Cottoperca gobio: 115021303
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Entry
115021303 CDS
T07513
Name
(RefSeq) endoribonuclease ZC3H12A-like isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115021303
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
115021303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
115021303
NCBI-ProteinID:
XP_029307510
Ensembl:
ENSCGOG00000013293
UniProt:
A0A6J2RDV9
LinkDB
All DBs
Position
16:complement(4654668..4661038)
Genome browser
AA seq
673 aa
AA seq
DB search
MSCSLTCRPVSGGNVPLETYLSPSMNPAEAVKHVFLATDKKPRCSRMDQAFPSESSASDL
FDPDSEELQLGVDFFKKLGYSSAEVKAALSKLGLSTDTNSVLGELVRSRTGAAPCMFSSD
SDERSTAQKDPLLPASWAFGPCRITPRLADQKNTELRPIVIDGSNVAMSHGNKEVFSCRG
IQLAVNFFLDRGHNTITVFVPTWRKEQPRPDAPITDQHVLMDLEKRKIVVFTPSRRVGGK
RVVCYDDRFIVKVAYESDGVIVSNDTYRDLQGERPEWKKCIEERLLMFSFVNDKFMPPDD
PLGRHGPSLDNFLRKKPLPTEQKRQLCPYDKKCTYGIKCKFYHPERSNQSYLSLADELRE
KAQISTVKEERNARLSPRQPQSDPSHNAFPHPQDSNTEHTRDQQSSSHPSQVRENTQLYW
EDPRKSPNHNPCPVTGSQCQTEWPGLHSMPSHYYANISHEYLDSGFGSYDSQYSDFSHCL
SNSHRLRPQQLNALAGPRHAPVHLENKNTSQPCSCCSRVVPSTVYQQHHGNPDSKGQPKY
DSYPPRMFPPGVPHQNSLPTHLHYSGSPHHQQNYWSDPFQGMPQARTSCSVPSSAHSSNS
PSCSYKGQQYQSWGPQHASPTAFDPQRLELRKKLQAIFNPHQVDTVMEMFPHVMNAEKLA
AEILNLKAQRGIF
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagctgttccctaacctgccggcctgttagcggtggaaatgtcccgttggaaacttac
ctgagtccgtcgatgaatcccgctgaggctgtgaaacacgtcttcctcgctactgataag
aagcccagatgctctaggatggatcaggcatttcccagcgagagctcagcgtccgacctg
ttcgacccggacagtgaggagctccagctcggtgtggacttctttaagaaactgggttac
tcctccgcagaggtcaaggctgctctgagcaagctgggcctgagcacagacacaaactcg
gtgctgggagagctggttcggagcaggaccggtgctgcaccgtgcatgttcagttctgac
agtgacgagaggagcacagcccaaaaggaccctctgctgcctgccagctgggcttttgga
ccctgcagaatcacaccgcgactagcggaccaaaaaaacacagaattgaggccgattgtt
attgacggcagcaatgttgccatgagtcatggcaacaaggaagtgttctcatgtcgaggc
atccagctcgcagtcaacttcttcttggacagaggtcataatactattactgtgtttgtt
cccacttggcgcaaagagcagcccagacctgatgcccccataacagatcaacacgtcctg
atggaccttgaaaaacggaaaatagtggtcttcactccatcgcgccgcgttggtggtaag
cgtgtggtttgctatgatgaccgctttatcgtcaaggtggcgtatgagtccgatggagtg
atcgtatccaatgacacctaccgtgacctccagggagaaagacccgagtggaagaaatgc
atcgaggagaggctcctcatgttctcctttgtcaatgacaagttcatgcccccggatgac
cctctgggtcgccatggccccagtcttgacaacttccttcggaaaaagcctctgcctaca
gagcaaaagaggcagctctgtccctacgacaaaaagtgcacttatggaatcaaatgtaag
ttctaccatccagagcggtcaaaccagtcctacctgtccttggctgatgaattgagggaa
aaagcccagatttctactgtaaaagaagaaagaaatgccagattatcacccagacagcct
cagtctgatccttctcacaatgcctttccccatcctcaagactctaacacagagcacaca
agagaccagcaaagttcttcacatcccagtcaggttcgtgagaatacacagctgtactgg
gaggaccctagaaaaagtcctaatcataatccctgtcctgtaacaggaagccagtgtcag
acagagtggcctgggctgcactccatgcccagtcattactatgccaacatctctcacgag
tacctggattctggctttggctcttatgacagtcagtactctgacttttctcattgcctc
agcaactcccacaggctcaggccccagcagctgaatgccctcgctggacccagacatgcc
ccagtgcatttagagaacaaaaacaccagccagccttgcagctgctgttcccgcgtagtg
ccctcgacagtttaccagcagcatcatggaaacccggactccaagggtcaacccaagtac
gacagctaccctcctcgcatgttcccgccgggtgtgccacaccaaaacagcctccccact
catctccattacagtggatccccgcatcatcagcaaaattactggtcagatccatttcag
gggatgccccaagcccggacatcatgtagcgtcccctcttcggcccactcctcaaactcc
cccagctgctcttacaaaggccagcagtaccagtcctggggcccacagcatgcatcgccc
actgcgtttgacccacaaaggttagagctccgcaagaagctgcaggccatcttcaacccg
catcaggtggatacagtcatggaaatgttcccacatgtgatgaatgcggagaaactggct
gcagagatcctcaacctgaaggctcagagggggatattctga
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