Cottoperca gobio: 115021018
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Entry
115021018 CDS
T07513
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cgob
Cottoperca gobio
Pathway
cgob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115021018 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115021018 (prpf31)
Spliceosome [BR:
cgob03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115021018 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
115021018
NCBI-ProteinID:
XP_029306991
Ensembl:
ENSCGOG00000017639
UniProt:
A0A6J2RA54
LinkDB
All DBs
Position
16:9674009..9680022
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AA seq
508 aa
AA seq
DB search
MSLADELLADLEEAGDEGEEGLYPEEEEGESDGEATQGRTEGLLEDIPEEMEVDYSKAES
VASIAKLRNSKQFSEIMDKITLYSGKQRKNLEVSGPVESDPEYRLIVAANNLTVEIDNEL
SIIHKFTRDKYSKRFPELESLVPDSLDYIRTVKEFGNNLEKCKTNETLQQILTNATIMVV
SVTASTTQGSLLSEDELKQLEEACDMALELNQSKHRIYDYVESKMSFIAPNLSVIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSAALLPHTGYIYHCDVVQSLPPDL
RRKAARLVSAKCTLAARVDSFHESSVGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKEAKM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggacgagctcctggcagatttggaggaggccggagatgagggagaggaa
gggttgtatccggaggaagaggagggggagagtgatggtgaggcaacgcagggaaggaca
gagggactgctggaagacatcccagaggagatggaggtcgactacagtaaagctgaaagt
gttgcgtccattgccaagctccgcaatagcaagcagttttcagagattatggacaaaatt
acactgtatagtggaaagcagcgcaagaacttagaggtctcgggtccagtcgagtctgac
ccagaatacagactgatcgttgcggccaataatctcaccgtggagatcgacaatgagctc
agtatcattcacaagtttactcgggacaagtactccaagaggttcccagagctcgagtct
ctggtgccagattctctagattacatccgcacagtcaaggaattcggaaacaatctggag
aagtgcaaaaccaatgaaactctgcagcaaatcctcaccaatgccactattatggttgtc
agtgtcacagcctcgaccacacagggatcgctgctaagtgaggatgaactgaagcaactg
gaggaggcttgtgacatggctctggagctgaatcaatccaaacacaggatatatgattat
gtggagtccaaaatgtcattcattgccccaaatctgtccgtcattgttggagcgtcaaca
gctgccaagatcatgggaatcgctggaggcctcactaacctctccaagatgcccgcctgt
aacctgatgctgctgggagctcagagaagaaccctgtctggcttcagcagcgccgccctg
ctgccccacaccggctacatctaccactgtgatgttgtgcagtcgctgccacctgacctc
aggaggaaggcagctcgtctggtatctgcgaagtgcactctggctgcccgagtggacagt
ttccatgagagttcggttgggaaggttggctacgatctaaaagaagagatagagaggaag
tttgataaatggcaggagcctccgccagtgaagcaggtcaaaccgctgccagccccgctg
gacggacagaggaagaagagaggaggaaggagatatcgaaagatgaaggagcgtctcgga
ctgactgagatcaggaaacatgctaacaggatgacctttgcagagattgaagacgatgcg
tatcaggaggacctgggcttcagtctgggtcagctggggaagagtggcagcgggcgcgtc
aggcaggctcaagtcaatgaggccaccaaggccagaatctccaaatccctccagaggacg
ttgcagaagcagagcatgacatacggaggaaagtccacagtcagagaccgctcctcagga
accagctccagtgtagcgttcactcctcttcagggactggagatcgtgaacccacaggct
gcggagaagaaggtggctgaagccaaccagaaatacttctccaacatggcggagttcctc
aaagtcaagaaggaagctaagatgtga
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