Cottoperca gobio: 115019652
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Entry
115019652 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115019652
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
115019652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
115019652
NCBI-ProteinID:
XP_029304974
UniProt:
A0A6J2R3T3
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Position
2:complement(7019097..7032870)
Genome browser
AA seq
952 aa
AA seq
DB search
MGQKDHVEAGAAHILDLGLDLEYLHVAGADRQAGGSDGRPAMEEQGESSGNSSTANSPPP
AVEEENAGSDAECEPASSSSDTPAAAPDPDGGEGGLTHCKNTHQLLCRTQCVDLGTEGPP
EPPPELPSELENDTPAQSSPSSPCKQPPEPPSTPSSSEPAPEAGGKEYQAKLEFALKLGY
SEETVRLVLSKLGPDTLINDILGELVKLGTKSDSEQPVGSLASTSSSSSSSSSCGCSDLM
ESQRSDSPCPSESLCDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDI
TVFVPAWRKEQSRPDAPITDQDILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYE
SDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKR
PVMPEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVTTKNQGDTGL
VKSHSVPAGSIDAKKGAQKRQSDPSIRALSYSDAEEKLARGRAESQKNSMCGSSCSSGSI
TMSTAPGGPPSSFSLQQDQQSRAVTPHSLPAPSHDLYPHCESPDLSYYSVTRAYSGLSLS
TRRSPDCRFPNDTDLRLGSMGSAGSECGSESSVSCGSSCDSYSERPCPGCPQDTLLEDNV
HFANPHSRLYPHHAPTNHELCGLHPADYTNIQHSHTSNTHSYHLARGQSCSHDQPPPEAP
PKRPLYPLPPHLQHQPLTARSSCPGDYHSLPQSNPHPPGSPLGRCLAPTRAESVSDSHLY
EHLSTSHHHHRTKALPSWDTYYRQPPLPPSRYEPSAYQSLPDTRQSSWHAPPWTQDAYAQ
HHSSHPALHPSSTHYLNHPPHPPHPSSTPLQPYPPHSARLTVPSHAPPSYMPQHPESPAH
SRYGDMREKVYVNLCNIFPSELVSRVMARSPHITDPQQLAAAILAEKAQSGY
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcaggtgcagcccacatcctcgacctggggctggat
ttggagtatctccacgtagcaggggctgaccggcaggctggcggctctgacgggcgccct
gctatggaggagcagggggagagctccggcaacagcagcaccgccaattcccctccgccg
gccgtggaggaggaaaatgccgggtctgatgcagagtgcgagccggcgtcctcttctagc
gacacccccgctgccgcccccgacccggatggaggtgagggagggttaactcactgtaag
aacacccaccagctgctttgtcggacccagtgtgtggatttaggcactgagggtcctccc
gagcccccacctgaactcccatcagagcttgaaaacgacacccctgcccagtcttcaccc
agctccccatgtaagcagccacctgagcctccgtccactccctcctcatcagagccggcg
cccgaagccggcgggaaggagtaccaggctaagctggagttcgccctgaagcttggctac
tctgaggagacggtgcgactggtgctgtccaagctcggccctgacaccctcatcaacgac
atactgggagagctggtcaaactgggcaccaagtcagacagtgagcagccggttggatcg
ttagcctctacctcatcttcttcgtcctcctcctcctcgtgtggctgttctgatttgatg
gagagccagaggtcggactccccctgtccgtcagagtctctgtgcgaccaggacaacctg
cggccaattgtggtggatggcagtaatgtagccatgagccatggcaacaaggaagtgttt
tcctgccagggcattcagctggcggtagattggttcctcgagcgtggccatcatgacatc
acagtgtttgtgcctgcgtggaggaaagagcagtcccgccctgacgcccctataacagat
caggatatcttgcggcgcctggagaaggaaaagatcctggtcttcactccttcgcggcgt
gtccaaggtcggcgcgtggtttgctatgacgaccgcttcatcgtcaaactggcctatgag
tcagacggcatcatcgtctctaatgataactacagagacctggctaatgagaagccagag
tggaagaagttcatcgacgagcggctgctcatgtattcctttgtcaatgacaaattcatg
cccccagatgaccctcttggtcgtcatggccccagcttagacaacttcctgaggaaaaga
cctgtcatgcctgagcagaagaaacaaccttgcccatacggaaagaagtgcacttacggc
cacaagtgtaagtactaccacccagagagaggtgctcagcctcagcgtgctgtggctgat
gaactgcgtgccagtgccaagacttgcgtcaccacaaagaaccagggggacaccgggttg
gtgaagagccacagtgtgccagctggcagcatcgatgcaaaaaaaggcgcgcagaaaagg
cagtcagacccgagcatcagagcgctgtcgtacagtgatgctgaggagaagctggcaaga
ggtagggcggaaagccagaagaacagtatgtgtggcagcagctgtagcagtgggagtata
accatgtccacagccccaggaggccctccatccagtttcagccttcagcaggaccagcag
tccagagcggtgactcctcatagcctcccagcccccagccatgacctttaccctcactgt
gagtctccagacttgagctactactcagtaacgcgtgcgtactctggcctgagcctgtcc
accagacggagcccagactgccgcttccccaatgacacagacctgcggctgggctcaatg
ggctcagcgggctccgagtgcggcagcgaaagcagcgtgagttgcgggagcagctgcgac
tcgtacagcgagaggccgtgtcccggatgcccccaagacaccttactggaagacaacgtc
cattttgctaatcctcacagccgactgtatccccatcatgccccgacgaaccatgaactg
tgtggccttcatcctgccgattacacaaatatccaacacagccacacgtctaatacacac
agctaccacctggcacgcgggcagagctgttctcacgaccagcctccaccagaggctccc
cctaagcgccctctctaccccttgccccctcacctccagcaccagccgctgactgcacgc
tccagctgcccaggcgactatcactctctgccccagtcaaatcctcacccccccggctct
cccctcggccgctgcctggcccccacacgagcagaaagtgtgtcagactcgcatctgtat
gaacacctctctacatcgcaccatcaccaccggacaaaagcgctgcccagctgggacacg
tactacagacagcctccattgccgccgtccaggtatgagccgtcggcctatcaaagcctg
ccagacacacgccagtcctcctggcacgcccctccctggacacaggacgcctacgcccag
caccactcctcccacccagcgctccacccgtcctcgacacattacttgaaccacccgcct
catccacctcatccatccagcactcctctccagccgtacccgcctcacagcgctcgcctt
actgtcccctcccacgctccaccctcctacatgccgcagcacccagaatcccctgcacac
agccgctacggggacatgagggagaaagtgtacgtcaacctgtgtaacatcttcccctcg
gagctggtgagccgggtgatggccaggagcccccacatcacagacccccagcagctggca
gccgctatacttgcagagaaagcccaatcgggctactga
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