Cottoperca gobio: 115019917
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Entry
115019917 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
cgob
Cottoperca gobio
Pathway
cgob04145
Phagosome
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115019917
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115019917
09144 Cellular community - eukaryotes
04510 Focal adhesion
115019917
09142 Cell motility
04820 Cytoskeleton in muscle cells
115019917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115019917
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115019917
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115019917
Membrane trafficking [BR:
cgob04131
]
Endocytosis
Phagocytosis
Opsonins
115019917
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115019917
Exosomal proteins of colorectal cancer cells
115019917
Exosomal proteins of bladder cancer cells
115019917
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115019917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_CFP_C
TSP1_ADAMTS
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
115019917
NCBI-ProteinID:
XP_029305490
Ensembl:
ENSCGOG00000015057
UniProt:
A0A6J2R816
LinkDB
All DBs
Position
15:11268482..11283940
Genome browser
AA seq
1074 aa
AA seq
DB search
MAXRQFEIVSNGRANTLDLVYWVDGSQNVVSFEDVDLSDSQWKNIHTSCSWENANLFVGC
SLIDSFLLDEPFYEHLQAEGSRMYVAKGSTRENHFRGLLQNVRFIFDTAVEDILLSKDCE
VTKQDVANIVSESTEIVDVSPSITTNIIGQKTDDVVTDMCERSCEELSTMFQELKGLRFV
VSNLIDGLQKVTEENTVMKEALGKMKKEKEKNMCWQDGRLFEDKEDWVVDSCTKCSCQES
KIVCHQITCPPVACASPSFIDGECCPVCLPQTSDDGWSLWSEWTECTVTCGTGTQQRGRS
CDATSNPCTGASIQTRKCSLSRCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNAP
VPQLGGTDCEGNGRETQRCTAKPCPIDGGWGPWSPWATCSATCNGGVKSRTRVCNSPQPQ
YSGKNCIGEANDSDSCNKKHCPIDGCLSNPCFGGVDCNSSPDGSWECGPCPAGFRGNGTH
CEDINECDMVSDVCYKVSGLQRCVNTDPGFHCLPCPMRYKGTQPFGMGVEAAKKNKQVCE
PENPCKDKTHNCHKYAECIYISHFSDPMYKCECRTGYAGDGFICGEDSDLDGWPNQNLVC
GANATYHCKKDNCPSLPNSGQEDFDKDGQGDACDKDDDNDGIIDERDNCPLLYNPRQFDF
DKDEVGDRCDNCPYEHNPAQIDTDHNGEGDACAIDIDGDEILNEVDNCPYVYNTEQKDTD
MDGVGDQCDNCPLLHNPDQTDVDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANSNQVDH
DKDGKGDACDYDDDDDGIPDDRDNCRLTPNTDQLDSDGDGRGDVCKDDFDNDNIPDIIDV
CPENNAISFTDFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNA
VDFSGTMYVNTDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKV
VNSTTGTGENLRNALWHTGNTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVV
YEGKQIMADSGPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKPELPTVFTR
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggccnggcggcagtttgagattgtgtccaatggacgtgccaacactttggacctggtt
tactgggtggacggctcccagaacgtggtttcattcgaggatgtggacctgtctgactca
cagtggaagaatattcacacttcatgttcatgggaaaatgcaaacctgtttgtgggctgc
agcctgatcgacagcttcctcctggatgagcctttctacgagcacctgcaggctgaggga
agccgcatgtatgttgcaaagggatccactcgggagaaccacttcaggggccttctgcag
aatgtgcgtttcatctttgacaccgcagtggaagacatcctgctgagcaaagactgcgag
gtcactaaacaagatgttgccaatattgtgagcgagagcacagaaattgtggatgtgagt
ccctccatcacgacaaacattatcggccagaagacagacgatgtggtgacagatatgtgc
gagcgctcttgcgaggaacttagcaccatgttccaggaactcaaaggcctgcgttttgtc
gtcagcaacctaattgatggcttgcaaaaagtgacagaggagaacacggtcatgaaggag
gcccttgggaagatgaagaaggagaaagagaaaaacatgtgctggcaggatgggcgcctc
ttcgaagataaggaagactgggttgtagacagctgcaccaagtgttcctgccaggagtcc
aagatcgtgtgtcaccaaattacatgccccccagtggcttgtgccagcccatcatttatc
gacggcgagtgctgccccgtgtgtttgcctcaaaccagcgatgatggctggtccctctgg
tcagagtggacagagtgcacagtcacctgcgggacaggaactcaacagaggggtcggtca
tgtgatgcaacaagcaacccctgcaccggagcttctattcagacccgcaagtgcagcctg
agcagatgtgacagccgtgttcgccaggacggagggtggagtttgtggtcgccgtggtcg
tcctgctcagtgacctgtggagaaggacagataaccaggatacgacactgcaacgctcct
gttccacaactggggggtacagactgcgagggaaatgggagagagactcagcgttgcact
gccaagccctgtccaattgatggtggttggggtccttggtctccatgggcaacctgttca
gcaacatgcaatgggggagtcaaaagtcggacgcgtgtgtgcaacagccctcaacctcag
tacagcggcaagaactgtatcggggaggctaacgacagtgacagctgtaacaaaaaacac
tgtcctattgatggctgtctgtctaatccctgctttgggggagtagattgcaacagctct
ccagatggatcctgggagtgcggcccatgccctgctggtttccgtggaaatggtacccac
tgtgaagacatcaatgagtgtgacatggtgtctgacgtttgctacaaagtgagtggattg
cagcgctgcgtcaacacagatccaggtttccactgtctgccctgtccgatgcgttacaag
ggcacccagcctttcggtatgggtgtggaggctgccaagaagaataaacaggtgtgtgaa
ccagagaacccatgcaaggacaaaacccacaactgtcacaaatatgccgaatgcatctac
atcagccacttcagtgaccctatgtacaagtgtgagtgcaggaccggttacgctggagat
ggcttcatttgtggagaagactcggacttggatggctggcccaatcagaaccttgtgtgt
ggtgccaacgccacatatcactgcaagaaggacaactgccccagccttcccaactctggg
caagaagactttgacaaagacggtcaaggagatgcttgtgacaaggatgacgacaatgat
ggaattattgacgagagggacaactgccccctcctttacaatcctcgtcagtttgacttt
gacaaggatgaagttggcgaccgctgtgataactgtccctatgaacacaaccctgctcaa
atagacaccgaccacaacggagaaggggacgcctgcgccatagacattgatggagatgaa
attctgaatgaggttgacaactgcccctatgtgtacaacactgagcagaaggacactgac
atggatggagttggtgaccagtgtgacaactgtccattgttgcacaaccctgaccagact
gacgtagacaatgacctggttggagatcagtgtgacaataaccaggacatcgatgaagac
ggccatcagaacaacctggacaactgtccctatgtggccaactccaaccaggttgaccat
gacaaggatggcaaaggagacgcatgtgactatgatgatgatgatgatggtatacctgac
gacagggacaactgcagactgacacccaacacagaccagctggactctgatggcgatgga
agaggggatgtctgcaaagatgactttgacaacgacaatattccagatattattgacgtg
tgtccggagaacaatgccatcagtttcacagacttcaggaagttccagatggtccacttg
gatcctaagggaaccactcaaatcgatcccaactgggtggtcagacaccagggcaaagag
ctggttcagactgccaactctgacccaggcattgcagttggttttgatgagttcaatgct
gtggacttcagtggaacaatgtacgtgaacacggacagagatgatgactatgcaggcttt
gtgttcggctaccagtcgagtggccgtttttatgtcgtgatgtggaagcagatcacgcag
acttactgggaggacaagccctccaaggccttcggcatctctggcgtttcactcaaagtc
gtcaactcgaccactggcactggtgaaaacctcaggaatgctttgtggcacacgggcaac
actgctggacaggtgcggactctgtggcatgatcccaaaaacattggttggaaggattac
acagcttacaggtggcatctcatccacagaccaaagactgggtttataagggttgtggtc
tatgaaggtaaacagatcatggctgactcaggaccagtttatgacaagacgtttgccgga
ggaaggttaggcttgtttgtcttctcacaagagctggtgttcttctccgacctcaagtat
gagtgcagagataagccggagttgccaacagtgttcacaagataa
DBGET
integrated database retrieval system
