KEGG   Cottoperca gobio: 115020071
Entry
115020071         CDS       T07513                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
cgob  Cottoperca gobio
Pathway
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04518  Integrin signaling
cgob04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115020071
   04518 Integrin signaling
    115020071
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115020071
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115020071
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cgob00535]
    115020071
Proteoglycans [BR:cgob00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   115020071
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 115020071
NCBI-ProteinID: XP_029305809
UniProt: A0A6J2R6B0
LinkDB
Position
15:11442895..11456847
AA seq 674 aa
MAQVPSVRGPLLVLLLQLVLICSAQRSQGPTGPGGVPGIDGIAGERGEDGDEGLSGPDGD
EGKPGSSGLPGIPGNDGLTGPFGDPGPDGPLGQKGEPGLSGPRGAAGVGPDGPPGPPGPG
GLLGEVGKVGPLGSIGVRGPQGPRGPTGSRGAAGMQGSADLCPNSCPPGTSGHPGLPGMK
GHKGVKGEVGEPGKQGHKGEEGDQGGLGEVGSQGPMGPQGIRGAMGMIGHKGDLGARGLG
GDPGPQGVSGATGDRGQRGVMGELGPQGETGVLGPRGITGVPGPKGDAGLSGVDGREGIP
GMPGAKGGFGKSGVPGEVGLQGLPGLPGVPGQKGLSGIKGDDGQPGLPGTLGPAGKAGER
GEQGELGPVGPIGEPGAIGVKGPLGSAGKPGGRGPKGDPGLPGLPGPHGLPGVKGERAER
GEGGPKGEQGAQGDEGNPGDKGAIGDSGEYGAKGELGNLGDTGKKGPEGSRGQPGIEGPP
GTPGPRGMQGNRGPPGVRGSQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRRPESGVA
GLPGKPGPPGSPGTPGDNGFPGQGGARGLPGLKGPQGIIGVKGPKGELGDRGSRGPTARG
PKGQPGSPGLPGEPGKPGYGQDGRDGQRGPPGIHGQSGVPGPPGAAGPNGYCDPSSCNLQ
AGAQLVDVKGPAGN
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggctcaggtccccagcgttagagggccacttttggttctgcttctgcagcttgtcctt
atctgctccgctcaaaggagccaaggccctactggacctggaggtgtcccaggaattgat
ggcattgcaggagaaagaggagaagatggcgatgagggactttctggacctgatggagat
gaaggtaaacctggctcttcaggattacctggaatccctggaaatgatggtttgaccggc
ccttttggagatccagggcccgatggtccccttggacagaaaggtgaacctggactatct
ggacctcgtggagcagctggtgttgggccagacggaccccccggaccacccgggcctgga
ggacttttgggtgaagtgggaaaagttggaccacttgggtctataggtgtgagagggcct
cagggaccccgtggaccaactgggtccagaggtgcagctggaatgcaaggcagtgccgac
ctgtgtccaaactcttgtccacctgggacctctggacaccctggccttcctggcatgaag
ggccacaaaggtgtaaaaggtgaagtcggagaacctgggaagcaagggcacaagggtgag
gagggagaccagggaggcctaggagaggtcggatcccaaggaccaatgggtcctcaggga
attcgtggagccatgggaatgatcggccacaagggagatttgggagctcgaggtcttggt
ggagatccaggtccccagggtgtttcaggggcaactggggatcgaggccagagaggtgtg
atgggcgagcttgggcctcaaggcgaaacgggtgttctagggccgagaggaatcacaggt
gttccaggtcccaagggagacgctggtttgtctggtgtggacggtcgcgaaggtattcct
gggatgccgggagcaaagggaggctttgggaagtcaggcgttcctggagaggtcggactt
caggggcttcctggtttgcctggtgtacctggacaaaaaggcttgagtggcattaaggga
gacgatggtcaaccaggcctccccggaacattgggacctgctggcaaagcaggtgagcgt
ggagaacagggagagctgggacctgttggacctattggtgaacctggagctataggtgtg
aaaggccccctaggttcagccggcaagccaggtggcaggggacccaaaggtgaccccggc
cttcctggtctcccgggtcctcatggcctgcctggtgtgaagggagagagggcagaacgt
ggagaaggaggacccaaaggagagcagggagcacaaggtgatgagggaaaccccggagac
aaaggggctatcggtgattcaggagaatatggagctaaaggagagctcggtaaccttggc
gacactggcaaaaaaggtccagagggaagtcgaggccagcctggcatcgaggggccgcct
ggcacacccggaccgcggggcatgcaggggaacaggggtccacctggagtcagagggtcc
cagggtcctgcgggtaaagagccaagcgatcagcacatcaaacaagtttgcatgcgcgtc
atgcaagaacagctggcacagttagctgctagcttaaggaggccagagtcgggtgtagct
ggtttacctggaaaacctggacctccaggatcgcctgggactccaggagacaatggcttc
ccagggcagggtggagcaagaggccttccgggactcaaagggccacaaggaattattgga
gtgaaaggaccaaaaggtgaattgggagacagaggctccagagggcccactgcgcgagga
cctaaaggtcagccaggatctcccggacttcctggtgagccaggcaagcctggctacggt
caggatggtcgggacgggcagagaggacctcctggtattcatggacagtccggtgtacct
gggcctcccggtgcagctggtcccaatggttattgcgacccgtcatcctgcaacctccag
gcaggagcccagctcgttgatgtgaagggacccgcagggaactaa

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