Cottoperca gobio: 115019703
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Entry
115019703 CDS
T07513
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115019703 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115019703 (pnpt1)
03016 Transfer RNA biogenesis [BR:
cgob03016
]
115019703 (pnpt1)
Enzymes [BR:
cgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
115019703 (pnpt1)
Messenger RNA biogenesis [BR:
cgob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
115019703 (pnpt1)
Transfer RNA biogenesis [BR:
cgob03016
]
Prokaryotic type
tRNA degradation factors
115019703 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
115019703
NCBI-ProteinID:
XP_029305075
Ensembl:
ENSCGOG00000023026
UniProt:
A0A6J2R6S8
LinkDB
All DBs
Position
15:complement(19529334..19536432)
Genome browser
AA seq
770 aa
AA seq
DB search
MRYLLRVGHSFSRLHVRLCHQSVYNNNAHQRRLVVDLGEKKLEISTGRFARFADGSAVVK
LGETSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNHLRRELGITDNEILTSRLV
DRSIRPLFPSGYFYDTQILCNLLAVDGVNDPDVLAINAASAALALSDIPWNGPIGAVRVG
MVDGQMLINPTRAEMTSSSLNLIVAGAPSSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IILAIQQLVREQKVTKRTPAKIFSAPTIVVEHVRQLASHKIYAVFTDYTHDKISRDEAIN
KVRLETEENVKERFPEAEPFEVIESFNTVSKEVFRNLVLNEYKRCDGRELTALRNISCDV
DLFKPLHGSALFQRGQTQVLCSVTFDSLESSIKADIITTALSGVKSKNFMLHYEFPPYAT
NEIGKMGGSNRRELGHGALAEKALRSIIPKDFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAVGLISKPNPEKPTEIQDYRLLTDILGIEDYLGDMDFKLAGTSKG
ITALQVDMKIPGLPLKVVMEAIQQATVAKREILSIMNKCTAKPRETRKANGPVVENVRVP
VSRRAHFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMNEAQEFISDICKDDQE
QQLEFGAIYTATIIEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIRHPSALGLEVGQEIQV
KYFGRDPTDGRMRLSRKVLQSPAATVVKTMSEKQSISMDPSNSQTTATDL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatttgctccgggtggggcactcgttttcccgccttcatgtccgtttatgtcac
caaagtgtttacaacaacaatgcacatcaacgaagactggtggtggaccttggggagaag
aaacttgagatctctaccgggaggtttgctagatttgctgatgggtctgctgtggtaaag
ctgggagaaacctctgtgatggtgactgccgtgagcaaaaccaaaccatctccgtctcag
ttcatgcctcttgtggtggactacagacagaaagcagctgctgcaggtcgaatccccacg
aaccatttgaggcgagagctgggcatcacggacaatgagatcctcaccagcagactcgtg
gacagatcgattcgaccgctgttcccttctggttacttctatgatactcagatcctttgc
aacctactggcagttgatggtgtcaacgatccagatgttctggctattaatgcagcttcc
gctgctcttgccctgtctgacatcccctggaatggacccataggggctgtgcgtgtgggc
atggtggatggacagatgctgatcaaccccacaagggcagagatgacttccagcagtctt
aacctgattgtggccggagcccccagcagtcaagtggtgatgattgaggcgtcggctgag
aacgtgctgcagcaggacttttgccatgcagtcaaggtgggagtcaaacacacccagcag
atcatactagccatccagcagctggtgcgagaacagaaggtcaccaagcgcacccccgcc
aagatcttctcagccccgactattgtggtggagcatgttcggcaattagcctcacataag
atttacgctgttttcaccgattacactcacgataagatttcaagagatgaagccatcaac
aaagtccgactagaaactgaagagaacgttaaagaacgattccctgaggcggagcccttt
gaagtcattgaatccttcaacactgtgagcaaagaagtcttccgcaatttagtgcttaat
gagtacaagagatgtgacgggagggagttgactgctctaaggaacatttcttgcgatgtg
gacctcttcaaaccgctgcacggctcggctctgttccagagaggacaaacacaggtgctc
tgcagtgtcacgtttgattccctggaatccagtatcaaagcagatattatcaccacagct
ttaagcggcgtcaaatccaaaaacttcatgcttcattatgagttccctccatatgcaact
aatgagattggaaagatgggaggcagcaacaggagagagcttggacatggggctctggct
gagaaagctctgagatcaatcattcctaaagacttcccgttcactatccgggtcacagct
gaggtgctggagtcaaatggatcctcctcaatggcttcagcatgtggaggcagccttgct
ctcatggacgcaggtgtgcccatctcctctgctgtggcaggtgtagcagtcggcctcatc
tccaagcccaacccagagaaacccactgagatccaagactacagactactaacggatatt
ctggggatagaggattacctcggagacatggacttcaaattggcaggaacaagcaagggc
atcaccgctttacaggtggacatgaagatcccaggtttgcctctgaaggtggtcatggag
gcgatccaacaggccacagtggcgaagagggaaatcttgagtatcatgaacaaatgtacg
gcgaaaccaagagagacgaggaaagcgaacggacctgttgtcgaaaatgtccgggtgcct
gtttccagacgagcacactttgttggtccgggcggctacaacctccgcaggctacaagct
caaacaggtgtgacaataagtcaggtggacgaggagactttctctgtgttcgctccaaca
ccaggagccatgaacgaagcccaagaattcatcagcgacatctgcaaagatgatcaagaa
cagcagctggagtttggcgctatctacactgccaccatcattgagataagggacattggt
gtgatggtgaaactttatcccaacatgagtgctgtcctgctgcacaactcacaactggac
cacaaacggatccgacatcctagtgctctgggtttagaggtggggcaggagatacaggtc
aaatactttggacgggacccaacagacggcagaatgagactttctcggaaggtgctccag
tctcctgctgcaactgtcgtcaagacaatgagtgagaaacagagcatctccatggacccg
agcaacagccagacgaccgccaccgatttgtga
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