Cottoperca gobio: 115021592
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Entry
115021592 CDS
T07513
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
cgob
Cottoperca gobio
Pathway
cgob03320
PPAR signaling pathway
cgob04148
Efferocytosis
cgob04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115021592
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115021592
03320 PPAR signaling pathway
115021592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115021592
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgob03310
]
115021592
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115021592
Nuclear receptors [BR:
cgob03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
115021592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
115021592
NCBI-ProteinID:
XP_029307978
Ensembl:
ENSCGOG00000005542
UniProt:
A0A6J2RAX1
LinkDB
All DBs
Position
16:complement(12967930..12976537)
Genome browser
AA seq
444 aa
AA seq
DB search
MSSQQPNSSASNSPTNILGSPFSVISSSLNSPVVSPSLGFGPISNSQISSSAPISGMHSI
SSSEDIKPPFGLRPMPSHSPGIMLSQKRMCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVIKHVKWIKEDGKDEGWMTVQE
ERQRNREREGELEFSVGVNEEMPVEKILEAETAVEQKTELHSDGGSAGNSPHDAVTNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIGLKDGVLLASEL
QRDNAHSAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNP
DAKGLSNTGEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacagcaacccaacagttcagcctccaatagccccaccaacatcttgggttct
ccattctcagttatcagttcctcactgaactccccagtggtttcaccctctctgggattc
ggacccatcagcaacagtcagatctcttcttcagcacccatatcagggatgcactcaatc
agcagctcagaagatatcaagcctccttttggcctgaggcccatgccatctcacagccct
ggaataatgttgtctcagaaacgcatgtgtgtcatctgtggagaccgctcttctggcaag
cactatggagtgtacagctgtgagggttgcaaaggtttcttcaaacgaactgtgcgcaaa
gaccttagctatacctgcagagataacaaagagtgcctggtcgacaaacgccagcgcaat
cgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagagggaagtgatc
aaacatgtaaagtggataaaagaagatggaaaagatgagggatggatgacggtccaggag
gagcgtcagaggaacagagagcgtgaaggagagctggagttcagtgtcggcgtgaatgag
gagatgcccgtcgagaagattttggaggcagagacggctgtggagcagaagacggagctt
cactctgatggcggttctgcaggcaactctccccatgatgcagttaccaacatctgccag
actgcagacaaacaactgtttgccttggttgagtgggcaaagagaatccctcatttctct
gaacttcccctcgatgaccaggtcatcctcctgcgtgcagggtggaatgagctcctcatc
gcctcgttctcccatcgctccatcggtttgaaggatggagttctcctggcctctgagctg
cagcgcgacaatgcacacagcgcaggagttggagccatttttgacagggagagtgtgcag
agtgcagaggtcggcgccatatttgacagggttcttacggagctcgtcaataaaatgaga
gatatgcaaatggacaaaacagagctgggttgcctccgagccatcgtcctcttcaaccca
gatgctaaagggctctccaacaccggtgaggtggagctccttagagaaaaggtctatgca
tcattggaagcctattgcaaacagaaatatccagagcagcagggaaggtttgcaaagctc
ctcctgcgactgccagcactgcgatccatcggcttgaagtgcttggagcatctcttcttc
ttcaagctgatcggcgacacacctattgacactttcctcatggaaatgcttgaagctccc
catcagttgtcttag
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