Cottoperca gobio: 115021543
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Entry
115021543 CDS
T07513
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cgob
Cottoperca gobio
Pathway
cgob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115021543 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115021543 (prpf3)
Spliceosome [BR:
cgob03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115021543 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF2729
HTH_68
TPX2
Motif
Other DBs
NCBI-GeneID:
115021543
NCBI-ProteinID:
XP_029307912
Ensembl:
ENSCGOG00000005098
UniProt:
A0A6J2RER9
LinkDB
All DBs
Position
16:complement(10089077..10096088)
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AA seq
701 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEALEESRSARGNKGAGEKHRKRDLKDVFGDEAETGAVRETPESVDGTAPKRKR
VPRFEEVEEPEVIPGPPAESPGMLTKMQIKQMMEAATKQIEERKKQLSFSSPVVAVQLET
PPISRLLGTSAAAAAGVASSIAPSQAASFMNDAIEKARKAAELQARIQSQLALKPGILGA
LGNTGPHNLVALANLHAMGIAPPKVEIKEVNKPTPLILDDKGRTVDASGKEVELTHRMPT
LKANIRAVKREQFRQQLKEKPGEDLESTSYFDQRVTITPAQRPRRGFKFHDQGRFEKIAQ
RIRTKAQLERLQCEIAQAAKKTGIQASTKLALIAPKKDIGDGQVPNIEWWDSYILPTNVE
LTPATIFHELPLFGVTNLVEHPAQINPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQKE
VQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEDANAARK
LTAEQRKEKQVKRLKEDLTNGVHIAVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHRDV
NLVVVEGGPKSQKKFKRLMLHRIKWVEHNSKRDDPDGDDDTKRNNKCWLIWDGTAKERSF
GEMKFKQCPTENMAREHFKKHGTEHYWDLALSKSVLDSTDD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaagcgggaggtggaggagttgaggccatgggtggagcgaactgtgaag
aaggtgctgggtttctcagagcccacagtggttactgctgctttgcactgtgttggaaag
ggactagacaaaaggaagaccatagaccagctgcgtcccttccttgatgactctgcggga
ggttttgtggagcgtctttttgaagctttagaggaaagccgcagtgctcgtggcaacaaa
ggagcaggagagaagcaccgaaagagggacctcaaggatgtatttggtgatgaagctgaa
acgggtgcagtgcgagaaactccggagtcagtggatggaaccgcaccaaagaggaaacga
gtccctcgcttcgaggaggtagaggagcccgaggtcattcctggtcctccagccgagagc
cctggcatgctcaccaaaatgcagatcaaacagatgatggaagcagccacaaaacagata
gaggagaggaagaaacaactgagcttttcctctccagtcgtcgctgtacaacttgaaacc
cctccgatctcgcggcttcttggcacgtccgctgctgcagctgcaggcgtggcttcatct
atcgccccctcccaggctgccagcttcatgaatgacgctatcgagaaggcccgcaaggct
gctgagctacaggcccgcatccagtcccagttagccctgaaacctggtatcctcggtgcc
ctgggaaacactgggcctcacaacctcgtggcgctagctaatctacacgcaatgggaatt
gccccaccgaaagtagaaatcaaggaggtgaacaagccaacgcctcttattctggatgac
aagggaagaacagtggatgccagtggcaaagaggttgaacttacacaccgcatgcccaca
ctgaaagcaaacattcgagcggtaaagagggagcagttccgtcagcagctgaaagagaag
ccaggggaggatttggagtccacgtcctacttcgaccaacgtgtgactattacaccggct
cagcgccctcgcagggggtttaaattccatgaccaggggcgattcgagaagattgctcag
agaattagaactaaggcccagttggaaaggttgcagtgtgagattgcccaggcagcaaag
aagacaggaatccaggcatccactaaactggcactgattgcccctaagaaagatattgga
gatgggcaggtgcccaacatcgagtggtgggactcctacatcctgcccaccaatgtagaa
ctaacacccgccacaatatttcatgagttgccgctgtttggtgtgaccaacctggtcgaa
catcctgcccaaattaaccctccagttgacacagataagccggtaacactgggtgtatac
ctgacaaagaaagaacagaagaaattgagaagacagacacgaagggagggacaaaaagaa
gttcaagagaaggttcgtcttggactgatgcctccaccagaacccaaagtgcgtatctcc
aacctgatgagagtgctgggcacggaggcggttcaggatccgacgaaggtagaggcccat
gtcagagcgcagatggccaagagacagaaggctcatgaggatgccaatgcagcccgcaag
ctcacagcggagcagaggaaagagaagcaggtcaagaggttaaaagaagacctcactaat
ggcgttcacattgcagtgtacaggatccgtaacctgcaaaatcctgcgaagaagtttaaa
gtggaggccaatgccaaccagctgtacctgacgggcacagtagttctgcacagagatgtc
aaccttgttgtggtggagggagggcctaaatcccagaagaaattcaagaggctgatgttg
cacagaatcaaatgggtggaacacaacagtaaaagagatgatcccgatggtgatgatgat
acaaagaggaacaacaagtgctggttgatttgggatggcacagctaaagagcgtagtttt
ggggagatgaagttcaagcagtgccctacagagaacatggccagagaacacttcaagaaa
cacggcacagaacactactgggatctagctctgagcaagagtgtgttggacagcacagat
gactga
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