Cottoperca gobio: 115020774
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Entry
115020774 CDS
T07513
Symbol
pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115020774 (pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgob03009
]
115020774 (pop1)
03016 Transfer RNA biogenesis [BR:
cgob03016
]
115020774 (pop1)
03029 Mitochondrial biogenesis [BR:
cgob03029
]
115020774 (pop1)
Enzymes [BR:
cgob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
115020774 (pop1)
Ribosome biogenesis [BR:
cgob03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
115020774 (pop1)
Transfer RNA biogenesis [BR:
cgob03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
115020774 (pop1)
Mitochondrial biogenesis [BR:
cgob03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
115020774 (pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
115020774
NCBI-ProteinID:
XP_029306579
Ensembl:
ENSCGOG00000016303
UniProt:
A0A6J2R8H6
LinkDB
All DBs
Position
16:22139600..22150355
Genome browser
AA seq
990 aa
AA seq
DB search
MSAAKVKMRGKKMRNQPASVQYPSSPLNVEGSTQNGGDTPVTGGVGDEGPSNVPPTTERP
KNPHQRGGWVRGHQKDGGGYAKEMPKYITAGAFARARAAEVSTMLKAVTKTTGSCHVFGA
LPKHMRRRAMSHNTKRLPCRLRDVANRMREKSLQSGPKKKKEQAKSKSRKARRRHGNLLL
EFNRRQRKNVWLETHIWHAKRFHMVKKWGYCLGSRPTYKCYRPSYRAMSSHCLLQDLSYY
CCIELQGDEDKLLSSLSLLTSKETGPTFAAALCLSGRRQGSVVVYKAGQYPALPLGPVTF
LWRPRTQDSTHRQLWIWAHPSIKKDLLPELQTVCQCCEAVVPPVVPVVTPAEAVATLELE
PMPEKTPEAKQITGTKRKRSFKGASGPPAKKILGDGTRSPTTPVTWKSSSNGIVINDLTM
EIVRYRLIGPQSHSVLAETMEAATDCEEMNKSQPSPLWWPEHCQNKSKMNLHQQQADVFH
TLKGIYGTGELPSGTVLGLTVDDPRLTLPTKKVKALPCGKQAQEVDEEKWRELMLRGVPE
HCCQSYLWEQSVRDNVTDNKISEQELNRMRSEVLVPGSRLSPTPPQGRVPILLVQQPGKQ
VGHEMSSWGSGWDLLLPKGWGMAFWVPLVYRGVRIGGLNMSLKHSQNKAAPHFPHDYPDC
PAGVHFQEEQEAELLAKFKRRPPAKRTNYIKHGCLAPFCCPWQQLAEEWELILREGGEER
KGDCRSQSPTEADRVMEEEMTSQGDISVTKPPSRVTVLRNRKSLRLLSGWCRPTTSKGQR
PCRVAELPPLDRSAMTLFLTAHGMSLVWVRLSVLCKGKPELSAMVCVPTAEDLELLNKKP
CSSGPQEPPHRDHFKSRIRSRKKNPKKAAASSLSSDKTEGKDSDLPPASEPNPTTSEESK
SSPQFSTDLIFGLWPDPLPSVTSHCSRVTLGWVTHGDFSLSTGCGEALGFVSVPGFLNTL
FNQPKEHRGMFLLRNPTSLHYRFVKINIEV
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagctaaagtgaagatgcggggaaagaagatgagaaaccagcccgcaagtgtt
cagtatccgtcttctccgcttaatgtggagggcagcacacagaacggaggggacaccccg
gtcaccggtggagttggtgatgagggcccatctaacgtccctccaactacagaaaggccg
aagaacccccatcaacggggtggatgggtccgtggacaccagaaagatggtggaggctac
gccaaggagatgcccaagtacatcactgctggagcttttgcccgggccagggcggcagag
gtgagcacaatgctgaaagcagtcaccaagacaacgggcagctgtcatgtgtttggagcc
ctgcccaaacacatgaggagacgggccatgagccacaacaccaagcggctcccttgcaga
ctaagagacgtggccaacagaatgcgggagaagagcctccagtccggcccaaagaagaaa
aaggaacaggcaaagagcaagagccgcaaggcccgccgccggcacggcaacctgctgctg
gagttcaaccgccgccaaaggaagaacgtgtggctggagacgcacatttggcacgccaag
cgcttccacatggttaaaaaatggggctactgcctcgggagccgacccacatacaaatgc
taccggcctagctacagggcaatgagcagccactgtctgcttcaggacctttcttattac
tgctgcatagagctacagggagacgaagacaagctgctgtcttctctgtcactactcacc
agcaaggagaccggtcctacatttgctgcagcactgtgtctatcagggcgaagacagggc
agtgtggtggtgtacaaagcaggacagtaccctgcgctgcccctgggccctgtcactttc
ctttggagaccccgtacacaggactcaacccacaggcagctgtggatttgggctcatccc
agtattaaaaaggaccttcttcccgagttacaaactgtgtgccagtgttgtgaggccgta
gttcctccagttgttccagtcgtgacacctgctgaggctgttgccactctagaactggag
ccaatgcctgaaaagacccctgaggccaagcagataactggaaccaagagaaagcgatca
tttaagggtgccagtggacctcctgccaagaagatcctaggagatggaaccagatctccc
accactccggttacctggaagtccagctcaaatggaatagttataaatgatctcacgatg
gagattgtacgctatcgcctgattggaccacagtcccattctgttctggcagaaactatg
gaagcagctacagactgtgaagaaatgaataaatcccagccctctcccctctggtggcct
gagcactgccaaaacaagagcaagatgaacctgcatcaacaacaagctgacgtctttcac
acactgaaaggcatctatgggactggagagctgccctcaggcacagtgctgggtctgact
gtagatgaccccaggctgactttaccaacaaagaaggttaaagctttgccctgtggaaag
caggcacaagaggtggacgaggagaagtggagggagctgatgttgcgaggagttccagaa
cactgctgtcagagttacctgtgggagcagtctgtgcgggacaacgtcactgataacaag
atatccgagcaggagttgaaccgtatgagaagcgaggtgctggtgccgggctccaggctg
agtcccactccaccgcagggtcgagtccccatcctgctggttcaacagcccggcaagcag
gtgggacatgagatgagctcctggggttctggatgggacctgctgcttcctaaaggatgg
ggcatggccttctgggtcccactggtgtacagaggagttcgcattggagggctgaatatg
agtctgaaacactctcagaataaagcagccccacacttcccccatgattacccagactgc
cctgcaggcgttcattttcaggaggagcaggaggccgagctcctggccaagttcaaaagg
cgtccgcctgcaaaaaggaccaattacattaaacatggctgtctggctccgttctgttgc
ccatggcaacagctggccgaggagtgggagctgatcttgagggaaggaggagaggagagg
aaaggagactgccggagccaaagcccaacagaggctgacagagtgatggaggaggagatg
acatcacagggagatatcagtgtaacgaagcctccgagccgagtcactgtactgaggaac
agaaagtcactgaggctgctctctggttggtgcagacccacaacatctaaaggtcaaagg
ccgtgccgtgtcgcggaactgccacctctcgaccgttcagccatgaccttgtttctcaca
gcacatgggatgagtctggtgtgggtccgtctgtcagtactttgcaagggcaaaccagag
ctcagcgccatggtgtgtgtgccaactgcggaggacctggagctgctgaataaaaagcct
tgcagcagcggcccccaggagcccccacacagagaccacttcaaaagtagaataagaagc
cggaagaagaaccccaaaaaagctgctgcgtcatctttgtcttctgataagactgagggc
aaagactcagaccttccccctgcctctgaaccaaaccccaccacatctgaagaatccaaa
tcatccccccagttttccacggacctcatcttcgggctgtggccggaccctctgccgagc
gtcacctctcactgctcccgggtgactctaggctgggtcactcacggcgacttctccctg
tctacaggctgtggggaagctctgggctttgtcagtgttcccggtttccttaacaccctc
ttcaaccagccgaaggaacacagaggaatgtttctgctgcgcaacccgacatccctgcac
taccgctttgttaaaatcaacatagaggtctga
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