDAQTLRFLTSRPLATACGYHLSSEGPGRPHRIGGNCRTSTHHYTP
RRPCHNYRSSCPAQRSASSSRLHHTASATQQPRGAPVHSRQDDGSCSGGSYHTERSGYLA
DGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGPGRAP
RRNSLEAGAQARPRSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHSQGPSRGS
DEEQGAAAAAAPAALVLDKDSPVCPPKHSPCQCPKPEPTDRPSPGAECQDNVPSSPTGPP
VLVSPIPLQLQPHCCHQGHGHPPAPLGRVGGCVLDGPSVRFHQSLDLQDDRSIHIHYGQG
PGFCCSPPELHPALLPVPLILDSGGMEDWPCYAGAHVVWQKRVQQARSEPQLLGPGTSMD
RPPCRFHHGPAADRNTDICLYCQTLHHNQGSEEESGV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcggccggccctccgagcggtcatc
aaggtggcactgctgaatcacgagccgacgggaaagcccatcactctggaaggggtgttc
gtgggaggaagtgccggctacgcggagggaaaactaatgcagtatcaccctctgtctctg
tgtaacacaagcgaggatgaacggcaagagaatgacttcatcaccattgtcaaactggag
cacagggtaccccgctgtctgccgctgctcgataaggctcgcatggcattggacaaagga
gctcaggctgtaatctttgatgtcagtgatgatgccaatgctgctgcggagctgcgagac
acagactcccttccccgtccagtcgtgctggtggaggcggagcatgccgaggagttgatg
ggtttggtcaacaagaacgaggaggccaaagttcgtattgatatcctggtggagccgccc
agatggccacactacgatgtgggtatcctgctcaccatcgtcctagctattctgtccatc
gtcctaatcttcgctttccgctacaagtgcaagtccaacaggacctgggactctgtccat
cagcagaccatgcgggcgattagtcgattggagaccaaagcctacagctcgcagggctgc
tcgggctctcagcgccaacgcgcggcctgggggtcagccagcagctccaactcgagcccc
gtctgtgccatctgccttgaggacttcctggacgggcagcatctgaggatcatctcctgt
gctcatgagttccacaaagagtgcgtcgacccctggctgctgcagcaccgcacctgtcct
ctgtgcatgcacaacatcatggggacagagcggcagccccagaggaacagactgcagcag
aatccagagcaaagccagggtttcctgcaccctcagccttacagcaatccacacaaccac
cccttcccccagcacgccatccccttctctatgaggccccactatcctcgtggaccctct
ggaccttacccctctctgggccactacactggctcttctcccgtggacgcccaaacacta
cgtttcctcaccagcaggccgcttgccaccgcctgtgggtaccacctttcttcggagggt
ccggggaggccccacaggatcggaggtaactgcaggacttccacccaccactacacccct
cgtcggccctgccacaactatcgctcatcctgcccggcccagcgcagtgcatccagctcc
agactgcaccacaccgcctctgctacacaacagccccgcggagcgccggtccacagccgg
caggatgacggcagctgctcgggtggcagctaccacacagaacgcagcggatacttagct
gatggaccagcgagtgactccagctcggggccatgccatggctcctccagcgactcagtc
ctcaactgtactgacgtgtccctgcagggggtttatggcagctggtccaccttccgtagc
tctctgagcagtgactatgatccgtttgtgtattatgggccaggtcctgggcgcgccccc
cgcaggaacagcctggaggcaggtgcccaggcccggcccaggtctctggattctgtggtg
aacaaggcgggctgccccgaagagcagccacagactgtgttcagccacatccactaccac
cgccacagacaccaccactatgaggagggggagcacagtcagggcccgagcagaggctcg
gacgaggagcagggggccgctgctgcggctgctcctgctgctcttgttctggacaaagac
tcgcctgtgtgccctcctaagcacagtccctgccagtgtccaaagccagagcccacagac
cggcccagtcctggggcagagtgtcaggacaatgtccccagcagccctacaggacctcca
gtcctggtgtccccaatccctttacagcttcagccccactgctgccaccagggacacgga
caccctcccgctcctcttgggcgagtgggtggctgcgtgctcgatggcccctcagttcgc
ttccaccagagcctagatctgcaggatgaccggagcatccacatccactacggtcagggc
ccgggcttctgctgctctcctcctgagctgcaccccgcattgctccccgtgcctctcatt
ctggactctggaggtatggaggactggccgtgctatgccggggcccatgttgtgtggcaa
aagcgggtgcagcaggcccgctcagagccccagctcttgggtcctggaacctctatggac
aggcctccctgcaggttccaccacggccctgctgctgaccgcaacacagacatttgtttg
tactgccaaacattacaccacaatcagggatcagaagaggagtctggtgtgtga
DBGET
integrated database retrieval system
