Cottoperca gobio: 115021180
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Entry
115021180 CDS
T07513
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cgob
Cottoperca gobio
Pathway
cgob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115021180 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115021180 (cnot3)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115021180 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115021180 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
115021180
NCBI-ProteinID:
XP_029307258
Ensembl:
ENSCGOG00000017752
UniProt:
A0A6J2R8Z0
LinkDB
All DBs
Position
16:complement(9681092..9689524)
Genome browser
AA seq
912 aa
AA seq
DB search
MADKRKLQGKTVGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQ
RLRDQIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDP
AQREKEETGQWLTCTIDTLNMQVDQFESEVESLSVQTKKKKGDKDKQDRIEELKRLVERH
RFHIRMLETILRMLDNDSIPVDSIQKIKDDVDYYIDSSQDPDFEENEFIYDDLDLEDIPL
VATSPSGQGNVEDEMYLHSNSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQ
SPVKNGTPSLLSSFSSSSTSGSSSSSSLVSMASVVGSIPVVPISSSLMGSFSSAVQQHQH
QPAQQQQQPQPPNQPQQQQQQQPPQTKPSVPSNNTPSLPSNPLLPALTAPSLPAPSTPTS
SAPYSQSQLISVPTPASSLGLGLGLGLSKIGLSVTSSPNQMSALGLGGHPSPLNKMAALI
SGFIPAPYAQAAASGSLGLSSITQSSISIESSTSISTSGSSGVTTNGGGIGLGLLGSSPA
HNSLSASILGLVPGQNVAPGSSQLPPSSVSTSPGIVGMMGGIGGNVGMIGGVGVNAAPAR
PPSGLKQNGSTSYSAVVAESSAESALSTPSQSQSSQPSSLSSSTSQPMDNGPSLISSITL
PPSSPSPSFSDSTPGGVSLLNGPHSYTQASEALKAPEPLSSLKAMAERAALGSGLDGEIP
NLHLTDRDIFSSSSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQESA
WTHMPHPSDSERIRQYLMRNPCPTLPFHHQIPPHHSDSIEFYQRLSTETLFFIFYYLEGT
KAQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFT
FEYRYLEDRDLQ
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtaagactgttggtgagatcgacagatgtttgaaa
aaagtagctgaaggtgtagaacagtttgaagacatctggcaaaagctccacaatgcagcc
aatgcaaaccagaaggaaaaatatgaggctgacctcaagaaagagataaaaaaactacag
cgattgagagatcagataaaaacatgggtggcctcaaatgagatcaaagacaaaaggcag
ctagttgaaaaccgcaaacttatagagacgcaaatggagcggttcaaggtggtggaacgt
gaaacaaaaacaaaagcctactctaaagaaggcttggggctcgctcagaaagtggatcca
gctcagagggaaaaagaggaaacgggacagtggctaacatgtacgatagacactctaaat
atgcaggtggatcagtttgaaagtgaggtggaatctctttcagttcaaacgaaaaaaaag
aaaggcgataaagataagcaggatcgcattgaagagctcaagcggttggttgaaagacat
cgattccacattcgcatgttggagaccattttacgaatgctggataatgactcgatacca
gtggattcaatccagaagatcaaggatgatgttgattactacattgattcctcccaagac
ccggactttgaggagaatgagttcatctacgacgacttagacctggaagacatcccatta
gttgcaacttctccgtcaggtcagggcaatgtggaggatgagatgtatctccactccaac
agcactcccacttccacaacctcctcttcacccattcctccatccccggccacttgcact
gctgagaactcagaggacgataagaaaaggggacggtcgacagacagtgaagttagtcag
tcacctgtgaagaacggcaccccatccttgctatcttccttctcttcctcctccacttct
gggtcctcctcatcctcctctctcgtgtccatggcgagtgttgtcggaagcattcccgtg
gttcccatcagcagcagtctcatggggagtttcagcagtgcggtgcagcaacatcagcat
cagcctgcacaacagcagcaacaacctcagccaccaaaccaaccgcagcaacaacaacag
cagcagccacctcagacaaaaccctctgtcccctcaaacaacacccccagcctgccgagc
aaccctcttctaccagccctgactgccccctctctccccgcacccagcacacccacctca
tcagcaccctactctcaatctcagctcatatctgtgcccaccccggcatccagtttggga
ctcgggctggggctgggattgagcaaaattggcctgtcggtgaccagcagtcccaaccaa
atgtctgctttgggcctgggtggccacccatctcctttgaacaaaatggcagcgctcatt
tcaggcttcatacctgccccgtacgctcaggcagcagcatcaggaagcttgggtttgagc
agcatcactcagtccagcatttccatagagagcagcacttccatctccacctctggctcc
agtggagtcaccaccaacgggggggggattgggctcggtttgctaggttccagcccggcc
cacaactctttaagtgcgagtattctgggtctggttcctgggcaaaatgtagctcccggt
tcctctcagctgcctccaagttctgtcagcacttcccccggaatagttggcatgatggga
ggcattggagggaatgtcggcatgattggaggagtaggggtgaatgctgctcctgcacga
ccgcccagtggattgaagcaaaacggaagcacaagttacagtgctgtagtggcagagagc
tctgcagaatccgctctaagcacaccgagccagtcgcaaagcagccagccctcatctctc
agttcttcaaccagtcagccgatggacaatggtcccagtttaatcagctccatcacgctg
cctcccagctctccgtccccctcgttctcagacagcacacccggaggagtgagtcttctc
aacggaccgcactcctacacacaggcctctgaggccctcaaggcccctgagcctctcagt
tctctgaaggcgatggctgagagagcagcgctgggatcaggcctggatggagagattccc
aacctgcacctaactgacagagatatcttctctagctcatctgcagcgcccggcacacct
gccgcacctcagccgtccgtgtcggaagtcagcattcccccctcgctaggggtctgtcca
cttggccccacccctctccccaaagaccagctctaccagcaggccatgcaggaatctgca
tggacacacatgccacacccctccgactctgagaggatcaggcaatacctgatgaggaat
ccgtgtcccacgttacctttccaccatcagataccgccgcaccactctgactccatagag
ttctaccagagactgtccacagaaacgctctttttcattttctactacctggagggcacc
aaggctcagtatctgtctgccaaggctctgaagaaacagtcatggaggtttcacacaaag
tacatgatgtggttccagaggcacgaggagcccaagactatcacagacgagtttgaacag
ggcacttacatttactttgactatgagaaatggggccagaggaagaaggagggattcacc
ttcgagtacaggtacctcgaagaccgagacctgcagtga
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