Cottoperca gobio: 115020018
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Entry
115020018 CDS
T07513
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115020018 (hps1)
Membrane trafficking [BR:
cgob04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
115020018 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
DNA_pol_phi
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
115020018
NCBI-ProteinID:
XP_029305703
Ensembl:
ENSCGOG00000014792
UniProt:
A0A6J2R619
LinkDB
All DBs
Position
15:complement(13419730..13428633)
Genome browser
AA seq
698 aa
AA seq
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MKCLLISSESAEVLFHWTDPEFQQNVQEQYGASQEDGQGLPAFEDSISTLFAPIIISCST
MVDRLGDSYTSFTTENNHIYVLHQFDECLYIAVNGDGEEDEGDLRRKIYVMKKMIEVMFG
MVTLSSSLLRKELRPQDTEQRARLWKHLQSLLETYSHLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSVERAGEEVLHAFILVHTKLLAFYSSRNASTLSTSDLLALIIMA
QNMYPSNIDLDDSNPEDIDSTSGSGPESFYTPEPSPRDGDSSSSADMPVRGSTPVFEFVD
PDVQMAEDSLHTLDVPPPDPSTPRRVFLEVSLKDGLYPMMPHSMYCLPLWPGITLVLLTK
IPTSAVAMSVYTFLEAFAKLEKRLSEGMEGSAATRGQPTIHDVRNKLDKFIKALGPSEMK
CTQLQHVWTEFKSRIARGGSGFNRDLIQSCKNMKTQLCGIYRQCFLIESGPADIPRRLSP
GLQERAQTMVQDKLMDWKDFLLVKSKRNITMVSYPVSKLILLPVMSSFNLTYLEDFPGLI
HFICVDRSTGQMIAPSLNITERNTSELGKGPLAHFIKSKVWSLVSTTRRYLQKGYSTVTL
RDGDFYFCYFLWFENETGYKLEAGDIPVLPDDSAPIGMLAWDYYRKLLRYYSKNHQGEVV
KCYELLTVHLGVIPTEVILQHCRQLASKLWEPSRNPLL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttactgatatccagtgagagcgccgaggtcctcttccactggaccgaccca
gaatttcagcagaatgtccaggagcagtacggggcgtcccaagaggatggccaggggctt
ccagccttcgaggacagcatcagcactctgtttgctcccatcatcatctcctgcagcacc
atggtggacaggctgggggacagctacacctccttcaccacagaaaacaaccatatctac
gtcctacaccagttcgacgagtgtctctacattgctgtgaatggagacggggaagaggac
gagggagatctgaggaggaagatctacgtgatgaagaagatgattgaggttatgtttggc
atggtcaccctcagcagtagcctcctcaggaaagaactgcgtcctcaggacacggagcag
agagcgaggctgtggaagcatctccagagtctgctggagacatacagccacctcagagag
aacgaccagagcttcttagtggaggcggtggagaggctgatccaccccacgctatgtgag
cagtgcattgagttcctggagcgccgtttagttcagcagctcaacagcagtgtggagaga
gcaggagaggaagtgctgcacgccttcatcctggttcacaccaaactgctcgccttctac
tccagccgcaatgcgagcacgctctccacctcagacctcctcgccctcatcatcatggca
cagaatatgtatcctagcaacatagacctggatgattctaatcctgaggatattgatagt
acatccggttctggtcctgaaagtttttacactccagagccctcccctagagacggggac
tcaagcagttcagcagacatgccagtgagagggagcactcctgtgtttgagtttgtggac
ccagacgtccagatggcagaggacagcttgcacactctggatgttcctccacctgaccct
tcgacccctcgcagagtcttcttagaggtctcactcaaagatgggctgtatcccatgatg
cctcactccatgtactgtctgcctttgtggccgggcatcacacttgtactgctaactaag
attcccaccagtgcagtggccatgtcagtgtatacatttttggaggccttcgccaaactg
gagaagcgtttaagtgaaggcatggaaggatctgctgctactagaggccagccgactata
cacgacgtccgcaacaaactggataaattcattaaagccttagggcctagtgagatgaag
tgtacacagttacaacatgtctggacagagttcaagagccgaatcgcccgaggaggttct
ggattcaacagagacctcatccaaagttgtaagaatatgaagacccagctgtgtggaata
taccggcagtgttttctcattgaatctggaccagccgacattcctcgacgtctctcgcct
ggtctgcaggaacgagcccagaccatggtgcaagacaaactgatggactggaaggacttc
ttactggtgaaaagcaagaggaatataaccatggtgtcatatcctgttagcaaactaatc
ctgctccctgtgatgtcaagttttaatctcacttacctggaggatttcccaggcctcatc
cactttatctgcgtggaccgatccaccggccaaatgattgcgccgtcactcaacatcact
gaacgcaacacgtcggagctggggaagggaccactggctcacttcatcaaaagcaaggtg
tggagcctggtcagcacaacgcgccgctatctccagaagggttactccacggtcacattg
cgcgacggagacttctacttctgctacttcctctggtttgaaaatgaaactggctacaag
ttagaggcaggggacatacccgttctacctgatgactctgcccccattgggatgcttgcc
tgggattactacaggaagctgctgcggtactacagcaagaatcaccagggtgaggtggtg
aagtgttacgagctgctgacagttcacctgggggtcatccccactgaggtcatcctccag
cactgcagacagctggcaagcaaactgtgggagccttcccgcaatcctctgctgtag
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