Cottoperca gobio: 115020868
Help
Entry
115020868 CDS
T07513
Symbol
arid1a
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115020868 (arid1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115020868 (arid1a)
03021 Transcription machinery [BR:
cgob03021
]
115020868 (arid1a)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115020868 (arid1a)
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Helix-turn-helix
ARID
115020868 (arid1a)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115020868 (arid1a)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115020868 (arid1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
115020868
NCBI-ProteinID:
XP_029306751
UniProt:
A0A6J2R9I4
LinkDB
All DBs
Position
16:complement(14263431..14279468)
Genome browser
AA seq
2333 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDPKEESVPGEKQSDKKQPGLDSGSPGRGDLQDGDEG
GNAGGGGEPDMKNGNGNPPRANNNNQNDSVGPEGNNHPGLVHHHGTAFPPPSYGYSQHYG
RAPFHQHGGQQSPGMAAAAGPVVQSSNMMEPYQPNSHEHGFSNHQFNNYNPFPNRTPYPG
QAYAMNSPRSTQAPTAGGQPASVKQQPPAGGPTAMAGSYSNQRYNIGNPQPTSTPTLNKL
LTSPSSTRGYPNYPSNDYTSQEGASKGPADMGSSGLYGGSNPGWQQRSLHPSPMSPGSTG
QPLVRNQPPGPVDPMGKMRGQPYGAGSPYSQQSQQGPPTGPQQGPGYPGQGYGPQGPQRF
PLGMQGRSPGAMGSMPYGPQMGSYGQQGPAGYGSQGQAPYYSQPGQAPHPSQQQTPYPQP
SPGQPGGQTPYPGQTHPPPTSAPHTQAGQPYQQPHMPPQSQGPLPGPSQGPPQSQPPYSQ
APAPQSGQSLYAQQQGPPSQGPSSQAPPQPISQEPPGSQGQSNYPGSTQGPQQPPSQQQQ
AQPQPQPPQQPPGHSQHPQGQPAAYQQQQQQQQQQQQQQQQQGQQSPYQRFPPPQQQEVS
QDSFQSTQPKSGPEDGQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNQ
AQSPFSPHTSPHLPGIRGPSPSPAGSPASASTPRTGPLSPANMPGTQMPPRPSSVHSDGS
LHPAMSQSPMAQDRGFMQRNPQMPPYGSPQSASALSPRQSSGGQMHPGIGQYQQNNSMGG
YGQQGGQYGPQGYPRQPGYGNMPNANYTGPGMGPMNAMAGQSGGPPYAGMPPGRMPPHQM
GTRPYGPNMGPNMGPNMGPNMPPNMPPNMPPNMVNMPPQVGSGMCPPPGMNRKPQDPTAM
QHSATNSMHNRMPGYPNMSPGMMGSGPPYGPPMNNMPGMMNTQGGSSYPMGPNMANNSSG
MAPSPEMNNKMNNKVDGSATPKPEPKPKKSNSSTTTNEKITRLYELGPEPERKMWVDRYL
AFIEEKAMPMTNLPAVGRKPLDLFRLYMSVKEIGSMAQVSKNKKWRDLATSLNVGTSSSA
ASSLKKQYIQCLYAFECKIERGEDPPPEIVTDNKKSQAAKVQPPSPASLSTAGSGSLQGP
QTPQSTSSPWLRGGDLKPPTPVSTPHTQMPPVSRSSVNLQDPFSEGSDPAFPRKNMTPNS
AYQSGMNTPDMQGRMGTYEPNKDPFGNMRKVGEHFLPANQGPNSGVGDHQPQQPPQPQQQ
QQQQPPFNRGPPGVMGTMPMGPRQQYPYGPGYDRRSEQGMGPEGNMGSGAPQPNPMIPAN
ADTGMYSPNRFPPQQPRHDSYGNQYPGQGTPPAGSYQNQQPGMYPQQQQGYKRPGEGGYP
PSKRHETEYSGPFHGGQQPPPQQQQQQQQQQQQQQQQQQAGASAPSSGQQESYNQYSGSG
PYPGPDRRPPGPGNQFPFPFGRERMPGATGPNAQPNMPPQMMQSVPEGPQGGMWQGPRDM
NYQNYPNRQGGGPPQGPGYTGMNRSEEMMSSEQRMNHDGQWGGQMGPRQPPYGPAGPGQP
MPRAVQSSYQSLQGVQNHIPQVTSPASMPRPMDSRISPSKSPYMHGVMKMQKAGPPVPAS
HIVPPPVQSPLIRRDMPFPPGSIEASHPVLKPRRRLTVKDIGTPEAWRVMMSLKSGLLAE
STWALDTINILLYDDNSISTFELNTLPGLLELVVEYFRRCLIEVFGILREYEVGDPGQRT
LLDPDALKRDWDSTEGGERAEDMEQEEGEDEDEEEEEEREMERPAHVKEEEKQEQCSDSR
GRDDKTEDEERKSKGSLSEQTGSSQSLAAHERPKQASKFDKFPLKVVRKKDPFTAGQSNN
HGKPQEFDSGLLHWSAGGGDSTDHIQTHFEPRKDFLEPRERICVPSNLLKQRVPEVFLEN
GLQTEEEKRKIQDEEERSKETSSSEMAAVSENASPSLSSEEERKTDSETKTVEKDDKSHQ
ENNGPIPSPDSVFIQKAEQTGTILEDEPHSKDEGPLVGLANWQDSLSRRCVCVSNIVRSL
SFVPGNDHEMSKHPGLLLLLGRLILLHHRHPERKQAPLTYEKDEDSDEGMGQRDEWWWDC
LELLRENTLVTLANISGQLNLSIYPESICLPLLDGLLHWAVCPSAEAQDPFPTLGPHSAL
SPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGNLVRLIGDRKVAVCREMAVVLLA
NLAQGDTVAARAIAVQKGSVGNLMGFLEDSLAATQLQQSQSSLLHLQGMHFEPTSPDMMR
RAARALHALAKVEDNHSEFTLQESRLLDLSVSPLMNSLVSHVICDVLFLVGQS
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactcttaacactagcccgccttccgaactcaaa
aagccggatcgagaccccaaggaggagtcggtaccgggggagaagcagtcagacaaaaag
cagccgggcttggacagcggatcgccgggccggggggatctgcaggacggggacgaaggt
ggaaatgcagggggaggaggggaacctgatatgaagaacgggaatgggaacccgcccagg
gctaacaataataaccagaacgactctgtcggaccggagggaaataaccatcccggtttg
gtgcatcaccacggcaccgcgtttcctcctccttcgtacggatatagtcagcactacggc
cgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcgggt
ccggtcgtgcagtcgagcaacatgatggagccgtatcaacctaattcacacgagcatggc
ttttctaaccaccagtttaacaattataacccgttcccgaacaggactccctatcccggc
caagcgtacgccatgaactcccctcgcagtacccaggcgccgacagctggggggcagcca
gctagcgttaagcagcagccaccagcgggaggacctacggcgatggctggatcttacagt
aaccagagatataacattggaaaccctcaacctacatccacaccgacactcaacaagctc
ctaacctcccctagctcaacgcggggttatccaaactacccgtctaacgactacactagc
caggagggagctagtaagggaccagcagacatgggcagcagtgggctgtatggagggagc
aacccgggttggcaacaaagaagccttcacccgtcgcctatgagcccgggaagtaccggg
cagccgctagttagaaaccagccacctggtcctgtggacccaatgggaaaaatgagaggt
caaccatatggagcaggcagtccatatagtcagcagtcacagcaggggcctcccacaggt
ccacaacaggggcccggttaccctggccagggttatggccctcaaggtcctcagcgattc
ccattaggaatgcaaggacgttcccctggagccatgggtagcatgccgtatggacctcag
atgggatcttatggacaacagggaccagccggctatggctctcagggccaggccccatat
tacagccagcctggccaggctcctcacccgagccagcagcaaaccccctacccccagccc
tcaccaggacaaccgggtggccagacgccttacccagggcaaacccaccctccgccgact
tctgctccacacacccaggcaggacaaccctatcagcagccccacatgcccccacaatcc
caggggccactgccaggcccgtcccaagggcctccacagtcccagcccccttattcccaa
gccccagccccacaatctggccagtctctgtacgcccagcagcagggccctccgagtcag
ggcccttcgagtcaggccccgccgcagccaatttcccaggaaccccctggatcacagggc
cagtccaactacccaggatccacacagggtcctcagcagcccccttcgcagcaacagcag
gcacagcctcagcctcagcctccacaacagccaccgggacacagccaacacccacagggc
cagcctgcagcgtaccagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcaagggcaacagtcaccttatcagcgatttcctcctccacaacagcaggaggtatcc
caggactcatttcagtccacgcagcctaaatctggcccagaggacggtcaaggccgcccc
tccagccttccggacctgtcggggtccatcgatgacctgcccacgggtacagagggcgcc
ctgagtcccggtgtcagcacgtcaggtgtgtcgagcagccagggcgagcagagtaaccag
gctcagtcgcccttctctcctcacacatctccccacctgccaggtatccgagggccttca
ccttcgccagctggctcccctgccagtgccagcacgccccgcacaggaccgctgtcaccc
gccaacatgccagggacccagatgcctcccaggccatcaagtgtgcattcagatggaagt
ctacaccccgcaatgagccagtcccctatggcccaggacagagggtttatgcagagaaac
cctcagatgcccccttatggatccccccagtcagcctctgcactgtccccacgccagtcc
tcagggggacagatgcatcctgggataggccaatatcagcagaacaactccatgggtggc
tatggacagcaggggggacaatatggcccccaaggttatccccggcaacctggctatggc
aacatgcccaacgcaaattacaccgggccgggcatgggcccaatgaacgccatggcagga
cagagtggggggccgccgtatgctggcatgccaccaggaaggatgcctcctcatcaaatg
gggacacgtccctatggcccaaatatgggccccaacatgggtcccaacatgggccccaac
atgcctcctaacatgcctcctaacatgcctcctaacatggtcaacatgccaccccaggta
ggctcaggaatgtgtcctcctccaggcatgaacagaaagccccaggaccctactgccatg
cagcactctgccaccaactccatgcacaacaggatgcctggttaccccaacatgtctcca
ggcatgatgggctccggcccaccctatggccctcccatgaataacatgcctggaatgatg
aacactcaaggtggatcatcttatcctatggggccgaacatggccaataactcaagtggt
atggcccccagtccagagatgaacaacaagatgaataacaaagtagatgggagtgcaacg
cccaagccggagcccaaacctaagaagtccaactcttccaccacaaccaatgaaaagata
acccgtctgtatgagttgggaccggagccggagagaaagatgtgggtggaccgttatttg
gccttcatagaagagaaagccatgcccatgaccaacctgcctgctgtaggacgtaaaccc
ctcgacctcttccggctgtatatgtcagtcaaagagatcggaagcatggcacaggtgagt
aagaataagaaatggcgtgatctggccacttccctgaatgtgggtacatccagcagtgct
gccagttctttgaagaaacagtacatccagtgtctgtacgcctttgagtgcaaaattgag
cgtggcgaggaccctcctccggagattgtcacagacaacaaaaagagccaagccgctaag
gtccagccaccctctccagcgtccctctccacagctgggtcaggctctctgcagggtccg
cagacaccccagtccaccagcagcccatggctgagggggggggacctaaaacctcccacc
ccagtctccactcctcatacacagatgccacccgtgtccaggagcagcgttaacctgcag
gacccattctctgaaggaagtgaccctgctttccccaggaaaaacatgactcccaactcc
gcctatcagtctggcatgaacacaccggacatgcaagggcgcatgggcacctacgaaccc
aacaaggacccctttggtaacatgcggaaagtcggggagcactttctacctgctaaccag
ggccctaacagcggggtgggtgaccatcagccacagcaaccgccacaaccacaacaacag
cagcagcagcagcctccattcaacagaggaccgcctggggtcatgggcacgatgccaatg
gggcccaggcagcagtatccctatggaccaggctacgacaggagatcggagcaaggaatg
ggcccagagggcaacatgggatccggtgctcctcagccaaaccctatgatacctgccaac
gccgacacagggatgtattcgccaaatcgcttcccaccacagcagccacggcatgattcc
tatggtaatcagtatcctggacagggaacgccccctgcaggctcctaccaaaatcagcag
cctggaatgtacccacaacaacaacagggttacaagcgtcctggggaagggggttatcct
ccatcaaaacgtcatgagactgagtacagtgggcctttccatggtggacagcaaccacct
ccgcagcagcagcaacaacagcagcagcagcagcaacaacagcagcagcagcagcaagca
ggtgcctctgcaccctcttcaggacagcaagagtcgtacaatcagtacagcggcagcggg
ccctaccctggccctgatcgccgtccacctggcccaggcaatcagttcccctttcccttt
ggtcgtgaacgtatgccgggtgcgacagggcccaacgctcagcccaacatgccccctcag
atgatgcagtcagtccctgagggtcctcagggaggtatgtggcaggggccgcgagacatg
aactatcagaactaccccaaccggcagggcggcggcccaccccagggacctggttacact
ggcatgaaccgctcagaggagatgatgtcgtcagaacagcgcatgaatcatgatggccag
tgggggggtcagatgggccctcggcagcctccttatggtccagcagggcctggccaaccc
atgcctcgcgctgtacagtccagctaccagtcccttcagggtgtgcagaaccacattcca
caggtgaccagcccggcctccatgccccgccccatggatagcaggatatcacccagtaaa
tctccctatatgcacggagtcatgaagatgcagaaggccggccctccagtacctgcgtct
cacatagtgccccctccggtgcagtcgcctcttataaggagagacatgcctttccccccg
ggctctatagaagcttcccatcctgtcctgaaaccacgtcggagactcaccgtgaaagat
atcggaactccggaggcctggagagtcatgatgtcattaaagtctggtttgttggctgag
agtacgtgggccttagataccatcaacatcctcctgtatgatgacaacagtatttccacc
tttgaactcaacacgttgcccggcctactagagttggtggttgagtatttcagacgctgc
ctcattgaagtctttggcatcctgcgggagtatgaggtgggagaccctggccagaggact
ctacttgatcctgatgctttgaaacgagactgggacagcacggaaggaggggagcgggct
gaggacatggaacaagaggaaggggaggatgaggacgaagaagaagaggaggaacgagaa
atggagaggccagctcatgtgaaagaggaggaaaaacaagagcagtgctctgattctcgg
ggtcgagatgataagacagaagatgaggagaggaagagcaagggttccttatctgaacag
acgggctcatcacaatccttagctgcccatgagagacccaaacaggccagcaagtttgac
aagtttcccctgaaggtggtacggaagaaagacccattcacggctggccagtccaataat
cacggcaaaccacaagagtttgacagcgggttacttcattggagtgctggaggaggagac
tcaacagaccacatccagactcactttgaaccacgcaaagacttcttggaaccacgagaa
cgaatatgtgtgccctcaaatttgctgaagcaacgtgtcccagaagtgttcctggaaaat
ggtttgcaaactgaagaagagaaaaggaagatccaggatgaagaagaaaggtcaaaagag
acatcttcctcagagatggcagcagtatctgagaatgccagcccctcactcagcagtgag
gaggagaggaaaacagattctgagacaaaaacagttgagaaagatgataaaagtcaccag
gagaacaatggacccattccttcccctgacagtgttttcatccagaaggctgaacagact
ggcaccatcctggaggatgagcctcacagtaaagacgaggggcctctcgtcggtctggct
aactggcaggattctttatcccgccgctgcgtttgtgtctccaatattgtccgcagcctc
tcctttgtgccaggcaacgaccacgagatgtccaaacatccagggctactgcttctgctg
ggccgcctgatcctgctccaccacaggcaccctgagcgcaaacaagctccgctcacctac
gagaaagatgaggattcagacgagggtatgggccaaagagatgaatggtggtgggactgc
ttggagctgctgagggagaacacactggtcactttggcgaacatctcaggccaactgaac
ctctccatctaccccgagagcatctgcctgcctctgttggatggtcttctccactgggct
gtgtgcccttcagcagaggcccaggacccgttccccacccttggcccccacagtgctttg
tcacctcagagactggtgctggagacgctaagcaaactaagcatccaagacaacaatgtg
gacctcatcttggccactccgccattcagtcggttggagaagctatacgggaacctggtg
cggctaatcggagacaggaaggttgcagtctgcagggagatggccgtggtcctgttggcc
aacctggcccagggtgatactgtggcagcccgagcaatcgcagtgcagaaaggcagcgtg
ggcaacttgatgggcttcctggaggatagtctggcagccacacagctccagcagagccag
agctctctactacacctacaggggatgcacttcgagcccacaagcccggacatgatgcgg
cgagctgcccgggctctgcacgccttagccaaggtggaggacaaccactcagagttcaca
ctacaagagtcccgactcctcgacctttcagtgtctcccctaatgaactcgctggtttct
catgttatctgtgacgtactctttttggttggccagtcatga
DBGET
integrated database retrieval system
